RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 THSD7BQ9C0I4 1608 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 CCDC196A0A1B0GTZ2 297 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 BICDL2A1A5D9 508 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 CPLX1O14810 134 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 ATP2A1O14983 1001 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 ZBTB5O15062 677 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 CFBP00751 764 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 PDIA3P30101 505 aaKnown RBP3.11□□□□□ -1.91
SKP1-204ENST00000517691 CDC25BP30305 580 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 L1CAMP32004 1257 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 AK2P54819 239 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 UBXN2AP68543 259 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 CNTN2Q02246 1040 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 NRG1Q02297 640 aaPredicted RBP3.11□□□□□ -1.91
SKP1-204ENST00000517691 TRAF1Q13077 416 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 BAATQ14032 418 aaPredicted RBP3.11□□□□□ -1.91
SKP1-204ENST00000517691 TOB2Q14106 344 aaPredicted RBP3.11□□□□□ -1.91
SKP1-204ENST00000517691 GRB14Q14449 540 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 INPP5AQ14642 412 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 GRM3Q14832 879 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 FXNQ16595 210 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 CCL14Q16627 93 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 FOXB2Q5VYV0 432 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 MFSD14CQ5VZR4 134 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 RNF207Q6ZRF8 634 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 TOGARAM2Q6ZUX3 1019 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 TMTC3Q6ZXV5 915 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 HEATR3Q7Z4Q2 680 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 MAATS1Q7Z4T9 603 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 OR6P1Q8NGX9 317 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 GPBAR1Q8TDU6 330 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 LEO1Q8WVC0 666 aaPredicted RBP3.11□□□□□ -1.91
SKP1-204ENST00000517691 NELL1Q92832 810 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 SERINC2Q96SA4 455 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 NELL2Q99435 816 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 MAP3K14Q99558 947 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 AMNQ9BXJ7 453 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 RNF208Q9H0X6 261 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 CCDC86Q9H6F5 360 aaKnown RBP3.11□□□□□ -1.91
SKP1-204ENST00000517691 SOX17Q9H6I2 414 aaPredicted RBP3.11□□□□□ -1.91
SKP1-204ENST00000517691 NCOA5Q9HCD5 579 aaKnown RBP3.11□□□□□ -1.91
SKP1-204ENST00000517691 FNIP2Q9P278 1114 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 FBXO2Q9UK22 296 aaPredicted RBP3.11□□□□□ -1.91
SKP1-204ENST00000517691 TRHDEQ9UKU6 1024 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 MRPL11Q9Y3B7 192 aaKnown RBP3.11□□□□□ -1.91
SKP1-204ENST00000517691 NUB1Q9Y5A7 615 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 PCDHA1Q9Y5I3 950 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 ZNF536O15090 1300 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 ABCB11O95342 1321 aa3.11□□□□□ -1.91
SKP1-204ENST00000517691 ELOA3CA0A087WX78 387 aaPredicted RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 A0A1W2PQH9 124 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 ELOA3DA6NLF2 546 aaPredicted RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 H3BRJ5 948 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 NFIBO00712 420 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 CYTH3O43739 400 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 PPP1R11O60927 126 aaPredicted RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 RFPL1O75677 317 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 RGS9O75916 674 aaPredicted RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 ALBP02768 609 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 TFRCP02786 760 aaKnown RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 HMGCRP04035 888 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 CTSBP07858 339 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 IMPDH2P12268 514 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 CCL5P13501 91 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 SMARCA1P28370 1054 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 CYP2C19P33261 490 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 GSTM4Q03013 218 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 CACNB2Q08289 660 aaPredicted RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 AP3B2Q13367 1082 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 PPP2R5BQ15173 497 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 SLC35G1Q2M3R5 365 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 ELOA3BQ3SY89 546 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 TUBB8Q3ZCM7 444 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 PRAMEF19Q5SWL8 479 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 JAKMIP3Q5VZ66 844 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 XRRA1Q6P2D8 792 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 TXNDC11Q6PKC3 985 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 CPLX2Q6PUV4 134 aaKnown RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 C6orf15Q6UXA7 325 aaPredicted RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 KRT77Q7Z794 578 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 ABRAQ8N0Z2 381 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 IL22RA1Q8N6P7 574 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 NECAB1Q8N987 351 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 ZSWIM2Q8NEG5 633 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 ELOA3Q8NG57 546 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 NPLOC4Q8TAT6 608 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 NUDT8Q8WV74 236 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 TRIB2Q92519 343 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 TBC1D5Q92609 795 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 USP6NLQ92738 828 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 CUL5Q93034 780 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 PHKBQ93100 1093 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 WDR89Q96FK6 387 aaPredicted RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 ZNF274Q96GC6 653 aaPredicted RBP3.1□□□□□ -1.91
SKP1-204ENST00000517691 MAML3Q96JK9 1138 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 SPZ1Q9BXG8 430 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 SLC26A6Q9BXS9 759 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 RIOX1Q9H6W3 641 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 FBRSQ9HAH7 460 aa3.1□□□□□ -1.91
SKP1-204ENST00000517691 A1CFQ9NQ94 594 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms