RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 CT47B1P0C2W7 299 aaPredicted RBP4.69□□□□□ -1.66
CAST-242ENST00000515063 BPIP17213 487 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 ACVRL1P37023 503 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 WNT3AP56704 352 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 PPARAQ07869 468 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 ACAP1Q15027 740 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 LSM12Q3MHD2 195 aaKnown RBP4.69□□□□□ -1.66
CAST-242ENST00000515063 CT47A1Q5JQC4 288 aaPredicted RBP4.69□□□□□ -1.66
CAST-242ENST00000515063 EGFLAMQ63HQ2 1017 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 GGT6Q6P531 493 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 APBB1IPQ7Z5R6 666 aaPredicted RBP4.69□□□□□ -1.66
CAST-242ENST00000515063 WDR63Q8IWG1 891 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 OR14C36Q8NHC7 312 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 IL17DQ8TAD2 202 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 CACTINQ8WUQ7 758 aaKnown RBP4.69□□□□□ -1.66
CAST-242ENST00000515063 RUNDC1Q96C34 613 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 CFAP53Q96M91 514 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 ZNF512Q96ME7 567 aaPredicted RBP4.69□□□□□ -1.66
CAST-242ENST00000515063 ACAP3Q96P50 834 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 SORCS2Q96PQ0 1159 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 SOX7Q9BT81 388 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 EPC1Q9H2F5 836 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 VIRMAQ69YN4 1812 aaKnown RBP4.69□□□□□ -1.66
CAST-242ENST00000515063 MYO5BQ9ULV0 1848 aa4.69□□□□□ -1.66
CAST-242ENST00000515063 ABCC11Q96J66 1382 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 PRSS38A1L453 326 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 NPIPB8E9PQR5 432 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 APAF1O14727 1248 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 PPFIA4O75335 1185 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 LY86O95711 162 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 HMGB1P09429 215 aaKnown RBP4.68□□□□□ -1.66
CAST-242ENST00000515063 MANFP55145 182 aaKnown RBP4.68□□□□□ -1.66
CAST-242ENST00000515063 FAPQ12884 760 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 TUBA3CQ13748 450 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 RRP1BQ14684 758 aaKnown RBP4.68□□□□□ -1.66
CAST-242ENST00000515063 DCAF17Q5H9S7 520 aaPredicted RBP4.68□□□□□ -1.66
CAST-242ENST00000515063 GJC2Q5T442 439 aaPredicted RBP4.68□□□□□ -1.66
CAST-242ENST00000515063 SPTY2D1Q68D10 685 aaPredicted RBP4.68□□□□□ -1.66
CAST-242ENST00000515063 TUBA3EQ6PEY2 450 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 RNF180Q86T96 592 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 MORC1Q86VD1 984 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 Q8N1X5 172 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 ZCRB1Q8TBF4 217 aaKnown RBP4.68□□□□□ -1.66
CAST-242ENST00000515063 CHAC2Q8WUX2 184 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 ST8SIA2Q92186 375 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 GPR87Q9BY21 358 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.68□□□□□ -1.66
CAST-242ENST00000515063 HECAQ9UBI9 543 aaPredicted RBP4.68□□□□□ -1.66
CAST-242ENST00000515063 CLCA2Q9UQC9 943 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 PPP2R3BQ9Y5P8 575 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 HS3ST3A1Q9Y663 406 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 SPATA31D1Q6ZQQ2 1576 aa4.68□□□□□ -1.66
CAST-242ENST00000515063 CDC42BPGQ6DT37 1551 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 DIP2BQ9P265 1576 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 ADH4P08319 380 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 C1SP09871 688 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 GYPEP15421 78 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 MAKP20794 623 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 IBSPP21815 317 aaPredicted RBP4.67□□□□□ -1.66
CAST-242ENST00000515063 DUSP2Q05923 314 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 CD69Q07108 199 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 MGAT5Q09328 741 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 IDI1Q13907 227 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 METTL24Q5JXM2 366 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 CCDC62Q6P9F0 684 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 TAS1R1Q7RTX1 841 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 HDGFL2Q7Z4V5 671 aaPredicted RBP4.67□□□□□ -1.66
CAST-242ENST00000515063 THNSL2Q86YJ6 484 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 GLB1L3Q8NCI6 653 aaPredicted RBP4.67□□□□□ -1.66
CAST-242ENST00000515063 MDGA1Q8NFP4 955 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 OR5M3Q8NGP4 307 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 ATXN2LQ8WWM7 1075 aaKnown RBP4.67□□□□□ -1.66
CAST-242ENST00000515063 RAX2Q96IS3 184 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 PDCD2LQ9BRP1 358 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 ANO3Q9BYT9 981 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 PNNQ9H307 717 aaKnown RBP4.67□□□□□ -1.66
CAST-242ENST00000515063 SPC25Q9HBM1 224 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 PRSS50Q9UI38 385 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 ALKQ9UM73 1620 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 PTPRMP28827 1452 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 IL16Q14005 1332 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 KIF20BQ96Q89 1820 aa4.67□□□□□ -1.66
CAST-242ENST00000515063 SETD1AO15047 1707 aaKnown RBP4.66□□□□□ -1.66
CAST-242ENST00000515063 KNDC1Q76NI1 1749 aa4.66□□□□□ -1.66
CAST-242ENST00000515063 YTHDC2Q9H6S0 1430 aaKnown RBP4.66□□□□□ -1.66
CAST-242ENST00000515063 A0A1W2PR48 441 aa4.66□□□□□ -1.66
CAST-242ENST00000515063 DNAJC6O75061 913 aa4.66□□□□□ -1.66
CAST-242ENST00000515063 LTA4HP09960 611 aaKnown RBP4.66□□□□□ -1.66
CAST-242ENST00000515063 HMGA2P52926 109 aa4.66□□□□□ -1.66
CAST-242ENST00000515063 STRN3Q13033 797 aa4.66□□□□□ -1.66
CAST-242ENST00000515063 FSCN1Q16658 493 aaKnown RBP4.66□□□□□ -1.66
CAST-242ENST00000515063 FAM177A1Q8N128 213 aaPredicted RBP4.66□□□□□ -1.66
CAST-242ENST00000515063 MB21D1Q8N884 522 aa4.66□□□□□ -1.66
CAST-242ENST00000515063 PIK3C3Q8NEB9 887 aa4.66□□□□□ -1.66
CAST-242ENST00000515063 ZNF483Q8TF39 744 aaPredicted RBP4.66□□□□□ -1.66
CAST-242ENST00000515063 IL17RAQ96F46 866 aa4.66□□□□□ -1.66
CAST-242ENST00000515063 SCAND2PQ9GZW5 306 aaPredicted RBP4.66□□□□□ -1.66
CAST-242ENST00000515063 SLC12A5Q9H2X9 1139 aa4.66□□□□□ -1.66
CAST-242ENST00000515063 ING3Q9NXR8 418 aa4.66□□□□□ -1.66
CAST-242ENST00000515063 TERF2IPQ9NYB0 399 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms