RNA–Protein interactions for RNA: ENST00000513801.5

ATP2C1-221, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,439 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-221ENST00000513801 TSPY2A6NKD2 308 aa13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 VILLO15195 856 aa13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 CLDN3O15551 220 aa13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 SORBS2O94875 1100 aaKnown RBP13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 CHRNA3P32297 505 aa13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 GRAMD1AQ96CP6 724 aa13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 JAG2Q9Y219 1238 aa13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 VIL1P09327 827 aaKnown RBP13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 TFPTP0C1Z6 253 aa13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 NCOA4Q13772 614 aa13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 ZNF568Q3ZCX4 644 aa13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 TMEM110Q86TL2 294 aa13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 LRRC6Q86X45 466 aa13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 TRIM50Q86XT4 487 aa13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 RFFLQ8WZ73 363 aa13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 DNAJC19Q96DA6 116 aa13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 NR1H4Q96RI1 486 aaPredicted RBP13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 BRD8Q9H0E9 1235 aa13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 CHST7Q9NS84 486 aa13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 PAIP2BQ9ULR5 123 aaKnown RBP13.25□□□□□ -0.29
ATP2C1-221ENST00000513801 TRAFD1O14545 582 aaPredicted RBP13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 CYP26A1O43174 497 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 DDAH1O94760 285 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 HAUS5O94927 633 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 UQCRFS1P1P0C7P4 283 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 CCDC166P0CW27 439 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 KRT15P19012 456 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 COMTP21964 271 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 PSMD7P51665 324 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 RASA3Q14644 834 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 SLC44A4Q53GD3 710 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 ZNF554Q86TJ5 538 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 RASSF3Q86WH2 238 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 TREML1Q86YW5 311 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 RAD54LQ92698 747 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 PTCD3Q96EY7 689 aaKnown RBP13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 RUNDC3BQ96NL0 473 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 OXCT2Q9BYC2 517 aaPredicted RBP13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 METTL14Q9HCE5 456 aaKnown RBP13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 SIX2Q9NPC8 291 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 GCNT4Q9P109 453 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 PVALEFA0A1B0GWK0 134 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 USP17L3A6NCW0 530 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 USP17L4A6NCW7 530 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 H3BRJ5 948 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 PABPC4LP0CB38 370 aaKnown RBP13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 POTEJP0CG39 1038 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 CALM1P0DP23 149 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 CALM2P0DP24 149 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 CALM3P0DP25 149 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 KCNA1Q09470 495 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 ZRSR2Q15696 482 aaKnown RBP13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 C10orf76Q5T2E6 689 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 DAB2IPQ5VWQ8 1189 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 NSMFQ6X4W1 530 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 RIPOR1Q6ZS17 1223 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 TRMT10CQ7L0Y3 403 aaKnown RBP13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 USP17L1Q7RTZ2 530 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 SLC15A3Q8IY34 581 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 EFCAB3Q8N7B9 438 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 SLC20A1Q8WUM9 679 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 PANX3Q96QZ0 392 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 ISCA1Q9BUE6 129 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 PCDHB13Q9Y5F0 798 aa13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 BAZ2AQ9UIF9 1905 aaKnown RBP13.24□□□□□ -0.29
ATP2C1-221ENST00000513801 KAT6BQ8WYB5 2073 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 PODXLO00592 558 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 COL6A2P12110 1019 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 PPP1R2P41236 205 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 CD151P48509 253 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 NAPAP54920 295 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 AQP4P55087 323 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 COG7P83436 770 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 KLHL35Q6PF15 583 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 PPP1R21Q6ZMI0 780 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 IFNL2Q8IZJ0 200 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 C7orf43Q8WVR3 580 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 ZNF75CPQ92670 426 aaPredicted RBP13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 RIC8AQ9NPQ8 531 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 PCYOX1Q9UHG3 505 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 NENFQ9UMX5 172 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 ABCB11O95342 1321 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 FOXD2O60548 495 aaPredicted RBP13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 ESRRAP11474 423 aaPredicted RBP13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 ADRA1DP25100 572 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 EMP3P54852 163 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 KDSRQ06136 332 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 SYDE2Q5VT97 1194 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 LVRNQ6Q4G3 990 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 VPS36Q86VN1 386 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 THTPAQ9BU02 230 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 TRABDQ9H4I3 376 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 DNAJC18Q9H819 358 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 PRDM16Q9HAZ2 1276 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 USP29Q9HBJ7 922 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 DDX43Q9NXZ2 648 aaKnown RBP13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 SPATA7Q9P0W8 599 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 LARSQ9P2J5 1176 aaKnown RBP13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 ZNF212Q9UDV6 495 aa13.23□□□□□ -0.29
ATP2C1-221ENST00000513801 SH3GLB1Q9Y371 365 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms