RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 DRICH1Q6PGQ1 229 aaPredicted RBP7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 RHOUQ7L0Q8 258 aa7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 FUBP3Q96I24 572 aaKnown RBP eCLIP7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 MRI1Q9BV20 369 aa7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 MRIQ9BWK5 157 aa7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 SENP6Q9GZR1 1112 aaPredicted RBP7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 INTUQ9ULD6 942 aa7.05□□□□□ -1.28
SCARNA1-201ENST00000517138 DRGXA6NNA5 263 aa7.04□□□□□ -1.28
SCARNA1-201ENST00000517138 NCR1O76036 304 aa7.04□□□□□ -1.28
SCARNA1-201ENST00000517138 PEX11BO96011 259 aa7.04□□□□□ -1.28
SCARNA1-201ENST00000517138 RBP3P10745 1247 aa7.04□□□□□ -1.28
SCARNA1-201ENST00000517138 SP140Q13342 867 aa7.04□□□□□ -1.28
SCARNA1-201ENST00000517138 ODF1Q14990 250 aa7.04□□□□□ -1.28
SCARNA1-201ENST00000517138 ATXN7L2Q5T6C5 722 aaPredicted RBP7.04□□□□□ -1.28
SCARNA1-201ENST00000517138 FAM102AQ5T9C2 384 aaPredicted RBP7.04□□□□□ -1.28
SCARNA1-201ENST00000517138 GDF7Q7Z4P5 450 aa7.04□□□□□ -1.28
SCARNA1-201ENST00000517138 LANCL2Q9NS86 450 aa7.04□□□□□ -1.28
SCARNA1-201ENST00000517138 RUVBL1Q9Y265 456 aaKnown RBP7.04□□□□□ -1.28
SCARNA1-201ENST00000517138 POLR2AP24928 1970 aaKnown RBP7.04□□□□□ -1.28
SCARNA1-201ENST00000517138 CCDC78A2IDD5 438 aa7.03□□□□□ -1.28
SCARNA1-201ENST00000517138 XPOTO43592 962 aaKnown RBP7.03□□□□□ -1.28
SCARNA1-201ENST00000517138 PRSS23O95084 383 aa7.03□□□□□ -1.28
SCARNA1-201ENST00000517138 MAKP20794 623 aa7.03□□□□□ -1.28
SCARNA1-201ENST00000517138 SLC6A2P23975 617 aa7.03□□□□□ -1.28
SCARNA1-201ENST00000517138 HAS1Q92839 578 aa7.03□□□□□ -1.28
SCARNA1-201ENST00000517138 SMAD5Q99717 465 aaKnown RBP7.03□□□□□ -1.28
SCARNA1-201ENST00000517138 MAP3K2Q9Y2U5 619 aa7.03□□□□□ -1.28
SCARNA1-201ENST00000517138 PJA2O43164 708 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 RECQL4O94761 1208 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 ENDOD1O94919 500 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 ADH4P08319 380 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 EDNRBP24530 442 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 HMGA2P52926 109 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 MTM1Q13496 603 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 FAM180AQ6UWF9 173 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 LDLRAD3Q86YD5 345 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 VRK3Q8IV63 474 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 RPUSD2Q8IZ73 545 aaKnown RBP7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 ZFP28Q8NHY6 868 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 TEKT5Q96M29 485 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 FAM193BQ96PV7 902 aaPredicted RBP7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 ASPSCR1Q9BZE9 553 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 FBXO34Q9NWN3 711 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 SERPINB13Q9UIV8 391 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 FZD1Q9UP38 647 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 LIMCH1Q9UPQ0 1083 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 USP15Q9Y4E8 981 aaPredicted RBP7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 PCDHA13Q9Y5I0 950 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 HS3ST4Q9Y661 456 aa7.02□□□□□ -1.29
SCARNA1-201ENST00000517138 CENPVL1A0A0U1RR11 272 aa7.01□□□□□ -1.29
SCARNA1-201ENST00000517138 KLHL33A6NCF5 533 aa7.01□□□□□ -1.29
SCARNA1-201ENST00000517138 GPR32O75388 356 aa7.01□□□□□ -1.29
SCARNA1-201ENST00000517138 SNRPA1P09661 255 aaKnown RBP7.01□□□□□ -1.29
SCARNA1-201ENST00000517138 ATP8B2P98198 1209 aa7.01□□□□□ -1.29
SCARNA1-201ENST00000517138 C3orf36Q3SXR2 165 aa7.01□□□□□ -1.29
SCARNA1-201ENST00000517138 MED25Q71SY5 747 aa7.01□□□□□ -1.29
SCARNA1-201ENST00000517138 UBE3BQ7Z3V4 1068 aa7.01□□□□□ -1.29
SCARNA1-201ENST00000517138 RHOT1Q8IXI2 618 aa7.01□□□□□ -1.29
SCARNA1-201ENST00000517138 DCBLD1Q8N8Z6 715 aa7.01□□□□□ -1.29
SCARNA1-201ENST00000517138 LENG9Q96B70 501 aa7.01□□□□□ -1.29
SCARNA1-201ENST00000517138 SLC46A2Q9BY10 475 aa7.01□□□□□ -1.29
SCARNA1-201ENST00000517138 AKIP1Q9NQ31 210 aa7.01□□□□□ -1.29
SCARNA1-201ENST00000517138 CLCA2Q9UQC9 943 aa7.01□□□□□ -1.29
SCARNA1-201ENST00000517138 SHTN1A0MZ66 631 aa7□□□□□ -1.29
SCARNA1-201ENST00000517138 NDUFA10O95299 355 aa7□□□□□ -1.29
SCARNA1-201ENST00000517138 ITGB1P05556 798 aa7□□□□□ -1.29
SCARNA1-201ENST00000517138 IL2RBP14784 551 aa7□□□□□ -1.29
SCARNA1-201ENST00000517138 ATP5JP18859 108 aa7□□□□□ -1.29
SCARNA1-201ENST00000517138 PTGS2P35354 604 aa7□□□□□ -1.29
SCARNA1-201ENST00000517138 TARDBPQ13148 414 aaKnown RBP eCLIP7□□□□□ -1.29
SCARNA1-201ENST00000517138 IL10RAQ13651 578 aa7□□□□□ -1.29
SCARNA1-201ENST00000517138 PTPN21Q16825 1174 aa7□□□□□ -1.29
SCARNA1-201ENST00000517138 PTPROQ16827 1216 aa7□□□□□ -1.29
SCARNA1-201ENST00000517138 RRP12Q5JTH9 1297 aaKnown RBP7□□□□□ -1.29
SCARNA1-201ENST00000517138 ZNF529Q6P280 563 aa7□□□□□ -1.29
SCARNA1-201ENST00000517138 LRRC55Q6ZSA7 311 aa7□□□□□ -1.29
SCARNA1-201ENST00000517138 PROKR1Q8TCW9 393 aa7□□□□□ -1.29
SCARNA1-201ENST00000517138 DCLRE1CQ96SD1 692 aaKnown RBP7□□□□□ -1.29
SCARNA1-201ENST00000517138 IKZF4Q9H2S9 585 aa7□□□□□ -1.29
SCARNA1-201ENST00000517138 TMEM140Q9NV12 185 aa7□□□□□ -1.29
SCARNA1-201ENST00000517138 ANKFY1Q9P2R3 1169 aa7□□□□□ -1.29
SCARNA1-201ENST00000517138 IPPQ9Y573 584 aa7□□□□□ -1.29
SCARNA1-201ENST00000517138 MYBBP1AQ9BQG0 1328 aaKnown RBP7□□□□□ -1.29
SCARNA1-201ENST00000517138 FAM171A2A8MVW0 826 aa6.99□□□□□ -1.29
SCARNA1-201ENST00000517138 HTRA2O43464 458 aaPredicted RBP6.99□□□□□ -1.29
SCARNA1-201ENST00000517138 ELANEP08246 267 aa6.99□□□□□ -1.29
SCARNA1-201ENST00000517138 DDCP20711 480 aa6.99□□□□□ -1.29
SCARNA1-201ENST00000517138 MGAT1P26572 445 aa6.99□□□□□ -1.29
SCARNA1-201ENST00000517138 WASP42768 502 aa6.99□□□□□ -1.29
SCARNA1-201ENST00000517138 BEAN1Q3B7T3 259 aa6.99□□□□□ -1.29
SCARNA1-201ENST00000517138 AGAP9Q5VTM2 703 aa6.99□□□□□ -1.29
SCARNA1-201ENST00000517138 OTUD7BQ6GQQ9 843 aa6.99□□□□□ -1.29
SCARNA1-201ENST00000517138 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.99□□□□□ -1.29
SCARNA1-201ENST00000517138 CASKIN2Q8WXE0 1202 aa6.99□□□□□ -1.29
SCARNA1-201ENST00000517138 ADAM2Q99965 735 aa6.99□□□□□ -1.29
SCARNA1-201ENST00000517138 C7orf25Q9BPX7 421 aa6.99□□□□□ -1.29
SCARNA1-201ENST00000517138 ZSWIM1Q9BR11 485 aa6.99□□□□□ -1.29
SCARNA1-201ENST00000517138 MOCS1Q9NZB8 636 aa6.99□□□□□ -1.29
SCARNA1-201ENST00000517138 DKK2Q9UBU2 259 aa6.99□□□□□ -1.29
SCARNA1-201ENST00000517138 TCRBV7S2A1N4TA0A589 114 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms