RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	OLIG1	Q8TAK6	271 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	TRAPPC12	Q8WVT3	735 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	ZNF516	Q92618	1163 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	SEMA4D	Q92854	862 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	CCDC127	Q96BQ5	260 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	ERO1A	Q96HE7	468 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	ZBTB45	Q96K62	511 aa	Predicted RBP	4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	NAPG	Q99747	312 aa	Predicted RBP	4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	ACO2	Q99798	780 aa	Known RBP	4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	FAM213A	Q9BRX8	229 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	SYT11	Q9BT88	431 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	TUBB2B	Q9BVA1	445 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	MRPL4	Q9BYD3	311 aa	Known RBP	4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	IFIH1	Q9BYX4	1025 aa	Known RBP	4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	FZD8	Q9H461	694 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	TUT1	Q9H6E5	874 aa	Known RBP	4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	SUGCT	Q9HAC7	445 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	ZFYVE28	Q9HCC9	887 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	FLRT1	Q9NZU1	646 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	TRIM10	Q9UDY6	481 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	GJD2	Q9UKL4	321 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	AGO2	Q9UKV8	859 aa	Known RBP	4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	ZHX1	Q9UKY1	873 aa	Predicted RBP	4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	GUCA1B	Q9UMX6	200 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	TFR2	Q9UP52	801 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	GNE	Q9Y223	722 aa	Known RBP	4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	MRFAP1	Q9Y605	127 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	ATP8B3	O60423	1300 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	UTRN	P46939	3433 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	SI	P14410	1827 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	TRPM7	Q96QT4	1865 aa		4.86	□□□□□ -1.63
ATP2C1-223	ENST00000515854	WDR81	Q562E7	1941 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	ANO9	A1A5B4	782 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	CTAGE9	A4FU28	777 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	RRN3P2	A6NIE6	340 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	FOXN3	O00409	490 aa	Predicted RBP	4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	DDX3X	O00571	662 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	CLDN3	O15551	220 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	DYNC1LI2	O43237	492 aa	Predicted RBP	4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	ADCY6	O43306	1168 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	CA12	O43570	354 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	FAM189A1	O60320	539 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	LRRN2	O75325	713 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	TACC1	O75410	805 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	TOM1L1	O75674	476 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	PRKCB	P05771	671 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	PNMA6A	P0CW24	399 aa	Predicted RBP	4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	SRGAP2C	P0DJJ0	459 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	PROZ	P22891	400 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	RGS2	P41220	211 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	ACOT2	P49753	483 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	GSK3A	P49840	483 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	CLCN3	P51790	818 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	AP3M2	P53677	418 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	MFAP3	P55082	362 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	WNT7B	P56706	349 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	PRSS12	P56730	875 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	AMPD2	Q01433	879 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	MAP2K1	Q02750	393 aa	Predicted RBP	4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	ARID5A	Q03989	594 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	MBTD1	Q05BQ5	628 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	MCL1	Q07820	350 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	BMS1	Q14692	1282 aa	Known RBP	4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	NAB2	Q15742	525 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	MAPK6	Q16659	721 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	DGKD	Q16760	1214 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	FAM187B	Q17R55	369 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	ZACN	Q401N2	412 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	PRAMEF19	Q5SWL8	479 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	MARCH8	Q5T0T0	291 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	PAPD7	Q5XG87	772 aa	Known RBP	4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	MTHFD1L	Q6UB35	978 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	TSHZ1	Q6ZSZ6	1077 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	SV2A	Q7L0J3	742 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	VPS36	Q86VN1	386 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	RHPN2	Q8IUC4	686 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	BRSK2	Q8IWQ3	736 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	FBXL13	Q8NEE6	735 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	TRIM58	Q8NG06	486 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	HELQ	Q8TDG4	1101 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	TAS1R2	Q8TE23	839 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	SOCS4	Q8WXH5	440 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	SECISBP2L	Q93073	1101 aa	Known RBP	4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	ZBTB10	Q96DT7	871 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	FAM81B	Q96LP2	452 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	KREMEN1	Q96MU8	473 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	POP1	Q99575	1024 aa	Known RBP	4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	CGRRF1	Q99675	332 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	APBA2	Q99767	749 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	BEGAIN	Q9BUH8	593 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	MSTO1	Q9BUK6	570 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	CARD6	Q9BX69	1037 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	PTPRH	Q9HD43	1115 aa		4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	UBE2T	Q9NPD8	197 aa	Predicted RBP	4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	LUC7L	Q9NQ29	371 aa	Known RBP	4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	PRMT7	Q9NVM4	692 aa	Predicted RBP	4.85	□□□□□ -1.63
ATP2C1-223	ENST00000515854	RAB20	Q9NX57	234 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms