RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 TEKT5Q96M29 485 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 C7orf25Q9BPX7 421 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 MRI1Q9BV20 369 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 ZNF768Q9H5H4 540 aaKnown RBP4.99□□□□□ -1.61
SKP1-205ENST00000519054 NRDE2Q9H7Z3 1164 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 TMEM140Q9NV12 185 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 MOCS1Q9NZB8 636 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 TRPM5Q9NZQ8 1165 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 SRRDQ9UH36 339 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 SAP30BPQ9UHR5 308 aaKnown RBP4.99□□□□□ -1.61
SKP1-205ENST00000519054 RUVBL1Q9Y265 456 aaKnown RBP4.99□□□□□ -1.61
SKP1-205ENST00000519054 NOP58Q9Y2X3 529 aaKnown RBP4.99□□□□□ -1.61
SKP1-205ENST00000519054 ACTL7AQ9Y615 435 aa4.99□□□□□ -1.61
SKP1-205ENST00000519054 PNPLA7Q6ZV29 1317 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 AHRRA9YTQ3 701 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 GPR32O75388 356 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 PEX11BO96011 259 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 SNRPA1P09661 255 aaKnown RBP4.98□□□□□ -1.61
SKP1-205ENST00000519054 ATP5JP18859 108 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 NR4A1P22736 598 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 CCND1P24385 295 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 SLC16A1P53985 500 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 FAM189BP81408 668 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 KIF23Q02241 960 aaPredicted RBP4.98□□□□□ -1.61
SKP1-205ENST00000519054 ABHD18Q0P651 414 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 KLF10Q13118 480 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 ODF1Q14990 250 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 EFCAB2Q5VUJ9 269 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 RPUSD2Q8IZ73 545 aaKnown RBP4.98□□□□□ -1.61
SKP1-205ENST00000519054 ZGPATQ8N5A5 531 aaKnown RBP4.98□□□□□ -1.61
SKP1-205ENST00000519054 MYOCQ99972 504 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 BRINP2Q9C0B6 783 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 MANSC1Q9H8J5 431 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 GPRC5BQ9NZH0 403 aa4.98□□□□□ -1.61
SKP1-205ENST00000519054 hCG_2014768A0A024R1R8 64 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 DRGXA6NNA5 263 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 AMY1AP04745 511 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 MAKP20794 623 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 MCM7P33993 719 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 CHN2P52757 468 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 MTM1Q13496 603 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 ZNF529Q6P280 563 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 MIGA2Q7L4E1 593 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 GDF7Q7Z4P5 450 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 CASKIN2Q8WXE0 1202 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 CYFIP2Q96F07 1278 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 DCLRE1CQ96SD1 692 aaKnown RBP4.97□□□□□ -1.61
SKP1-205ENST00000519054 TEX101Q9BY14 249 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 SLC23A1Q9UHI7 598 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 ING1Q9UK53 422 aaPredicted RBP4.97□□□□□ -1.61
SKP1-205ENST00000519054 LIMCH1Q9UPQ0 1083 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 CHST2Q9Y4C5 530 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 PCDHA13Q9Y5I0 950 aa4.97□□□□□ -1.61
SKP1-205ENST00000519054 MYBBP1AQ9BQG0 1328 aaKnown RBP4.97□□□□□ -1.61
SKP1-205ENST00000519054 CYR61O00622 381 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 ZNF185O15231 689 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 TEX33O43247 280 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 NCR1O76036 304 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 ADH4P08319 380 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 ZSCAN20P17040 1043 aaPredicted RBP4.96□□□□□ -1.62
SKP1-205ENST00000519054 DDCP20711 480 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 PTGS2P35354 604 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 WASP42768 502 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 ANAPC15P60006 121 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 KRT85P78386 507 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 UAP1L1Q3KQV9 507 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 C3orf36Q3SXR2 165 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 PDCD4Q53EL6 469 aaKnown RBP4.96□□□□□ -1.62
SKP1-205ENST00000519054 MED25Q71SY5 747 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 UBE3BQ7Z3V4 1068 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 SYNE4Q8N205 404 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 NEU4Q8WWR8 484 aaPredicted RBP4.96□□□□□ -1.62
SKP1-205ENST00000519054 HAS1Q92839 578 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 HDAC10Q969S8 669 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 NEU1Q99519 415 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 SLC46A2Q9BY10 475 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 TDP1Q9NUW8 608 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 SERPINB13Q9UIV8 391 aa4.96□□□□□ -1.62
SKP1-205ENST00000519054 USP15Q9Y4E8 981 aaPredicted RBP4.96□□□□□ -1.62
SKP1-205ENST00000519054 SHROOM4Q9ULL8 1493 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 CCDC154A6NI56 674 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 HTRA2O43464 458 aaPredicted RBP4.95□□□□□ -1.62
SKP1-205ENST00000519054 POMCP01189 267 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 SLPIP03973 132 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 EDNRBP24530 442 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 ZFP36P26651 326 aaKnown RBP4.95□□□□□ -1.62
SKP1-205ENST00000519054 ATP8B2P98198 1209 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 IL10RAQ13651 578 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 FHL2Q14192 279 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 FAM102AQ5T9C2 384 aaPredicted RBP4.95□□□□□ -1.62
SKP1-205ENST00000519054 METRNLQ641Q3 311 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 OTUD7BQ6GQQ9 843 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 RSPH3Q86UC2 560 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 DRC7Q8IY82 874 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 LARP4BQ92615 738 aaKnown RBP4.95□□□□□ -1.62
SKP1-205ENST00000519054 KAT5Q92993 513 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 COA7Q96BR5 231 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 TMX3Q96JJ7 454 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 SLC13A1Q9BZW2 595 aa4.95□□□□□ -1.62
SKP1-205ENST00000519054 PCED1AQ9H1Q7 454 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms