RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 THP07101 528 aa17.43■□□□□ 0.38
LMNA-223ENST00000515459 UBXN2BQ14CS0 331 aa17.43■□□□□ 0.38
LMNA-223ENST00000515459 PPP4R3CPQ6ZMV5 832 aa17.43■□□□□ 0.38
LMNA-223ENST00000515459 ITFG1Q8TB96 612 aa17.43■□□□□ 0.38
LMNA-223ENST00000515459 PIGOQ8TEQ8 1089 aa17.43■□□□□ 0.38
LMNA-223ENST00000515459 TTC12Q9H892 705 aaPredicted RBP17.43■□□□□ 0.38
LMNA-223ENST00000515459 PTGESO14684 152 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 SPTLC1O15269 473 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 USO1O60763 962 aaKnown RBP17.42■□□□□ 0.38
LMNA-223ENST00000515459 POU2F2P09086 479 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 XRCC6P12956 609 aaKnown RBP eCLIP17.42■□□□□ 0.38
LMNA-223ENST00000515459 KRT2P35908 639 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 MAGEA9P43362 315 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 NR5A1Q13285 461 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 CALCRLQ16602 461 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 UVSSAQ2YD98 709 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 RSPO2Q6UXX9 243 aaPredicted RBP17.42■□□□□ 0.38
LMNA-223ENST00000515459 MAEAQ7L5Y9 396 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 ZBTB8OSQ8IWT0 167 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 SLC7A14Q8TBB6 771 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 WASF1Q92558 559 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 KXD1Q9BQD3 176 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 BRMS1Q9HCU9 246 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 GPRC5CQ9NQ84 441 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 SNTG2Q9NY99 539 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 MTF2Q9Y483 593 aaPredicted RBP17.42■□□□□ 0.38
LMNA-223ENST00000515459 NOTCH4Q99466 2003 aa17.42■□□□□ 0.38
LMNA-223ENST00000515459 FAM170BA6NMN3 283 aa17.41■□□□□ 0.38
LMNA-223ENST00000515459 N4BP3O15049 544 aa17.41■□□□□ 0.38
LMNA-223ENST00000515459 ADAM12O43184 909 aa17.41■□□□□ 0.38
LMNA-223ENST00000515459 OR1D2P34982 312 aa17.41■□□□□ 0.38
LMNA-223ENST00000515459 RAB33AQ14088 237 aa17.41■□□□□ 0.38
LMNA-223ENST00000515459 FAM187BQ17R55 369 aa17.41■□□□□ 0.38
LMNA-223ENST00000515459 TMEM132AQ24JP5 1023 aa17.41■□□□□ 0.38
LMNA-223ENST00000515459 PABPC1LQ4VXU2 614 aaKnown RBP17.41■□□□□ 0.38
LMNA-223ENST00000515459 VARS2Q5ST30 1063 aaKnown RBP17.41■□□□□ 0.38
LMNA-223ENST00000515459 AXDND1Q5T1B0 1012 aaPredicted RBP17.41■□□□□ 0.38
LMNA-223ENST00000515459 CDCA2Q69YH5 1023 aaPredicted RBP17.41■□□□□ 0.38
LMNA-223ENST00000515459 MCPH1Q8NEM0 835 aa17.41■□□□□ 0.38
LMNA-223ENST00000515459 ATRIPQ8WXE1 791 aa17.41■□□□□ 0.38
LMNA-223ENST00000515459 FZD8Q9H461 694 aa17.41■□□□□ 0.38
LMNA-223ENST00000515459 LTB4R2Q9NPC1 389 aa17.41■□□□□ 0.38
LMNA-223ENST00000515459 NCDNQ9UBB6 729 aa17.41■□□□□ 0.38
LMNA-223ENST00000515459 KCNH3Q9ULD8 1083 aa17.41■□□□□ 0.38
LMNA-223ENST00000515459 PCDHGA2Q9Y5H1 932 aa17.41■□□□□ 0.38
LMNA-223ENST00000515459 A0A087WWV3 80 aa17.4■□□□□ 0.38
LMNA-223ENST00000515459 PFKFB2O60825 505 aa17.4■□□□□ 0.38
LMNA-223ENST00000515459 DTNBO60941 627 aa17.4■□□□□ 0.38
LMNA-223ENST00000515459 RECQL4O94761 1208 aa17.4■□□□□ 0.38
LMNA-223ENST00000515459 CD72P21854 359 aa17.4■□□□□ 0.38
LMNA-223ENST00000515459 TXKP42681 527 aa17.4■□□□□ 0.38
LMNA-223ENST00000515459 CSTF1Q05048 431 aaKnown RBP17.4■□□□□ 0.38
LMNA-223ENST00000515459 NAB2Q15742 525 aa17.4■□□□□ 0.38
LMNA-223ENST00000515459 RSPO4Q2I0M5 234 aaPredicted RBP17.4■□□□□ 0.38
LMNA-223ENST00000515459 ZBTB41Q5SVQ8 909 aa17.4■□□□□ 0.38
LMNA-223ENST00000515459 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.4■□□□□ 0.38
LMNA-223ENST00000515459 RTL10Q7L3V2 364 aa17.4■□□□□ 0.38
LMNA-223ENST00000515459 NPAS3Q8IXF0 933 aa17.4■□□□□ 0.38
LMNA-223ENST00000515459 TNFRSF25Q93038 417 aa17.4■□□□□ 0.38
LMNA-223ENST00000515459 NELL2Q99435 816 aa17.4■□□□□ 0.38
LMNA-223ENST00000515459 ADPGKQ9BRR6 497 aa17.4■□□□□ 0.38
LMNA-223ENST00000515459 PDZD7Q9H5P4 517 aa17.4■□□□□ 0.38
LMNA-223ENST00000515459 HCFC1R1Q9NWW0 138 aa17.4■□□□□ 0.38
LMNA-223ENST00000515459 DNMT3BQ9UBC3 853 aaKnown RBP17.4■□□□□ 0.38
LMNA-223ENST00000515459 ORC3Q9UBD5 711 aaPredicted RBP17.4■□□□□ 0.38
LMNA-223ENST00000515459 CEP250Q9BV73 2442 aa17.39■□□□□ 0.37
LMNA-223ENST00000515459 TTLL13PA6NNM8 815 aa17.39■□□□□ 0.37
LMNA-223ENST00000515459 NCAM2O15394 837 aa17.39■□□□□ 0.37
LMNA-223ENST00000515459 NEMFO60524 1076 aa17.39■□□□□ 0.37
LMNA-223ENST00000515459 ATP2B1P20020 1258 aa17.39■□□□□ 0.37
LMNA-223ENST00000515459 PRPF4BQ13523 1007 aaKnown RBP17.39■□□□□ 0.37
LMNA-223ENST00000515459 MAPK6Q16659 721 aa17.39■□□□□ 0.37
LMNA-223ENST00000515459 NOSTRINQ8IVI9 506 aa17.39■□□□□ 0.37
LMNA-223ENST00000515459 GPR161Q8N6U8 529 aaKnown RBP17.39■□□□□ 0.37
LMNA-223ENST00000515459 C2orf40Q9H1Z8 148 aa17.39■□□□□ 0.37
LMNA-223ENST00000515459 CXCL16Q9H2A7 254 aa17.39■□□□□ 0.37
LMNA-223ENST00000515459 MTRRQ9UBK8 725 aa17.39■□□□□ 0.37
LMNA-223ENST00000515459 TPCN1Q9ULQ1 816 aa17.39■□□□□ 0.37
LMNA-223ENST00000515459 MRPS23Q9Y3D9 190 aaKnown RBP17.39■□□□□ 0.37
LMNA-223ENST00000515459 ECI2O75521 394 aa17.38■□□□□ 0.37
LMNA-223ENST00000515459 CTDNEP1O95476 244 aa17.38■□□□□ 0.37
LMNA-223ENST00000515459 SPATA31C1P0DKV0 1188 aa17.38■□□□□ 0.37
LMNA-223ENST00000515459 SDHBP21912 280 aa17.38■□□□□ 0.37
LMNA-223ENST00000515459 FGFR3P22607 806 aa17.38■□□□□ 0.37
LMNA-223ENST00000515459 TPRG1Q6ZUI0 275 aa17.38■□□□□ 0.37
LMNA-223ENST00000515459 ZBTB44Q8NCP5 570 aa17.38■□□□□ 0.37
LMNA-223ENST00000515459 ING5Q8WYH8 240 aa17.38■□□□□ 0.37
LMNA-223ENST00000515459 SECISBP2LQ93073 1101 aaKnown RBP17.38■□□□□ 0.37
LMNA-223ENST00000515459 CLDN23Q96B33 292 aa17.38■□□□□ 0.37
LMNA-223ENST00000515459 ZSCAN32Q9NX65 697 aa17.38■□□□□ 0.37
LMNA-223ENST00000515459 GDAQ9Y2T3 454 aa17.38■□□□□ 0.37
LMNA-223ENST00000515459 CDY1Q9Y6F8 540 aa17.38■□□□□ 0.37
LMNA-223ENST00000515459 FRYLO94915 3013 aa17.37■□□□□ 0.37
LMNA-223ENST00000515459 TMEM189-UBE2V1I3L0A0 370 aa17.37■□□□□ 0.37
LMNA-223ENST00000515459 ACKR2O00590 384 aa17.37■□□□□ 0.37
LMNA-223ENST00000515459 B3GAT3O94766 335 aa17.37■□□□□ 0.37
LMNA-223ENST00000515459 PRKCBP05771 671 aa17.37■□□□□ 0.37
LMNA-223ENST00000515459 TARSP26639 723 aaKnown RBP17.37■□□□□ 0.37
LMNA-223ENST00000515459 RPS9P46781 194 aaKnown RBP17.37■□□□□ 0.37
LMNA-223ENST00000515459 RBM25P49756 843 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms