RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 DTNBO60941 627 aa7.98□□□□□ -1.13
PTPN12-213ENST00000519553 ADAM17P78536 824 aa7.98□□□□□ -1.13
PTPN12-213ENST00000519553 BMT2Q1RMZ1 405 aa7.98□□□□□ -1.13
PTPN12-213ENST00000519553 DCAF17Q5H9S7 520 aaPredicted RBP7.98□□□□□ -1.13
PTPN12-213ENST00000519553 OTUD7BQ6GQQ9 843 aa7.98□□□□□ -1.13
PTPN12-213ENST00000519553 PPP4R3AQ6IN85 833 aa7.98□□□□□ -1.13
PTPN12-213ENST00000519553 CXorf57Q6NSI4 855 aaKnown RBP7.98□□□□□ -1.13
PTPN12-213ENST00000519553 Q6ZRM9 215 aa7.98□□□□□ -1.13
PTPN12-213ENST00000519553 DCBLD1Q8N8Z6 715 aa7.98□□□□□ -1.13
PTPN12-213ENST00000519553 TMX3Q96JJ7 454 aa7.98□□□□□ -1.13
PTPN12-213ENST00000519553 MOCS1Q9NZB8 636 aa7.98□□□□□ -1.13
PTPN12-213ENST00000519553 KLRG2A4D1S0 409 aaPredicted RBP7.97□□□□□ -1.13
PTPN12-213ENST00000519553 TBKBP1A7MCY6 615 aa7.97□□□□□ -1.13
PTPN12-213ENST00000519553 MFAP3LO75121 409 aa7.97□□□□□ -1.13
PTPN12-213ENST00000519553 RAP2AP10114 183 aa7.97□□□□□ -1.13
PTPN12-213ENST00000519553 ZNF20P17024 532 aa7.97□□□□□ -1.13
PTPN12-213ENST00000519553 METTL24Q5JXM2 366 aa7.97□□□□□ -1.13
PTPN12-213ENST00000519553 IFIT1BQ5T764 474 aaKnown RBP7.97□□□□□ -1.13
PTPN12-213ENST00000519553 MAGEB6Q8N7X4 407 aa7.97□□□□□ -1.13
PTPN12-213ENST00000519553 ATXN2LQ8WWM7 1075 aaKnown RBP7.97□□□□□ -1.13
PTPN12-213ENST00000519553 DVL3Q92997 716 aaPredicted RBP7.97□□□□□ -1.13
PTPN12-213ENST00000519553 MVB12AQ96EY5 273 aa7.97□□□□□ -1.13
PTPN12-213ENST00000519553 MYOCQ99972 504 aa7.97□□□□□ -1.13
PTPN12-213ENST00000519553 RUVBL1Q9Y265 456 aaKnown RBP7.97□□□□□ -1.13
PTPN12-213ENST00000519553 PNPLA7Q6ZV29 1317 aa7.97□□□□□ -1.13
PTPN12-213ENST00000519553 OFD1O75665 1012 aa7.96□□□□□ -1.14
PTPN12-213ENST00000519553 SNRPA1P09661 255 aaKnown RBP7.96□□□□□ -1.14
PTPN12-213ENST00000519553 HK1P19367 917 aa7.96□□□□□ -1.14
PTPN12-213ENST00000519553 HIBADHP31937 336 aaKnown RBP7.96□□□□□ -1.14
PTPN12-213ENST00000519553 CTXN1P60606 82 aa7.96□□□□□ -1.14
PTPN12-213ENST00000519553 PTH1RQ03431 593 aa7.96□□□□□ -1.14
PTPN12-213ENST00000519553 TLE1Q04724 770 aa7.96□□□□□ -1.14
PTPN12-213ENST00000519553 GTF2H3Q13889 308 aa7.96□□□□□ -1.14
PTPN12-213ENST00000519553 PGS1Q32NB8 556 aa7.96□□□□□ -1.14
PTPN12-213ENST00000519553 NAIF1Q69YI7 327 aaPredicted RBP7.96□□□□□ -1.14
PTPN12-213ENST00000519553 SEM1Q6ZVN7 128 aa7.96□□□□□ -1.14
PTPN12-213ENST00000519553 TTC7BQ86TV6 843 aa7.96□□□□□ -1.14
PTPN12-213ENST00000519553 PLXDC1Q8IUK5 500 aa7.96□□□□□ -1.14
PTPN12-213ENST00000519553 FMNL3Q8IVF7 1028 aa7.96□□□□□ -1.14
PTPN12-213ENST00000519553 DRC7Q8IY82 874 aa7.96□□□□□ -1.14
PTPN12-213ENST00000519553 CLPTM1LQ96KA5 538 aa7.96□□□□□ -1.14
PTPN12-213ENST00000519553 LRGUKQ96M69 825 aa7.96□□□□□ -1.14
PTPN12-213ENST00000519553 MRI1Q9BV20 369 aa7.96□□□□□ -1.14
PTPN12-213ENST00000519553 NMRK2Q9NPI5 230 aa7.96□□□□□ -1.14
PTPN12-213ENST00000519553 KRTAP23-1A1A580 65 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 LRRC14BA6NHZ5 514 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 MUSKO15146 869 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 CYP27B1O15528 508 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 TEX33O43247 280 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 AP1G1O43747 822 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 ATP5JP18859 108 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 SCNN1GP51170 649 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 CLRN1P58418 232 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 RAB39AQ14964 217 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 PRKD1Q15139 912 aaPredicted RBP7.95□□□□□ -1.14
PTPN12-213ENST00000519553 SPATS1Q496A3 300 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 RSPH3Q86UC2 560 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 PALM2Q8IXS6 379 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 RNF169Q8NCN4 708 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 DIS3LQ8TF46 1054 aaKnown RBP7.95□□□□□ -1.14
PTPN12-213ENST00000519553 TAAR9Q96RI9 348 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 MAP3K14Q99558 947 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 HDAC5Q9UQL6 1122 aa7.95□□□□□ -1.14
PTPN12-213ENST00000519553 PRR5-ARHGAP8B1AHC4 643 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 ACRV1P26436 265 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 ZNF280AP59817 542 aaPredicted RBP7.94□□□□□ -1.14
PTPN12-213ENST00000519553 MLC1Q15049 377 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 VPS72Q15906 364 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 DRICH1Q6PGQ1 229 aaPredicted RBP7.94□□□□□ -1.14
PTPN12-213ENST00000519553 SYT12Q8IV01 421 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 GRAMD1CQ8IYS0 662 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 MYO1HQ8N1T3 1032 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 SLC35G2Q8TBE7 412 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 TFAP2CQ92754 450 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 RGMAQ96B86 450 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 PGBD4Q96DM1 585 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 CLIP3Q96DZ5 547 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 MNTQ99583 582 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 GPR87Q9BY21 358 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 CALCOCO1Q9P1Z2 691 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 CHPF2Q9P2E5 772 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 TSC22D4Q9Y3Q8 395 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 TESMINQ9Y4I5 508 aa7.94□□□□□ -1.14
PTPN12-213ENST00000519553 RPLP2P05387 115 aaKnown RBP7.93□□□□□ -1.14
PTPN12-213ENST00000519553 HSPA6P17066 643 aa7.93□□□□□ -1.14
PTPN12-213ENST00000519553 MAN2A2P49641 1150 aa7.93□□□□□ -1.14
PTPN12-213ENST00000519553 RRP1BQ14684 758 aaKnown RBP7.93□□□□□ -1.14
PTPN12-213ENST00000519553 DACT2Q5SW24 774 aa7.93□□□□□ -1.14
PTPN12-213ENST00000519553 RUNDC1Q96C34 613 aa7.93□□□□□ -1.14
PTPN12-213ENST00000519553 VRK1Q99986 396 aaPredicted RBP7.93□□□□□ -1.14
PTPN12-213ENST00000519553 C11orf54Q9H0W9 315 aaPredicted RBP7.93□□□□□ -1.14
PTPN12-213ENST00000519553 GRXCR1A8MXD5 290 aa7.92□□□□□ -1.14
PTPN12-213ENST00000519553 MAP2K6P52564 334 aa7.92□□□□□ -1.14
PTPN12-213ENST00000519553 KRTAP10-2P60368 255 aa7.92□□□□□ -1.14
PTPN12-213ENST00000519553 RAP2BP61225 183 aa7.92□□□□□ -1.14
PTPN12-213ENST00000519553 NOGQ13253 232 aa7.92□□□□□ -1.14
PTPN12-213ENST00000519553 SPDYAQ5MJ70 313 aa7.92□□□□□ -1.14
PTPN12-213ENST00000519553 ATXN7L2Q5T6C5 722 aaPredicted RBP7.92□□□□□ -1.14
PTPN12-213ENST00000519553 ZNF529Q6P280 563 aa7.92□□□□□ -1.14
PTPN12-213ENST00000519553 PRRT2Q7Z6L0 340 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms