RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 DCLRE1AQ6PJP8 1040 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 HAUS6Q7Z4H7 955 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 PPFIBP1Q86W92 1011 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 GPBP1Q86WP2 473 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 TMEM87AQ8NBN3 555 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 RPGRIP1Q96KN7 1286 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 FBXL18Q96ME1 805 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 ZMAT2Q96NC0 199 aaKnown RBP10.25□□□□□ -0.77
HDAC3-215ENST00000519474 ACAP3Q96P50 834 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 FIZ1Q96SL8 496 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 POP1Q99575 1024 aaKnown RBP10.25□□□□□ -0.77
HDAC3-215ENST00000519474 REEP2Q9BRK0 252 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 TCHPQ9BT92 498 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 EMILIN2Q9BXX0 1053 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 PANK2Q9BZ23 570 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 LARSQ9P2J5 1176 aaKnown RBP10.25□□□□□ -0.77
HDAC3-215ENST00000519474 ODF2LQ9ULJ1 636 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 MORC2Q9Y6X9 1032 aaPredicted RBP10.25□□□□□ -0.77
HDAC3-215ENST00000519474 TTC28Q96AY4 2481 aa10.25□□□□□ -0.77
HDAC3-215ENST00000519474 DCXO43602 365 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 TOM1L1O75674 476 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 SPATA31D3P0C874 917 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 MCF2P10911 925 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 COL9A1P20849 921 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 GLUD2P49448 558 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 ZNF131P52739 623 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 NCKAP1LP55160 1127 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 SOX4Q06945 474 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-215ENST00000519474 HSP90AA2PQ14568 343 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-215ENST00000519474 SLC10A6Q3KNW5 377 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 SEZ6Q53EL9 994 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 HERC4Q5GLZ8 1057 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-215ENST00000519474 GLRA4Q5JXX5 417 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 TMEM31Q5JXX7 168 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 ATAT1Q5SQI0 421 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 KIAA1841Q6NSI8 718 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 CES5AQ6NT32 575 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 MPZL3Q6UWV2 235 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 ZPBP2Q6X784 338 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 SPATA31D4Q6ZUB0 917 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 MYCT1Q8N699 235 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 LNX1Q8TBB1 728 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-215ENST00000519474 LARP4BQ92615 738 aaKnown RBP10.24□□□□□ -0.77
HDAC3-215ENST00000519474 CLSTN3Q9BQT9 956 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 CCDC94Q9BW85 323 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-215ENST00000519474 POMKQ9H5K3 350 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 FNIP2Q9P278 1114 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 RAPGEFL1Q9UHV5 662 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 MUTYHQ9UIF7 546 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 TDRD15B5MCY1 1934 aaKnown RBP10.24□□□□□ -0.77
HDAC3-215ENST00000519474 PHLPP2Q6ZVD8 1323 aa10.24□□□□□ -0.77
HDAC3-215ENST00000519474 FAM86C2PA6NEL3 165 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 TRAK2O60296 914 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 FAM13AO94988 1023 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 KIF4AO95239 1232 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 C1RP00736 705 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 URODP06132 367 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 MYBP10242 640 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 KCNE1P15382 129 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 RPL17P18621 184 aaKnown RBP10.23□□□□□ -0.77
HDAC3-215ENST00000519474 PTMSP20962 102 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 MTHFRP42898 656 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 NASPP49321 788 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-215ENST00000519474 CLCNKBP51801 687 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 GTF2BQ00403 316 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 MCL1Q07820 350 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 STRN3Q13033 797 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 UPP1Q16831 310 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 ZNF568Q3ZCX4 644 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 RTP2Q5QGT7 225 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 FAM171A1Q5VUB5 890 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 RRAGBQ5VZM2 374 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 PRSS55Q6UWB4 352 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-215ENST00000519474 TMC5Q6UXY8 1006 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 APBB1IPQ7Z5R6 666 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-215ENST00000519474 GPR149Q86SP6 731 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 CEP57Q86XR8 500 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 PALB2Q86YC2 1186 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 LINC00301Q8NCQ3 95 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 HASPINQ8TF76 798 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 RIN2Q8WYP3 895 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-215ENST00000519474 GOLGA2P5Q9HBQ8 144 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 DZANK1Q9NVP4 752 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 CCDC39Q9UFE4 941 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 TBX20Q9UMR3 447 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 NCOR1O75376 2440 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 TRIP11Q15643 1979 aa10.23□□□□□ -0.77
HDAC3-215ENST00000519474 A0A087X0B3 334 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 CCDC195A0A1B0GUA6 201 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 MYMKA6NI61 221 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 ANKRD63C9JTQ0 380 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 H0YCG3 227 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 TMEM189-UBE2V1I3L0A0 370 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 CLDN3O15551 220 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 ADAM12O43184 909 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 TGM5O43548 720 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 B3GAT3O94766 335 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 PAPLNO95428 1278 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 ADH1AP07327 375 aa10.22□□□□□ -0.77
HDAC3-215ENST00000519474 ADRB2P07550 413 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms