RNA–Protein interactions for RNA: ENST00000517041.1

RNU1-117P-201, Transcript of RNA, U1 small nuclear 117, pseudogene, humanhuman

BASIC

Gene RNU1-117P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-117P-201ENST00000517041 SYNE4Q8N205 404 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 CPA6Q8N4T0 437 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 MB21D1Q8N884 522 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 MDM1Q8TC05 714 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 COA7Q96BR5 231 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 PRRX2Q99811 253 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 CPEB1Q9BZB8 566 aaKnown RBP2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 TDP1Q9NUW8 608 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 TUBD1Q9UJT1 453 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 DNM3Q9UQ16 869 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 ANKRD6Q9Y2G4 727 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 SIK3Q9Y2K2 1263 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 NEU2Q9Y3R4 380 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 CHST2Q9Y4C5 530 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 IPPQ9Y573 584 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 PCDHGA9Q9Y5G4 932 aaKnown RBP2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 PCDHGA8Q9Y5G5 932 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 PCDHGA7Q9Y5G6 932 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 PCDHGA6Q9Y5G7 932 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 PCDHGA3Q9Y5H0 932 aa2.84□□□□□ -1.95
RNU1-117P-201ENST00000517041 MARCH11A6NNE9 402 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 HTRA2O43464 458 aaPredicted RBP2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 ALDH1L1O75891 902 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 STC2O76061 302 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 ABLIM3O94929 683 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 POMCP01189 267 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 MTHFD1P11586 935 aaKnown RBP2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 ZSCAN20P17040 1043 aaPredicted RBP2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 DDCP20711 480 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 BMPR1AP36894 532 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 SCNN1GP51170 649 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 CCT2P78371 535 aaKnown RBP2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 ABHD18Q0P651 414 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 FAM50AQ14320 339 aaKnown RBP2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 SEPT2Q15019 361 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 ACAP1Q15027 740 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 PCBP2Q15366 365 aaKnown RBP eCLIP2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 MFSD14BQ5SR56 506 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 LRRC55Q6ZSA7 311 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 RHOUQ7L0Q8 258 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 GDF7Q7Z4P5 450 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 RHOT2Q8IXI1 618 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 FAM43AQ8N2R8 423 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 OR10H5Q8NGA6 315 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 NSUN6Q8TEA1 469 aaKnown RBP2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 ZNF483Q8TF39 744 aaPredicted RBP2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 NUP133Q8WUM0 1156 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 SLC25A43Q8WUT9 341 aaPredicted RBP2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 NRG4Q8WWG1 115 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 FUBP1Q96AE4 644 aaKnown RBP2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 CEP95Q96GE4 821 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 AIFM3Q96NN9 605 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 MED15Q96RN5 788 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 MRI1Q9BV20 369 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 ZNF747Q9BV97 191 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 KRTAP4-9Q9BYQ8 210 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 CCDC8Q9H0W5 538 aaPredicted RBP2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 DMRT3Q9NQL9 472 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 GNL3LQ9NVN8 582 aaKnown RBP2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 AJAP1Q9UKB5 411 aaPredicted RBP2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 FZD1Q9UP38 647 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 MYBBP1AQ9BQG0 1328 aaKnown RBP2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 ZMYM3Q14202 1370 aa2.83□□□□□ -1.96
RNU1-117P-201ENST00000517041 RNASET2O00584 256 aaKnown RBP2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 HAUS5O94927 633 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 ZRANB2O95218 330 aaKnown RBP eCLIP2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 ITGB1P05556 798 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 RAP2AP10114 183 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 C6P13671 934 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 INSRRP14616 1297 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 LAG3P18627 525 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 HK1P19367 917 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 GCSHP23434 173 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 CYP2C19P33261 490 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 ALDH1A3P47895 512 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 KIF23Q02241 960 aaPredicted RBP2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 CREMQ03060 361 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 MCL1Q07820 350 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 PUM1Q14671 1186 aaKnown RBP eCLIP2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 TTF1Q15361 905 aaPredicted RBP2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 FAM214AQ32MH5 1076 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 LSM12Q3MHD2 195 aaKnown RBP2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 PABPC1LQ4VXU2 614 aaKnown RBP2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 AGAP9Q5VTM2 703 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 AFMIDQ63HM1 303 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 CXorf57Q6NSI4 855 aaKnown RBP2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 PDSS2Q86YH6 399 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 PRR18Q8N4B5 295 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 AOPEPQ8N6M6 819 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 IFI44Q8TCB0 444 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 STAG1Q8WVM7 1258 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 HAS1Q92839 578 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 EXTL1Q92935 676 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 HSPBAP1Q96EW2 488 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 MYEOVQ96EZ4 313 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 MRGPRX4Q96LA9 322 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 FAM193BQ96PV7 902 aaPredicted RBP2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 PLEKHG4BQ96PX9 1271 aa2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 SMAD5Q99717 465 aaKnown RBP2.82□□□□□ -1.96
RNU1-117P-201ENST00000517041 SIK2Q9H0K1 926 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms