RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 TPD52L1Q16890 204 aaPredicted RBP13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 TMEM240Q5SV17 173 aa13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 ZBTB41Q5SVQ8 909 aa13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 USP37Q86T82 979 aa13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 CBWD2Q8IUF1 395 aa13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 NPAS4Q8IUM7 802 aa13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 TRIM59Q8IWR1 403 aa13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 FAM186BQ8IYM0 893 aa13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 THNSL1Q8IYQ7 743 aa13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 CEP120Q8N960 986 aa13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 ZSWIM2Q8NEG5 633 aa13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 SAAL1Q96ER3 474 aa13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 SNX27Q96L92 541 aa13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 RPF1Q9H9Y2 349 aaKnown RBP13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 FANCLQ9NW38 375 aa13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 RBAKQ9NYW8 714 aaPredicted RBP13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 CNTN3Q9P232 1028 aa13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 ARMCX3Q9UH62 379 aaPredicted RBP13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 ZMYND8Q9ULU4 1186 aaPredicted RBP13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 DERAQ9Y315 318 aa13.02□□□□□ -0.33
PDLIM5-220ENST00000514830 GOLGA8IPA6NC78 632 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 GOLGA8JA6NMD2 632 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 PMM2O15305 246 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 MEFVO15553 781 aaPredicted RBP13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 RECQL4O94761 1208 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 AMHP03971 560 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 KCNE1P15382 129 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 TNFSF9P41273 254 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 YARSP54577 528 aaKnown RBP13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 EPHB4P54760 987 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 WDR5P61964 334 aaKnown RBP13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 TPM4P67936 248 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 BFSP1Q12934 665 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 SLC10A6Q3KNW5 377 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 CEP135Q66GS9 1140 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 AGMOQ6ZNB7 445 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 ZNF365Q70YC5 407 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 LUZP1Q86V48 1076 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 GAS2L3Q86XJ1 694 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 TMEM192Q8IY95 271 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 PHOSPHO2Q8TCD6 241 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 PARD3BQ8TEW8 1205 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 TOP1MTQ969P6 601 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.01□□□□□ -0.339e-7■□□□□ 10.7
PDLIM5-220ENST00000514830 SAMSN1Q9NSI8 373 aaKnown RBP13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 SNTG2Q9NY99 539 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 C2CD2Q9Y426 696 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 SZT2Q5T011 3432 aa13.01□□□□□ -0.33
PDLIM5-220ENST00000514830 KCNJ18B7U540 433 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 GOLGA6L19H0YKK7 550 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 SOX1O00570 391 aaPredicted RBP13□□□□□ -0.33
PDLIM5-220ENST00000514830 STX10O60499 249 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 CXCL8P10145 99 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 ACRP10323 421 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 HARSP12081 509 aaKnown RBP13□□□□□ -0.33
PDLIM5-220ENST00000514830 KRT13P13646 458 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 GTF2H1P32780 548 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 AP3M2P53677 418 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 KCNJ12Q14500 433 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 ZBTB6Q15916 424 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 TCP11X2Q5H9J9 407 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 WDR49Q8IV35 697 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 GSTCDQ8NEC7 633 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 SLC35C1Q96A29 364 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 CNOT6LQ96LI5 555 aaKnown RBP13□□□□□ -0.33
PDLIM5-220ENST00000514830 MTIF3Q9H2K0 278 aaKnown RBP13□□□□□ -0.33
PDLIM5-220ENST00000514830 RSAD1Q9HA92 442 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 RNF19AQ9NV58 838 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 MAGEC2Q9UBF1 373 aaPredicted RBP13□□□□□ -0.33
PDLIM5-220ENST00000514830 LIMA1Q9UHB6 759 aaKnown RBP13□□□□□ -0.33
PDLIM5-220ENST00000514830 HES2Q9Y543 173 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 PCDHB7Q9Y5E2 793 aa13□□□□□ -0.33
PDLIM5-220ENST00000514830 LACTBL1A8MY62 500 aa12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 OFD1O75665 1012 aa12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 MAGEA10P43363 369 aaPredicted RBP12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 VAMP7P51809 220 aa12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 UVSSAQ2YD98 709 aa12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 CCDC40Q4G0X9 1142 aa12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 SEZ6Q53EL9 994 aa12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 C1orf220Q5T0J3 134 aa12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 APTXQ7Z2E3 356 aaKnown RBP12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 PLEKHO2Q8TD55 490 aa12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 EEF2KMTQ96G04 330 aa12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 SLC9A7Q96T83 725 aa12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 CGRRF1Q99675 332 aa12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 RBSNQ9H1K0 784 aa12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 RC3H2Q9HBD1 1191 aaKnown RBP12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 KANSL3Q9P2N6 904 aa12.99□□□□□ -0.33
PDLIM5-220ENST00000514830 SMIM28A0A1B0GU29 152 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 ARL5CA6NH57 179 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 MEIS3P2A8K0S8 358 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 PTGESO14684 152 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 P4HA2O15460 535 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 XPOTO43592 962 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 DGKIO75912 1065 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 CYP3A5P20815 502 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 AKAP5P24588 427 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 KCNJ6P48051 423 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 OSTNP61366 133 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms