RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 ZNF185O15231 689 aa7.08□□□□□ -1.28
PDE4D-221ENST00000514231 NCR1O76036 304 aa7.08□□□□□ -1.28
PDE4D-221ENST00000514231 SPATA31D3P0C874 917 aa7.08□□□□□ -1.28
PDE4D-221ENST00000514231 AGXTP21549 392 aa7.08□□□□□ -1.28
PDE4D-221ENST00000514231 GUCY1A2P33402 732 aa7.08□□□□□ -1.28
PDE4D-221ENST00000514231 TAP1Q03518 808 aa7.08□□□□□ -1.28
PDE4D-221ENST00000514231 MGAT2Q10469 447 aa7.08□□□□□ -1.28
PDE4D-221ENST00000514231 RNF187Q5TA31 235 aaPredicted RBP7.08□□□□□ -1.28
PDE4D-221ENST00000514231 SPATA31D4Q6ZUB0 917 aa7.08□□□□□ -1.28
PDE4D-221ENST00000514231 CNTD1Q8N815 330 aa7.08□□□□□ -1.28
PDE4D-221ENST00000514231 LANCL2Q9NS86 450 aa7.08□□□□□ -1.28
PDE4D-221ENST00000514231 CENPVL1A0A0U1RR11 272 aa7.07□□□□□ -1.28
PDE4D-221ENST00000514231 WNT10BO00744 389 aa7.07□□□□□ -1.28
PDE4D-221ENST00000514231 OSMP13725 252 aa7.07□□□□□ -1.28
PDE4D-221ENST00000514231 BEAN1Q3B7T3 259 aa7.07□□□□□ -1.28
PDE4D-221ENST00000514231 INAVAQ3KP66 663 aa7.07□□□□□ -1.28
PDE4D-221ENST00000514231 PDCD4Q53EL6 469 aaKnown RBP7.07□□□□□ -1.28
PDE4D-221ENST00000514231 AFMIDQ63HM1 303 aa7.07□□□□□ -1.28
PDE4D-221ENST00000514231 OTUD7BQ6GQQ9 843 aa7.07□□□□□ -1.28
PDE4D-221ENST00000514231 VRK3Q8IV63 474 aa7.07□□□□□ -1.28
PDE4D-221ENST00000514231 ARHGEF19Q8IW93 802 aa7.07□□□□□ -1.28
PDE4D-221ENST00000514231 AMOTL1Q8IY63 956 aa7.07□□□□□ -1.28
PDE4D-221ENST00000514231 CASKIN2Q8WXE0 1202 aa7.07□□□□□ -1.28
PDE4D-221ENST00000514231 MRI1Q9BV20 369 aa7.07□□□□□ -1.28
PDE4D-221ENST00000514231 KRTAP9-8Q9BYQ0 159 aa7.07□□□□□ -1.28
PDE4D-221ENST00000514231 C11orf21Q9P2W6 132 aa7.07□□□□□ -1.28
PDE4D-221ENST00000514231 SIK3Q9Y2K2 1263 aa7.07□□□□□ -1.28
PDE4D-221ENST00000514231 FAM171A2A8MVW0 826 aa7.06□□□□□ -1.28
PDE4D-221ENST00000514231 RHOBTB3O94955 611 aa7.06□□□□□ -1.28
PDE4D-221ENST00000514231 NDUFA10O95299 355 aa7.06□□□□□ -1.28
PDE4D-221ENST00000514231 GCP02774 474 aa7.06□□□□□ -1.28
PDE4D-221ENST00000514231 HLA-DOAP06340 250 aa7.06□□□□□ -1.28
PDE4D-221ENST00000514231 CHN2P52757 468 aa7.06□□□□□ -1.28
PDE4D-221ENST00000514231 SEPT2Q15019 361 aa7.06□□□□□ -1.28
PDE4D-221ENST00000514231 CRB2Q5IJ48 1285 aa7.06□□□□□ -1.28
PDE4D-221ENST00000514231 AGAP9Q5VTM2 703 aa7.06□□□□□ -1.28
PDE4D-221ENST00000514231 DRC7Q8IY82 874 aa7.06□□□□□ -1.28
PDE4D-221ENST00000514231 STON2Q8WXE9 905 aa7.06□□□□□ -1.28
PDE4D-221ENST00000514231 TEX101Q9BY14 249 aa7.06□□□□□ -1.28
PDE4D-221ENST00000514231 SENP6Q9GZR1 1112 aaPredicted RBP7.06□□□□□ -1.28
PDE4D-221ENST00000514231 TMEM140Q9NV12 185 aa7.06□□□□□ -1.28
PDE4D-221ENST00000514231 ATP11BQ9Y2G3 1177 aa7.06□□□□□ -1.28
PDE4D-221ENST00000514231 USP15Q9Y4E8 981 aaPredicted RBP7.06□□□□□ -1.28
PDE4D-221ENST00000514231 TEX33O43247 280 aa7.05□□□□□ -1.28
PDE4D-221ENST00000514231 B3GALT2O43825 422 aa7.05□□□□□ -1.28
PDE4D-221ENST00000514231 POMCP01189 267 aa7.05□□□□□ -1.28
PDE4D-221ENST00000514231 WASP42768 502 aa7.05□□□□□ -1.28
PDE4D-221ENST00000514231 SLC6A9P48067 706 aa7.05□□□□□ -1.28
PDE4D-221ENST00000514231 INHBEP58166 350 aa7.05□□□□□ -1.28
PDE4D-221ENST00000514231 UBXN2BQ14CS0 331 aa7.05□□□□□ -1.28
PDE4D-221ENST00000514231 SMN1Q16637 294 aaKnown RBP7.05□□□□□ -1.28
PDE4D-221ENST00000514231 RHOT2Q8IXI1 618 aa7.05□□□□□ -1.28
PDE4D-221ENST00000514231 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.05□□□□□ -1.28
PDE4D-221ENST00000514231 FBXO18Q8NFZ0 1043 aa7.05□□□□□ -1.28
PDE4D-221ENST00000514231 SLC2A13Q96QE2 648 aa7.05□□□□□ -1.28
PDE4D-221ENST00000514231 AGAP2Q99490 1192 aa7.05□□□□□ -1.28
PDE4D-221ENST00000514231 PACSIN3Q9UKS6 424 aa7.05□□□□□ -1.28
PDE4D-221ENST00000514231 DNM3Q9UQ16 869 aa7.05□□□□□ -1.28
PDE4D-221ENST00000514231 FPGT-TNNI3KV9GXZ4 949 aa7.05□□□□□ -1.28
PDE4D-221ENST00000514231 LPXNO60711 386 aa7.04□□□□□ -1.28
PDE4D-221ENST00000514231 ATP5JP18859 108 aa7.04□□□□□ -1.28
PDE4D-221ENST00000514231 ARMC6Q6NXE6 501 aa7.04□□□□□ -1.28
PDE4D-221ENST00000514231 MED25Q71SY5 747 aa7.04□□□□□ -1.28
PDE4D-221ENST00000514231 CBARPQ8N350 705 aaPredicted RBP7.04□□□□□ -1.28
PDE4D-221ENST00000514231 CPEB3Q8NE35 698 aaKnown RBP7.04□□□□□ -1.28
PDE4D-221ENST00000514231 NEU1Q99519 415 aa7.04□□□□□ -1.28
PDE4D-221ENST00000514231 SERHL2Q9H4I8 314 aa7.04□□□□□ -1.28
PDE4D-221ENST00000514231 MANSC1Q9H8J5 431 aa7.04□□□□□ -1.28
PDE4D-221ENST00000514231 AJAP1Q9UKB5 411 aaPredicted RBP7.04□□□□□ -1.28
PDE4D-221ENST00000514231 RAP2AP10114 183 aa7.03□□□□□ -1.28
PDE4D-221ENST00000514231 ZEB1P37275 1124 aaPredicted RBP7.03□□□□□ -1.28
PDE4D-221ENST00000514231 RAP2BP61225 183 aa7.03□□□□□ -1.28
PDE4D-221ENST00000514231 PGM2L1Q6PCE3 622 aa7.03□□□□□ -1.28
PDE4D-221ENST00000514231 C1orf162Q8NEQ5 155 aaPredicted RBP7.03□□□□□ -1.28
PDE4D-221ENST00000514231 OR2I1PQ8NGU4 316 aa7.03□□□□□ -1.28
PDE4D-221ENST00000514231 REXO4Q9GZR2 422 aaKnown RBP7.03□□□□□ -1.28
PDE4D-221ENST00000514231 LDAHQ9H6V9 325 aa7.03□□□□□ -1.28
PDE4D-221ENST00000514231 CYP4F11Q9HBI6 524 aa7.03□□□□□ -1.28
PDE4D-221ENST00000514231 GRID2IPA4D2P6 1211 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 MARCH11A6NNE9 402 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 CFIP05156 583 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 PROZP22891 400 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 ALDH1A3P47895 512 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 COL10A1Q03692 680 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 FSTL1Q12841 308 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 TSHZ3Q63HK5 1081 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 SEM1Q6ZVN7 128 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 FAXDC2Q96IV6 333 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 PHACTR3Q96KR7 559 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 C7orf25Q9BPX7 421 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 WDR11Q9BZH6 1224 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 TOR3AQ9H497 397 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 KLHL11Q9NVR0 708 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 ANKFY1Q9P2R3 1169 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 SLC23A1Q9UHI7 598 aa7.02□□□□□ -1.29
PDE4D-221ENST00000514231 CDK11BP21127 795 aaKnown RBP7.01□□□□□ -1.29
PDE4D-221ENST00000514231 FPR1P21462 350 aa7.01□□□□□ -1.29
PDE4D-221ENST00000514231 DDX6P26196 483 aaKnown RBP eCLIP7.01□□□□□ -1.29
PDE4D-221ENST00000514231 PCSK1P29120 753 aa7.01□□□□□ -1.29
PDE4D-221ENST00000514231 MXRA7P84157 204 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms