RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 UNC13DQ70J99 1090 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 PPP2R3CQ969Q6 453 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 PPP1R10Q96QC0 940 aaKnown RBP12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 TCF25Q9BQ70 676 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 BLZF1Q9H2G9 400 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 EXOC7Q9UPT5 735 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 IRAK3Q9Y616 596 aa12.18□□□□□ -0.46
SCARNA20-201ENST00000516768 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 TTC26A0AVF1 554 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 GOLGA6L4A6NEF3 574 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 MYL1P05976 194 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 CTSAP10619 480 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 ADSSP30520 456 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 GTF2F1P35269 517 aaKnown RBP eCLIP12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 POU5F1Q01860 360 aaKnown RBP12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 TAS1R1Q7RTX1 841 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 ADGRD2Q7Z7M1 963 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 RBM23Q86U06 439 aaKnown RBP12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 GRAMD1CQ8IYS0 662 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 FSIP1Q8NA03 581 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 ZNF507Q8TCN5 953 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 RABGGTAQ92696 567 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 HPS3Q969F9 1004 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 PABPC5Q96DU9 382 aaKnown RBP12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 ZMAT2Q96NC0 199 aaKnown RBP12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 PAAF1Q9BRP4 392 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 VN1R3Q9BXE9 311 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 FGFBP2Q9BYJ0 223 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 IKZF4Q9H2S9 585 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 GOLPH3LQ9H4A5 285 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 IGFLR1Q9H665 355 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 TLE6Q9H808 572 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 TMEM206Q9H813 350 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 MARCH5Q9NX47 278 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 CHMP5Q9NZZ3 219 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 CNTN3Q9P232 1028 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 PRG3Q9Y2Y8 225 aaPredicted RBP12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 PCDHGC5Q9Y5F6 944 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 REV3LO60673 3130 aa12.17□□□□□ -0.46
SCARNA20-201ENST00000516768 C2orf71A6NGG8 1288 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 HIDE1A8MVS5 230 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 TISP43B9A030 160 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 F8W810 466 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 PER2O15055 1255 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 KLRC4O43908 158 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 LILRB3O75022 631 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 TADA2AO75478 443 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 PRPF6O94906 941 aaKnown RBP12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 CSPG5O95196 566 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 HARSP12081 509 aaKnown RBP12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 LTBRP36941 435 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 TNFSF9P41273 254 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 NRIP1P48552 1158 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 MRPS5P82675 430 aaKnown RBP12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 PSMD2Q13200 908 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 SMC1AQ14683 1233 aaKnown RBP12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 ZBTB6Q15916 424 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 AAK1Q2M2I8 961 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 TPRNQ4KMQ1 711 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 GLRA4Q5JXX5 417 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 FAM26FQ5R3K3 315 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 DCLRE1AQ6PJP8 1040 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 KRBA2Q6ZNG9 492 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 STXBP4Q6ZWJ1 553 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 EPM2AIP1Q7L775 607 aaPredicted RBP12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 RNF168Q8IYW5 571 aaPredicted RBP12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 FMR1NBQ8N0W7 255 aaPredicted RBP12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 EFHBQ8N7U6 833 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 GLIS3Q8NEA6 775 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 DDX27Q96GQ7 796 aaKnown RBP12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 SNX27Q96L92 541 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 ASB2Q96Q27 587 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 TSPAN18Q96SJ8 248 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 CDCA3Q99618 268 aaPredicted RBP12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 MSTO1Q9BUK6 570 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 GPR62Q9BZJ7 368 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 ZBP1Q9H171 429 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 ENTPD7Q9NQZ7 604 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 CHST7Q9NS84 486 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 SLC38A7Q9NVC3 462 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 THEGQ9P2T0 379 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 CACNG4Q9UBN1 327 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 CPSF3Q9UKF6 684 aaKnown RBP12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 ADAM28Q9UKQ2 775 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 AGO2Q9UKV8 859 aaKnown RBP12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 KIAA1671Q9BY89 1806 aa12.16□□□□□ -0.46
SCARNA20-201ENST00000516768 CASTOR2A6NHX0 329 aa12.15□□□□□ -0.46
SCARNA20-201ENST00000516768 LACTBL1A8MY62 500 aa12.15□□□□□ -0.46
SCARNA20-201ENST00000516768 EIF3DO15371 548 aaKnown RBP eCLIP12.15□□□□□ -0.46
SCARNA20-201ENST00000516768 SOD2P04179 222 aa12.15□□□□□ -0.46
SCARNA20-201ENST00000516768 CXCL8P10145 99 aa12.15□□□□□ -0.46
SCARNA20-201ENST00000516768 GARTP22102 1010 aa12.15□□□□□ -0.46
SCARNA20-201ENST00000516768 HOXD13P35453 343 aa12.15□□□□□ -0.46
SCARNA20-201ENST00000516768 ACOT2P49753 483 aa12.15□□□□□ -0.46
SCARNA20-201ENST00000516768 TFF2Q03403 129 aa12.15□□□□□ -0.46
SCARNA20-201ENST00000516768 SOX4Q06945 474 aaPredicted RBP12.15□□□□□ -0.46
SCARNA20-201ENST00000516768 SNW1Q13573 536 aaKnown RBP12.15□□□□□ -0.46
SCARNA20-201ENST00000516768 KCNC3Q14003 757 aa12.15□□□□□ -0.46
SCARNA20-201ENST00000516768 HSP90AA2PQ14568 343 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 258 ms