RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 FRMD5Q7Z6J6 570 aa15.36■□□□□ 0.05
SDC2-203ENST00000519587 ZNF598Q86UK7 904 aaKnown RBP15.36■□□□□ 0.05
SDC2-203ENST00000519587 DHX40Q8IX18 779 aaKnown RBP15.36■□□□□ 0.05
SDC2-203ENST00000519587 ABI1Q8IZP0 508 aa15.36■□□□□ 0.05
SDC2-203ENST00000519587 CEP120Q8N960 986 aa15.36■□□□□ 0.05
SDC2-203ENST00000519587 CNOT6LQ96LI5 555 aaKnown RBP15.36■□□□□ 0.05
SDC2-203ENST00000519587 MED15Q96RN5 788 aa15.36■□□□□ 0.05
SDC2-203ENST00000519587 FNBP1Q96RU3 617 aa15.36■□□□□ 0.05
SDC2-203ENST00000519587 RSAD1Q9HA92 442 aa15.36■□□□□ 0.05
SDC2-203ENST00000519587 SNTG2Q9NY99 539 aa15.36■□□□□ 0.05
SDC2-203ENST00000519587 HES2Q9Y543 173 aa15.36■□□□□ 0.05
SDC2-203ENST00000519587 TDRD15B5MCY1 1934 aaKnown RBP15.35■□□□□ 0.05
SDC2-203ENST00000519587 TRIP11Q15643 1979 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.35■□□□□ 0.05
SDC2-203ENST00000519587 STX10O60499 249 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 ATF7P17544 494 aaPredicted RBP15.35■□□□□ 0.05
SDC2-203ENST00000519587 TNFSF9P41273 254 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 MTIF2P46199 727 aaKnown RBP15.35■□□□□ 0.05
SDC2-203ENST00000519587 CASP4P49662 377 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 FAM189BP81408 668 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 BFSP1Q12934 665 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 PSMD6Q15008 389 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 IQCB1Q15051 598 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 ENOX2Q16206 610 aaKnown RBP15.35■□□□□ 0.05
SDC2-203ENST00000519587 TCTN1Q2MV58 587 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 LRIT3Q3SXY7 679 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 SEZ6Q53EL9 994 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 TMEM240Q5SV17 173 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 ZBTB41Q5SVQ8 909 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 OTOP2Q7RTS6 562 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 RTN4RL1Q86UN2 441 aaPredicted RBP15.35■□□□□ 0.05
SDC2-203ENST00000519587 LUZP1Q86V48 1076 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 RDH13Q8NBN7 331 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 URGCPQ8TCY9 931 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 TMC2Q8TDI7 906 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 HERVK_113Q902F9 699 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 VWCEQ96DN2 955 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 FAM212AQ96EL1 285 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 EEF2KMTQ96G04 330 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 SNX27Q96L92 541 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.35■□□□□ 0.053e-15■□□□□ 8.8
SDC2-203ENST00000519587 ASB7Q9H672 318 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 FANCLQ9NW38 375 aa15.35■□□□□ 0.05
SDC2-203ENST00000519587 KCNJ18B7U540 433 aa15.34■□□□□ 0.05
SDC2-203ENST00000519587 TULP1O00294 542 aaPredicted RBP15.34■□□□□ 0.05
SDC2-203ENST00000519587 XPOTO43592 962 aaKnown RBP15.34■□□□□ 0.05
SDC2-203ENST00000519587 ADRB2P07550 413 aa15.34■□□□□ 0.05
SDC2-203ENST00000519587 CDK11BP21127 795 aaKnown RBP15.34■□□□□ 0.05
SDC2-203ENST00000519587 AKAP5P24588 427 aa15.34■□□□□ 0.05
SDC2-203ENST00000519587 MARSP56192 900 aaKnown RBP15.34■□□□□ 0.05
SDC2-203ENST00000519587 KCNJ12Q14500 433 aa15.34■□□□□ 0.05
SDC2-203ENST00000519587 NCAPHQ15003 741 aa15.34■□□□□ 0.05
SDC2-203ENST00000519587 CDKAL1Q5VV42 579 aa15.34■□□□□ 0.05
SDC2-203ENST00000519587 CRELD2Q6UXH1 353 aaPredicted RBP15.34■□□□□ 0.05
SDC2-203ENST00000519587 NT5DC4Q86YG4 428 aa15.34■□□□□ 0.05
SDC2-203ENST00000519587 RNF214Q8ND24 703 aa15.34■□□□□ 0.05
SDC2-203ENST00000519587 MFSD14AQ96MC6 490 aa15.34■□□□□ 0.05
SDC2-203ENST00000519587 SLC9A7Q96T83 725 aa15.34■□□□□ 0.05
SDC2-203ENST00000519587 MRPL9Q9BYD2 267 aaKnown RBP15.34■□□□□ 0.05
SDC2-203ENST00000519587 CNTN3Q9P232 1028 aa15.34■□□□□ 0.05
SDC2-203ENST00000519587 DERAQ9Y315 318 aa15.34■□□□□ 0.05
SDC2-203ENST00000519587 SLC4A7Q9Y6M7 1214 aa15.34■□□□□ 0.05
SDC2-203ENST00000519587 TTC26A0AVF1 554 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 MLH1P40692 756 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 VAMP7P51809 220 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 AP3M2P53677 418 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 EPHB4P54760 987 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 TMEM132DQ14C87 1099 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 TCP11X2Q5H9J9 407 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 DCAF17Q5H9S7 520 aaPredicted RBP15.33■□□□□ 0.04
SDC2-203ENST00000519587 TCERG1LQ5VWI1 586 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 C16orf59Q7L2K0 433 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 CREBRFQ8IUR6 639 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 WDR49Q8IV35 697 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 TMEM192Q8IY95 271 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 ZSWIM2Q8NEG5 633 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 LPPQ93052 612 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 CCDC127Q96BQ5 260 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 CGRRF1Q99675 332 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 UBE2OQ9C0C9 1292 aaKnown RBP15.33■□□□□ 0.04
SDC2-203ENST00000519587 SAMSN1Q9NSI8 373 aaKnown RBP15.33■□□□□ 0.04
SDC2-203ENST00000519587 SLC38A7Q9NVC3 462 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 C2CD2Q9Y426 696 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.33■□□□□ 0.04
SDC2-203ENST00000519587 FNDC1Q4ZHG4 1894 aaPredicted RBP15.33■□□□□ 0.04
SDC2-203ENST00000519587 PTPRSQ13332 1948 aa15.33■□□□□ 0.04
SDC2-203ENST00000519587 ARL5CA6NH57 179 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 INPPL1O15357 1258 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 N4BP1O75113 896 aaKnown RBP15.32■□□□□ 0.04
SDC2-203ENST00000519587 TNNC2P02585 160 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 DLATP10515 647 aaKnown RBP15.32■□□□□ 0.04
SDC2-203ENST00000519587 PRKCSHP14314 528 aaPredicted RBP15.32■□□□□ 0.04
SDC2-203ENST00000519587 ZNF18P17022 549 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 TNNI1P19237 187 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 GRIK3Q13003 919 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 SLC10A6Q3KNW5 377 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 HSP90AA4PQ58FG1 418 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 NOMO2Q5JPE7 1267 aa15.32■□□□□ 0.04
SDC2-203ENST00000519587 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.32■□□□□ 0.043e-6■■□□□ 13
SDC2-203ENST00000519587 AGMOQ6ZNB7 445 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms