RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 RNF135Q8IUD6 432 aa13.95□□□□□ -0.18
MCPH1-202ENST00000519221 HSCBQ8IWL3 235 aa13.95□□□□□ -0.18
MCPH1-202ENST00000519221 HDAC7Q8WUI4 952 aa13.95□□□□□ -0.18
MCPH1-202ENST00000519221 LARP4BQ92615 738 aaKnown RBP13.95□□□□□ -0.18
MCPH1-202ENST00000519221 PPP1R10Q96QC0 940 aaKnown RBP13.95□□□□□ -0.18
MCPH1-202ENST00000519221 REEP2Q9BRK0 252 aa13.95□□□□□ -0.18
MCPH1-202ENST00000519221 TCHPQ9BT92 498 aa13.95□□□□□ -0.18
MCPH1-202ENST00000519221 GPR62Q9BZJ7 368 aa13.95□□□□□ -0.18
MCPH1-202ENST00000519221 SFXN1Q9H9B4 322 aa13.95□□□□□ -0.18
MCPH1-202ENST00000519221 SLC38A7Q9NVC3 462 aa13.95□□□□□ -0.18
MCPH1-202ENST00000519221 CCDC39Q9UFE4 941 aa13.95□□□□□ -0.18
MCPH1-202ENST00000519221 FBXO2Q9UK22 296 aaPredicted RBP13.95□□□□□ -0.18
MCPH1-202ENST00000519221 ZDBF2Q9HCK1 2354 aa13.95□□□□□ -0.18
MCPH1-202ENST00000519221 F8W810 466 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 TEX28O15482 410 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 TRIOO75962 3097 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 FAM13AO94988 1023 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 MARCKSP29966 332 aaPredicted RBP13.94□□□□□ -0.18
MCPH1-202ENST00000519221 MCM6Q14566 821 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 ATAT1Q5SQI0 421 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 ALKAL1Q6UXT8 129 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 CYP26C1Q6V0L0 522 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 C15orf39Q6ZRI6 1047 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 HAUS6Q7Z4H7 955 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 CMASQ8NFW8 434 aaPredicted RBP13.94□□□□□ -0.18
MCPH1-202ENST00000519221 LRRC15Q8TF66 581 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 DDX27Q96GQ7 796 aaKnown RBP13.94□□□□□ -0.18
MCPH1-202ENST00000519221 RPGRIP1Q96KN7 1286 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 ACAP3Q96P50 834 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 RHOBTB2Q9BYZ6 727 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 PARVGQ9HBI0 331 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 NR2E1Q9Y466 385 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.94□□□□□ -0.18
MCPH1-202ENST00000519221 GTF3C3Q9Y5Q9 886 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 ZNF318Q5VUA4 2279 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 DOCK8Q8NF50 2099 aa13.94□□□□□ -0.18
MCPH1-202ENST00000519221 NPHP3-ACAD11A0A0J9YXS1 232 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 SMIM28A0A1B0GU29 152 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 CASTOR2A6NHX0 329 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 TBCAO75347 108 aaKnown RBP13.93□□□□□ -0.18
MCPH1-202ENST00000519221 KIF4AO95239 1232 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 GLUD1P00367 558 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 KRT18P05783 430 aaKnown RBP13.93□□□□□ -0.18
MCPH1-202ENST00000519221 KCNE1P15382 129 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 NASPP49321 788 aaPredicted RBP13.93□□□□□ -0.18
MCPH1-202ENST00000519221 CACNB1Q02641 598 aaPredicted RBP13.93□□□□□ -0.18
MCPH1-202ENST00000519221 MCL1Q07820 350 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 DHX8Q14562 1220 aaKnown RBP13.93□□□□□ -0.18
MCPH1-202ENST00000519221 NOLC1Q14978 699 aaKnown RBP eCLIP13.93□□□□□ -0.18
MCPH1-202ENST00000519221 KYAT1Q16773 422 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 RARS2Q5T160 578 aaKnown RBP13.93□□□□□ -0.18
MCPH1-202ENST00000519221 FAM173BQ6P4H8 233 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 DCLRE1AQ6PJP8 1040 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 GPR149Q86SP6 731 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 MYCT1Q8N699 235 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 CEP120Q8N960 986 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 KRI1Q8N9T8 703 aaKnown RBP13.93□□□□□ -0.18
MCPH1-202ENST00000519221 PIK3R5Q8WYR1 880 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 EPSTI1Q96J88 318 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 SNX27Q96L92 541 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 USP28Q96RU2 1077 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 PAAF1Q9BRP4 392 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 LRFN3Q9BTN0 628 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 TTPALQ9BTX7 342 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 APOL5Q9BWW9 433 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 CXCL16Q9H2A7 254 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 PLEKHA4Q9H4M7 779 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 C11orf16Q9NQ32 467 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 FOXD4L1Q9NU39 408 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 DOCK6Q96HP0 2047 aa13.93□□□□□ -0.18
MCPH1-202ENST00000519221 SPDYE4A6NLX3 237 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 PRR33A8MZF0 331 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 CLDN3O15551 220 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 TRAPPC3O43617 180 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 TRAK2O60296 914 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 PAPLNO95428 1278 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 PIGRP01833 764 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 HSP90AA1P07900 732 aaKnown RBP13.92□□□□□ -0.18
MCPH1-202ENST00000519221 GLRA4Q5JXX5 417 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 RRAGBQ5VZM2 374 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.92□□□□□ -0.18
MCPH1-202ENST00000519221 USP49Q70CQ1 688 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 ZBTB33Q86T24 672 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 RIN2Q8WYP3 895 aaPredicted RBP13.92□□□□□ -0.18
MCPH1-202ENST00000519221 RABGGTAQ92696 567 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 ZNF396Q96N95 335 aaPredicted RBP13.92□□□□□ -0.18
MCPH1-202ENST00000519221 ST6GALNAC4Q9H4F1 302 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 POMKQ9H5K3 350 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 CNTN3Q9P232 1028 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 ANKFY1Q9P2R3 1169 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 MUTYHQ9UIF7 546 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 USTQ9Y2C2 406 aa13.92□□□□□ -0.18
MCPH1-202ENST00000519221 ANK1P16157 1881 aa13.91□□□□□ -0.18
MCPH1-202ENST00000519221 MUC6Q6W4X9 2439 aa13.91□□□□□ -0.18
MCPH1-202ENST00000519221 K7ENM7 598 aa13.91□□□□□ -0.18
MCPH1-202ENST00000519221 B3GAT3O94766 335 aa13.91□□□□□ -0.18
MCPH1-202ENST00000519221 CLTAP09496 248 aa13.91□□□□□ -0.18
MCPH1-202ENST00000519221 COL9A1P20849 921 aa13.91□□□□□ -0.18
MCPH1-202ENST00000519221 OSTNP61366 133 aa13.91□□□□□ -0.18
MCPH1-202ENST00000519221 CEBPZQ03701 1054 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms