RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 PADI6Q6TGC4 694 aa20.3■□□□□ 0.84
SPOP-220ENST00000515508 DLGAP2Q9P1A6 1054 aa20.3■□□□□ 0.84
SPOP-220ENST00000515508 FANCMQ8IYD8 2048 aa20.3■□□□□ 0.84
SPOP-220ENST00000515508 DMXL1Q9Y485 3027 aa20.29■□□□□ 0.84
SPOP-220ENST00000515508 TRIP11Q15643 1979 aa20.29■□□□□ 0.84
SPOP-220ENST00000515508 STK25O00506 426 aa20.29■□□□□ 0.84
SPOP-220ENST00000515508 C8AP07357 584 aa20.29■□□□□ 0.84
SPOP-220ENST00000515508 POU2F2P09086 479 aa20.29■□□□□ 0.84
SPOP-220ENST00000515508 OR52Z1P0C646 297 aa20.29■□□□□ 0.84
SPOP-220ENST00000515508 MUTP22033 750 aa20.29■□□□□ 0.84
SPOP-220ENST00000515508 RFX1P22670 979 aa20.29■□□□□ 0.84
SPOP-220ENST00000515508 RBM25P49756 843 aaKnown RBP20.29■□□□□ 0.84
SPOP-220ENST00000515508 NEK4P51957 841 aa20.29■□□□□ 0.84
SPOP-220ENST00000515508 DCAF4L1Q3SXM0 396 aa20.29■□□□□ 0.84
SPOP-220ENST00000515508 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.29■□□□□ 0.84
SPOP-220ENST00000515508 GRASPQ7Z6J2 395 aaPredicted RBP20.29■□□□□ 0.84
SPOP-220ENST00000515508 CEP57Q86XR8 500 aa20.29■□□□□ 0.84
SPOP-220ENST00000515508 NOSTRINQ8IVI9 506 aa20.29■□□□□ 0.84
SPOP-220ENST00000515508 ADSSL1Q8N142 457 aa20.29■□□□□ 0.84
SPOP-220ENST00000515508 ERMNQ8TAM6 284 aa20.29■□□□□ 0.84
SPOP-220ENST00000515508 CDH7Q9ULB5 785 aa20.29■□□□□ 0.84
SPOP-220ENST00000515508 CACNA1AO00555 2505 aa20.28■□□□□ 0.84
SPOP-220ENST00000515508 MIA3Q5JRA6 1907 aa20.28■□□□□ 0.84
SPOP-220ENST00000515508 NOTCH4Q99466 2003 aa20.28■□□□□ 0.84
SPOP-220ENST00000515508 ARHGEF35A5YM69 484 aa20.28■□□□□ 0.84
SPOP-220ENST00000515508 TMEM189-UBE2V1I3L0A0 370 aa20.28■□□□□ 0.84
SPOP-220ENST00000515508 ADAM12O43184 909 aa20.28■□□□□ 0.84
SPOP-220ENST00000515508 PPP2R5AQ15172 486 aa20.28■□□□□ 0.84
SPOP-220ENST00000515508 SAFBQ15424 915 aaKnown RBP eCLIP20.28■□□□□ 0.84
SPOP-220ENST00000515508 TMEM132AQ24JP5 1023 aa20.28■□□□□ 0.84
SPOP-220ENST00000515508 PPM1LQ5SGD2 360 aa20.28■□□□□ 0.84
SPOP-220ENST00000515508 EEF1DP3Q658K8 133 aa20.28■□□□□ 0.84
SPOP-220ENST00000515508 DEPTORQ8TB45 409 aa20.28■□□□□ 0.84
SPOP-220ENST00000515508 FGF14Q92915 247 aa20.28■□□□□ 0.84
SPOP-220ENST00000515508 SEMA4AQ9H3S1 761 aa20.28■□□□□ 0.84
SPOP-220ENST00000515508 USP20Q9Y2K6 914 aa20.28■□□□□ 0.84
SPOP-220ENST00000515508 EP300Q09472 2414 aaPredicted RBP20.27■□□□□ 0.84
SPOP-220ENST00000515508 FGFR3P22607 806 aa20.27■□□□□ 0.84
SPOP-220ENST00000515508 EFNA5P52803 228 aa20.27■□□□□ 0.84
SPOP-220ENST00000515508 NTHL1P78549 312 aa20.27■□□□□ 0.84
SPOP-220ENST00000515508 RAB33AQ14088 237 aa20.27■□□□□ 0.84
SPOP-220ENST00000515508 HAUS3Q68CZ6 603 aa20.27■□□□□ 0.84
SPOP-220ENST00000515508 DCLRE1AQ6PJP8 1040 aa20.27■□□□□ 0.84
SPOP-220ENST00000515508 PPP1R10Q96QC0 940 aaKnown RBP20.27■□□□□ 0.84
SPOP-220ENST00000515508 SIT1Q9Y3P8 196 aa20.27■□□□□ 0.84
SPOP-220ENST00000515508 PATJQ8NI35 1801 aa20.26■□□□□ 0.83
SPOP-220ENST00000515508 XYLBO75191 536 aa20.26■□□□□ 0.83
SPOP-220ENST00000515508 STARD6P59095 220 aa20.26■□□□□ 0.83
SPOP-220ENST00000515508 GUCY1B3Q02153 619 aa20.26■□□□□ 0.83
SPOP-220ENST00000515508 PARM1Q6UWI2 310 aa20.26■□□□□ 0.83
SPOP-220ENST00000515508 MTSS1LQ765P7 747 aa20.26■□□□□ 0.83
SPOP-220ENST00000515508 RTL10Q7L3V2 364 aa20.26■□□□□ 0.83
SPOP-220ENST00000515508 PJA1Q8NG27 643 aa20.26■□□□□ 0.83
SPOP-220ENST00000515508 SLC7A14Q8TBB6 771 aa20.26■□□□□ 0.83
SPOP-220ENST00000515508 FGF13Q92913 245 aa20.26■□□□□ 0.83
SPOP-220ENST00000515508 RPP25Q9BUL9 199 aaKnown RBP20.26■□□□□ 0.83
SPOP-220ENST00000515508 KIFC3Q9BVG8 833 aa20.26■□□□□ 0.83
SPOP-220ENST00000515508 FOXP1Q9H334 677 aaPredicted RBP20.26■□□□□ 0.83
SPOP-220ENST00000515508 MTRRQ9UBK8 725 aa20.26■□□□□ 0.83
SPOP-220ENST00000515508 GDAQ9Y2T3 454 aa20.26■□□□□ 0.83
SPOP-220ENST00000515508 CCL16O15467 120 aa20.25■□□□□ 0.83
SPOP-220ENST00000515508 DCNP07585 359 aaKnown RBP20.25■□□□□ 0.83
SPOP-220ENST00000515508 LIG1P18858 919 aa20.25■□□□□ 0.83
SPOP-220ENST00000515508 ZNF174Q15697 407 aa20.25■□□□□ 0.83
SPOP-220ENST00000515508 UVSSAQ2YD98 709 aa20.25■□□□□ 0.83
SPOP-220ENST00000515508 SPECC1Q5M775 1068 aa20.25■□□□□ 0.83
SPOP-220ENST00000515508 AXDND1Q5T1B0 1012 aaPredicted RBP20.25■□□□□ 0.83
SPOP-220ENST00000515508 ATF7IP2Q5U623 682 aa20.25■□□□□ 0.83
SPOP-220ENST00000515508 ST13P5Q8NFI4 369 aaPredicted RBP20.25■□□□□ 0.83
SPOP-220ENST00000515508 KIFAP3Q92845 792 aa20.25■□□□□ 0.83
SPOP-220ENST00000515508 IFT74Q96LB3 600 aa20.25■□□□□ 0.83
SPOP-220ENST00000515508 COL4A3Q01955 1670 aa20.25■□□□□ 0.83
SPOP-220ENST00000515508 IGFBP6P24592 240 aaPredicted RBP20.24■□□□□ 0.83
SPOP-220ENST00000515508 OR1D2P34982 312 aa20.24■□□□□ 0.83
SPOP-220ENST00000515508 FXR2P51116 673 aaKnown RBP eCLIP20.24■□□□□ 0.835e-6■■□□□ 12.9
SPOP-220ENST00000515508 CLCNKBP51801 687 aa20.24■□□□□ 0.83
SPOP-220ENST00000515508 GPC5P78333 572 aa20.24■□□□□ 0.83
SPOP-220ENST00000515508 ECM1Q16610 540 aa20.24■□□□□ 0.83
SPOP-220ENST00000515508 UPP1Q16831 310 aa20.24■□□□□ 0.83
SPOP-220ENST00000515508 GLRA4Q5JXX5 417 aa20.24■□□□□ 0.83
SPOP-220ENST00000515508 NT5DC1Q5TFE4 455 aa20.24■□□□□ 0.83
SPOP-220ENST00000515508 CD300LGQ6UXG3 332 aa20.24■□□□□ 0.83
SPOP-220ENST00000515508 SHDQ96IW2 340 aa20.24■□□□□ 0.83
SPOP-220ENST00000515508 C8orf76Q96K31 380 aa20.24■□□□□ 0.83
SPOP-220ENST00000515508 UROC1Q96N76 676 aa20.24■□□□□ 0.83
SPOP-220ENST00000515508 DDX23Q9BUQ8 820 aaKnown RBP20.24■□□□□ 0.83
SPOP-220ENST00000515508 FOXQ1Q9C009 403 aa20.24■□□□□ 0.83
SPOP-220ENST00000515508 BHMT2Q9H2M3 363 aa20.24■□□□□ 0.83
SPOP-220ENST00000515508 POLIQ9UNA4 740 aa20.24■□□□□ 0.83
SPOP-220ENST00000515508 OTOGLQ3ZCN5 2332 aa20.24■□□□□ 0.83
SPOP-220ENST00000515508 B3GAT3O94766 335 aa20.23■□□□□ 0.83
SPOP-220ENST00000515508 LMNAP02545 664 aaKnown RBP20.23■□□□□ 0.83
SPOP-220ENST00000515508 GLULP15104 373 aa20.23■□□□□ 0.83
SPOP-220ENST00000515508 TRAPPC10P48553 1259 aa20.23■□□□□ 0.83
SPOP-220ENST00000515508 TTC38Q5R3I4 469 aa20.23■□□□□ 0.83
SPOP-220ENST00000515508 RSPO2Q6UXX9 243 aaPredicted RBP20.23■□□□□ 0.83
SPOP-220ENST00000515508 ERMP1Q7Z2K6 904 aa20.23■□□□□ 0.83
SPOP-220ENST00000515508 C1orf210Q8IVY1 113 aa20.23■□□□□ 0.83
SPOP-220ENST00000515508 NPAS3Q8IXF0 933 aa20.23■□□□□ 0.83
SPOP-220ENST00000515508 C3orf58Q8NDZ4 430 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms