RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 LY6KQ17RY6 165 aa12.74□□□□□ -0.37
PRDM16-207ENST00000512462 Q4G0T1 1027 aa12.74□□□□□ -0.37
PRDM16-207ENST00000512462 KCNT1Q5JUK3 1230 aa12.74□□□□□ -0.37
PRDM16-207ENST00000512462 GKAP1Q5VSY0 366 aaPredicted RBP12.74□□□□□ -0.37
PRDM16-207ENST00000512462 SAYSD1Q9NPB0 183 aa12.74□□□□□ -0.37
PRDM16-207ENST00000512462 LCMT1Q9UIC8 334 aa12.74□□□□□ -0.37
PRDM16-207ENST00000512462 MRPL42Q9Y6G3 142 aaKnown RBP12.74□□□□□ -0.37
PRDM16-207ENST00000512462 FAM169AQ9Y6X4 670 aa12.74□□□□□ -0.37
PRDM16-207ENST00000512462 TIAM2Q8IVF5 1701 aa12.74□□□□□ -0.37
PRDM16-207ENST00000512462 PHF20L1A8MW92 1017 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 GOLGA8RI6L899 631 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 M0R2N6 131 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 TGFB1I1O43294 461 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 SNHG28P0DPA3 235 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 BACE1P56817 501 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 PGM5Q15124 567 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 NUGGCQ68CJ6 796 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 C15orf52Q6ZUT6 534 aaKnown RBP12.73□□□□□ -0.37
PRDM16-207ENST00000512462 C1orf186Q6ZWK4 172 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 CCDC91Q7Z6B0 441 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 NME8Q8N427 588 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 RBM46Q8TBY0 533 aaKnown RBP12.73□□□□□ -0.37
PRDM16-207ENST00000512462 CALR3Q96L12 384 aaKnown RBP12.73□□□□□ -0.37
PRDM16-207ENST00000512462 RPF1Q9H9Y2 349 aaKnown RBP12.73□□□□□ -0.37
PRDM16-207ENST00000512462 CHD4Q14839 1912 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 ADM5C9JUS6 153 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 DGAT1O75907 488 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 PIAS1O75925 651 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 RRM1P23921 792 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 IREB2P48200 963 aaKnown RBP12.73□□□□□ -0.37
PRDM16-207ENST00000512462 KRT17Q04695 432 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 CCDC6Q16204 474 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 FIGNQ5HY92 759 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 GLRA4Q5JXX5 417 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 PHLDB3Q6NSJ2 640 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 TAOK1Q7L7X3 1001 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 ANKMY2Q8IV38 441 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 FBXO16Q8IX29 292 aaPredicted RBP12.73□□□□□ -0.37
PRDM16-207ENST00000512462 GIMAP7Q8NHV1 300 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 FBXO25Q8TCJ0 367 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 CYFIP2Q96F07 1278 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 WNK4Q96J92 1243 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 SH3BP1Q9Y3L3 701 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 PPFIA4O75335 1185 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 SPAG7O75391 227 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 PSMD10O75832 226 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 BPIFB4P59827 614 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 NCOA4Q13772 614 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 ZNF667Q5HYK9 610 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 ALS2CLQ60I27 953 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 OR6B3Q8NGW1 331 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 MED10Q9BTT4 135 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 KCTD10Q9H3F6 313 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 CXorf56Q9H5V9 222 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 AGO4Q9HCK5 861 aaKnown RBP12.73□□□□□ -0.37
PRDM16-207ENST00000512462 TXNDC16Q9P2K2 825 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 WRAP73Q9P2S5 460 aaPredicted RBP12.73□□□□□ -0.37
PRDM16-207ENST00000512462 MYH6P13533 1939 aa12.73□□□□□ -0.37
PRDM16-207ENST00000512462 RGL2O15211 777 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 SLC16A3O15427 465 aaKnown RBP12.72□□□□□ -0.37
PRDM16-207ENST00000512462 ITGB3BPQ13352 177 aaPredicted RBP12.72□□□□□ -0.37
PRDM16-207ENST00000512462 KYNUQ16719 465 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 PRUNE1Q86TP1 453 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 KCTD6Q8NC69 237 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 MCEEQ96PE7 176 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 KLF6Q99612 283 aaPredicted RBP12.72□□□□□ -0.37
PRDM16-207ENST00000512462 MTMR12Q9C0I1 747 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 PXMP2Q9NR77 195 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 HESX1Q9UBX0 185 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 TCF7P36402 384 aaPredicted RBP12.72□□□□□ -0.37
PRDM16-207ENST00000512462 PMS2P54278 862 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 BIRC2Q13490 618 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 JAMLQ86YT9 394 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 MKL1Q969V6 931 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 GINM1Q9NU53 330 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.72□□□□□ -0.37
PRDM16-207ENST00000512462 EXOC1LA0A1B0GW35 172 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 MAN1A1P33908 653 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 NOP14P78316 857 aaKnown RBP12.72□□□□□ -0.37
PRDM16-207ENST00000512462 XKR3Q5GH77 459 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 CATSPER4Q7RTX7 472 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 CCDC60Q8IWA6 550 aaPredicted RBP12.72□□□□□ -0.37
PRDM16-207ENST00000512462 RBBP8NLQ8NC74 664 aaPredicted RBP12.72□□□□□ -0.37
PRDM16-207ENST00000512462 AGBL3Q8NEM8 1001 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 C10orf88Q9H8K7 445 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 FAM49BQ9NUQ9 324 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 AJAP1Q9UKB5 411 aaPredicted RBP12.72□□□□□ -0.37
PRDM16-207ENST00000512462 MYO9BQ13459 2157 aa12.72□□□□□ -0.37
PRDM16-207ENST00000512462 SYNGAP1Q96PV0 1343 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 EIF4E1BA6NMX2 242 aaKnown RBP12.71□□□□□ -0.37
PRDM16-207ENST00000512462 VWA5AO00534 786 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 NOL4O94818 638 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 VIL1P09327 827 aaKnown RBP12.71□□□□□ -0.37
PRDM16-207ENST00000512462 IRAK1P51617 712 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 PSMC1P62191 440 aaKnown RBP12.71□□□□□ -0.37
PRDM16-207ENST00000512462 ERVK-9P63128 1117 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 GPS1Q13098 491 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 SLC29A2Q14542 456 aa12.71□□□□□ -0.37
PRDM16-207ENST00000512462 HADHQ16836 314 aaKnown RBP12.71□□□□□ -0.37
PRDM16-207ENST00000512462 SIAH1Q8IUQ4 282 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms