RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 HOXD12P35452 270 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 P2RY2P41231 377 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 VIPR2P41587 438 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 RARSP54136 660 aaKnown RBP2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 CLDN6P56747 220 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 SEMG2Q02383 582 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 CALD1Q05682 793 aaKnown RBP2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 VAC14Q08AM6 782 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 SCRN1Q12765 414 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 KARSQ15046 597 aaKnown RBP2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 PGM5Q15124 567 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 PON2Q15165 354 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 ELF2Q15723 593 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 MAPK6Q16659 721 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 TBC1D25Q3MII6 688 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 ARL13BQ3SXY8 428 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 TNNI3KQ59H18 835 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 TSHZ3Q63HK5 1081 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 KCNV1Q6PIU1 500 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 METTL7BQ6UX53 244 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 LRRC69Q6ZNQ3 347 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 CYFIP1Q7L576 1253 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 ZC3H18Q86VM9 953 aaKnown RBP2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 TMPRSS12Q86WS5 348 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 RALGPS2Q86X27 583 aaPredicted RBP2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 GSTCDQ8NEC7 633 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 SPATA3Q8NHX4 192 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 C1orf216Q8TAB5 229 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 TRAPPC12Q8WVT3 735 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 PIGKQ92643 395 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 PHKBQ93100 1093 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 MIB2Q96AX9 1013 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 EAF2Q96CJ1 260 aaPredicted RBP2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 TCEAL4Q96EI5 215 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 MSANTD3Q96H12 275 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 B3GALT6Q96L58 329 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 INPP4AQ96PE3 977 aaPredicted RBP2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 HHIPQ96QV1 700 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 RMDN3Q96TC7 470 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 HERC2P3Q9BVR0 1158 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 EMILIN2Q9BXX0 1053 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 LRRC3Q9BY71 257 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 CRNKL1Q9BZJ0 848 aaKnown RBP2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 GPR62Q9BZJ7 368 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 C8orf33Q9H7E9 229 aaPredicted RBP2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 BRD9Q9H8M2 597 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 IL21RQ9HBE5 538 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 LRRC4CQ9HCJ2 640 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 MRPL17Q9NRX2 175 aaKnown RBP2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 SNTG2Q9NY99 539 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 GTSE1Q9NYZ3 720 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 PCDHB8Q9UN66 801 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 BTBD3Q9Y2F9 522 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 FPGT-TNNI3KV9GXZ4 949 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 HYDINQ4G0P3 5121 aa2.74□□□□□ -1.97
RNU1-48P-201ENST00000516400 IGKV6D-21A0A0A0MT36 114 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 PNMA6EA0A0J9YXQ4 647 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 A0A1W2PNU3 283 aaPredicted RBP2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 ANO9A1A5B4 782 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 SLC38A8A6NNN8 435 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 CHADO15335 359 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 HOXA2O43364 376 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 BRINP1O60477 761 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 NMT2O60551 498 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 ZC3H11AO75152 810 aaKnown RBP eCLIP2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 SEMA7AO75326 666 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 DXOO77932 396 aaKnown RBP2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 RPLP2P05387 115 aaKnown RBP2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 SSBP05455 408 aaKnown RBP eCLIP2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 ADH1AP07327 375 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 NDUFV2P19404 249 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 ATP4AP20648 1035 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 IGFBP6P24592 240 aaPredicted RBP2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 SLC1A4P43007 532 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 CRYBB1P53674 252 aaPredicted RBP2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 EPHA5P54756 1037 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 TMPRSS3P57727 454 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 KRT76Q01546 638 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 SRSF11Q05519 484 aaKnown RBP2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 DSC1Q08554 894 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 CCDC173Q0VFZ6 552 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 PPFIA1Q13136 1202 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 TARDBPQ13148 414 aaKnown RBP eCLIP2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 GRM4Q14833 912 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 NUMA1Q14980 2115 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 PLCB4Q15147 1175 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 DUOXA1Q1HG43 343 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 NAIF1Q69YI7 327 aaPredicted RBP2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 FBXL19Q6PCT2 694 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 C1orf228Q6PIY5 440 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 MTHFD1LQ6UB35 978 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 XKR5Q6UX68 686 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 CYP2U1Q7Z449 544 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 SLC41A1Q8IVJ1 513 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 COLGALT2Q8IYK4 626 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 MDGA1Q8NFP4 955 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 LNX1Q8TBB1 728 aaPredicted RBP2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 ING5Q8WYH8 240 aa2.73□□□□□ -1.97
RNU1-48P-201ENST00000516400 FAM20AQ96MK3 541 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms