RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 SUGT1Q9Y2Z0 365 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 PCDHAC2Q9Y5I4 1007 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 MAPK8IP3Q9UPT6 1336 aa4.63□□□□□ -1.67
PDLIM5-218ENST00000513341 DOCK3Q8IZD9 2030 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 TCP10L2B9ZVM9 353 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 MAFKO60675 156 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 KCNH1O95259 989 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 CSF1RP07333 972 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 CR2P20023 1033 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 BCL6P41182 706 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 ZNF143P52747 638 aaPredicted RBP4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 KRTAP10-11P60412 298 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 CHRNDQ07001 517 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 DUSP8Q13202 625 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 KCNAB2Q13303 367 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 USP10Q14694 798 aaKnown RBP4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 ZNF568Q3ZCX4 644 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 TMC5Q6UXY8 1006 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 DIS3LQ8TF46 1054 aaKnown RBP4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 SNX27Q96L92 541 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 MYD88Q99836 296 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 PLA2G12BQ9BX93 195 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 NKX2-4Q9H2Z4 354 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 KCND1Q9NSA2 647 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 GJD2Q9UKL4 321 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 PPT2Q9UMR5 302 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 OAZ3Q9UMX2 235 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 MYH3P11055 1940 aa4.62□□□□□ -1.67
PDLIM5-218ENST00000513341 ARAP2Q8WZ64 1704 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 RAMP2O60895 175 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 ADRA1BP35368 520 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 ZNF76P36508 570 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 GCLCP48506 637 aaPredicted RBP4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 MRPS5P82675 430 aaKnown RBP4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 CYP4F3Q08477 520 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 NEXNQ0ZGT2 675 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 FAM110CQ1W6H9 321 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 MFSD14BQ5SR56 506 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 MAP3K21Q5TCX8 1036 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 VASNQ6EMK4 673 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 Q6ZPA2 131 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 ZNF627Q7L945 461 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 TRIM59Q8IWR1 403 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 TRIM48Q8IWZ4 208 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 BVESQ8NE79 360 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 OR6P1Q8NGX9 317 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 TDRD7Q8NHU6 1098 aaKnown RBP4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 TBC1D22AQ8WUA7 517 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 FAM151AQ8WW52 585 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 DIO2Q92813 273 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 ASB2Q96Q27 587 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 TTYH1Q9H313 450 aaPredicted RBP4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 TMOD2Q9NZR1 351 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 MYOTQ9UBF9 498 aa4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 RPAP1Q9BWH6 1393 aaPredicted RBP4.61□□□□□ -1.67
PDLIM5-218ENST00000513341 DDX60LQ5H9U9 1706 aaKnown RBP4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 A0A1W2PQH9 124 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 ANKRD18BA2A2Z9 1011 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 KRT4P19013 534 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 KLRK1P26718 216 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 RPS19P39019 145 aaKnown RBP4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 TMPOP42166 694 aaKnown RBP4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 IL12RB1P42701 662 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 PABPC4Q13310 644 aaKnown RBP eCLIP4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 UBE4AQ14139 1066 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 SHHQ15465 462 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 AKNAD1Q5T1N1 836 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 ACBD5Q5T8D3 534 aaPredicted RBP4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 FBXW10Q5XX13 1052 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 GTF2IRD2BQ6EKJ0 949 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 KSR2Q6VAB6 950 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 GTF2IRD2Q86UP8 949 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 CCDC103Q8IW40 242 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 SMCR8Q8TEV9 937 aaPredicted RBP4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 TEKT1Q969V4 418 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 EPB41L1Q9H4G0 881 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 ASH2LQ9UBL3 628 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 AFG3L2Q9Y4W6 797 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 PFASO15067 1338 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 AOX1Q06278 1338 aa4.6□□□□□ -1.67
PDLIM5-218ENST00000513341 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 KRTAP29-1A8MX34 341 aaPredicted RBP4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 ARNTLO00327 626 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 MAST3O60307 1309 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 MSCO60682 206 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 CUTAO60888 179 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 TAF5LO75529 589 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 DGKIO75912 1065 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 SCG5P05408 212 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 IGKV5-2P06315 115 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 NAT2P11245 290 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 TCF3P15923 654 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 HIBADHP31937 336 aaKnown RBP4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 FANCCQ00597 558 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 CNGB1Q14028 1251 aaPredicted RBP4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 LRRC26Q2I0M4 334 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 KRT24Q2M2I5 525 aa4.59□□□□□ -1.67
PDLIM5-218ENST00000513341 AAK1Q2M2I8 961 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms