RNA–Protein interactions for RNA: ENST00000517323.2

TRPS1-206, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 5

Gene TRPS1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-206ENST00000517323 TDRD10Q5VZ19 366 aaKnown RBP16.82■□□□□ 0.28
TRPS1-206ENST00000517323 SV2AQ7L0J3 742 aa16.82■□□□□ 0.28
TRPS1-206ENST00000517323 BRSK2Q8IWQ3 736 aa16.82■□□□□ 0.28
TRPS1-206ENST00000517323 ERGIC2Q96RQ1 377 aa16.82■□□□□ 0.28
TRPS1-206ENST00000517323 FNBP1Q96RU3 617 aa16.82■□□□□ 0.28
TRPS1-206ENST00000517323 TRIM6Q9C030 488 aaPredicted RBP16.82■□□□□ 0.28
TRPS1-206ENST00000517323 CACNG4Q9UBN1 327 aa16.82■□□□□ 0.28
TRPS1-206ENST00000517323 NBNO60934 754 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 MCF2P10911 925 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 SCP2P22307 547 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 CDC42EP1Q00587 391 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 PAK2Q13177 524 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 PSMD6Q15008 389 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 E4F1Q66K89 784 aaPredicted RBP16.81■□□□□ 0.28
TRPS1-206ENST00000517323 RPAINQ86UA6 219 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 TC2NQ8N9U0 490 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 RNF169Q8NCN4 708 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 SMG8Q8ND04 991 aaKnown RBP16.81■□□□□ 0.28
TRPS1-206ENST00000517323 ADPGKQ9BRR6 497 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 SIX2Q9NPC8 291 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 MXI1P50539 228 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 TFAMQ00059 246 aaKnown RBP16.81■□□□□ 0.28
TRPS1-206ENST00000517323 EXOC3L4Q17RC7 722 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 JADE1Q6IE81 842 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 SPOPLQ6IQ16 392 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 KAT5Q92993 513 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 ZFP42Q96MM3 310 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 ZMAT2Q96NC0 199 aaKnown RBP16.81■□□□□ 0.28
TRPS1-206ENST00000517323 TTYH3Q9C0H2 523 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 ERVK-5Q9HDB9 667 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 IPPQ9Y573 584 aa16.81■□□□□ 0.28
TRPS1-206ENST00000517323 LDHAP00338 332 aaKnown RBP16.8■□□□□ 0.28
TRPS1-206ENST00000517323 ITGB8P26012 769 aa16.8■□□□□ 0.28
TRPS1-206ENST00000517323 POLR2FP61218 127 aaKnown RBP16.8■□□□□ 0.28
TRPS1-206ENST00000517323 TRIM65Q6PJ69 517 aa16.8■□□□□ 0.28
TRPS1-206ENST00000517323 LRRC8DQ7L1W4 858 aa16.8■□□□□ 0.28
TRPS1-206ENST00000517323 RRAGAQ7L523 313 aa16.8■□□□□ 0.28
TRPS1-206ENST00000517323 LMO3Q8TAP4 145 aa16.8■□□□□ 0.28
TRPS1-206ENST00000517323 TMEM106CQ9BVX2 250 aa16.8■□□□□ 0.28
TRPS1-206ENST00000517323 WNT8AQ9H1J5 351 aa16.8■□□□□ 0.28
TRPS1-206ENST00000517323 RPF1Q9H9Y2 349 aaKnown RBP16.8■□□□□ 0.28
TRPS1-206ENST00000517323 FHOD1Q9Y613 1164 aa16.8■□□□□ 0.28
TRPS1-206ENST00000517323 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.8■□□□□ 0.28
TRPS1-206ENST00000517323 A0A1W2PQC6 194 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 RECQL4O94761 1208 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 VNN1O95497 513 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 NCBP1Q09161 790 aaKnown RBP16.79■□□□□ 0.28
TRPS1-206ENST00000517323 BIRC3Q13489 604 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 ARHGEF19Q8IW93 802 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 C17orf53Q8N3J3 647 aaPredicted RBP16.79■□□□□ 0.28
TRPS1-206ENST00000517323 INTS2Q9H0H0 1204 aaKnown RBP16.79■□□□□ 0.28
TRPS1-206ENST00000517323 C11orf49Q9H6J7 331 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 MAPK13O15264 365 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 CLSTN1O94985 981 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 CST3P01034 146 aaPredicted RBP16.79■□□□□ 0.28
TRPS1-206ENST00000517323 PHLDB3Q6NSJ2 640 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 GBP6Q6ZN66 633 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 DEFB128Q7Z7B8 93 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 RTN4RL1Q86UN2 441 aaPredicted RBP16.79■□□□□ 0.28
TRPS1-206ENST00000517323 PPFIBP1Q86W92 1011 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 TMC2Q8TDI7 906 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 C18orf25Q96B23 403 aaPredicted RBP16.79■□□□□ 0.28
TRPS1-206ENST00000517323 ACAP3Q96P50 834 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 ADAM2Q99965 735 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 IFIH1Q9BYX4 1025 aaKnown RBP16.79■□□□□ 0.28
TRPS1-206ENST00000517323 HIPK3Q9H422 1215 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 KIAA1586Q9HCI6 787 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 PARP2Q9UGN5 583 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 PLAGL2Q9UPG8 496 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 PCDHB2Q9Y5E7 798 aa16.79■□□□□ 0.28
TRPS1-206ENST00000517323 EPC2Q52LR7 807 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 FAM26DQ5JW98 314 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 LRRC8AQ8IWT6 810 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 LINC01599Q8WXQ3 324 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 RABGGTAQ92696 567 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 ARID3AQ99856 593 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 GANQ9H2C0 597 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 GOLGA2P5Q9HBQ8 144 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 PRDM5Q9NQX1 630 aaPredicted RBP16.78■□□□□ 0.28
TRPS1-206ENST00000517323 MROH7Q68CQ1 1323 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 ITIH6Q6UXX5 1313 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 SCN1AP35498 2009 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 MFAP3LO75121 409 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 C4BPAP04003 597 aaKnown RBP16.78■□□□□ 0.28
TRPS1-206ENST00000517323 CLTAP09496 248 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 SELPP16109 830 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 IGFBP6P24592 240 aaPredicted RBP16.78■□□□□ 0.28
TRPS1-206ENST00000517323 KRT9P35527 623 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 ARID5AQ03989 594 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 KRT39Q6A163 491 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 ANKRD33Q7Z3H0 272 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 NEK11Q8NG66 645 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 TATDN2Q93075 761 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 CGRRF1Q99675 332 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 ALPK3Q96L96 1907 aa16.78■□□□□ 0.28
TRPS1-206ENST00000517323 CEP290O15078 2479 aa16.77■□□□□ 0.28
TRPS1-206ENST00000517323 CALCAP01258 141 aa16.77■□□□□ 0.28
TRPS1-206ENST00000517323 GRM5P41594 1212 aa16.77■□□□□ 0.28
TRPS1-206ENST00000517323 CLDN10P78369 228 aa16.77■□□□□ 0.28
TRPS1-206ENST00000517323 RAPGEF1Q13905 1077 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms