RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 ELOA2Q8IYF1 753 aaPredicted RBP8.14□□□□□ -1.11
NR1I3-231ENST00000512340 MICALL1Q8N3F8 863 aa8.14□□□□□ -1.11
NR1I3-231ENST00000512340 KLHL23Q8NBE8 558 aa8.14□□□□□ -1.11
NR1I3-231ENST00000512340 SMG8Q8ND04 991 aaKnown RBP8.14□□□□□ -1.11
NR1I3-231ENST00000512340 GDPD5Q8WTR4 605 aa8.14□□□□□ -1.11
NR1I3-231ENST00000512340 CACTINQ8WUQ7 758 aaKnown RBP8.14□□□□□ -1.11
NR1I3-231ENST00000512340 STAMQ92783 540 aa8.14□□□□□ -1.11
NR1I3-231ENST00000512340 SMARCE1Q969G3 411 aa8.14□□□□□ -1.11
NR1I3-231ENST00000512340 GSDMAQ96QA5 445 aa8.14□□□□□ -1.11
NR1I3-231ENST00000512340 NSUN3Q9H649 340 aaKnown RBP8.14□□□□□ -1.11
NR1I3-231ENST00000512340 ENTPD7Q9NQZ7 604 aa8.14□□□□□ -1.11
NR1I3-231ENST00000512340 TLR9Q9NR96 1032 aa8.14□□□□□ -1.11
NR1I3-231ENST00000512340 SNTG2Q9NY99 539 aa8.14□□□□□ -1.11
NR1I3-231ENST00000512340 TBC1D7Q9P0N9 293 aa8.14□□□□□ -1.11
NR1I3-231ENST00000512340 DPP7Q9UHL4 492 aa8.14□□□□□ -1.11
NR1I3-231ENST00000512340 AGO2Q9UKV8 859 aaKnown RBP8.14□□□□□ -1.11
NR1I3-231ENST00000512340 PLAGL2Q9UPG8 496 aa8.14□□□□□ -1.11
NR1I3-231ENST00000512340 HES2Q9Y543 173 aa8.14□□□□□ -1.11
NR1I3-231ENST00000512340 PIEZO1Q92508 2521 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 RALGAPA2Q2PPJ7 1873 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 A0A0B4J269 797 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 RPN1P04843 607 aaKnown RBP8.13□□□□□ -1.11
NR1I3-231ENST00000512340 PROZP22891 400 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 RPL13P26373 211 aaKnown RBP8.13□□□□□ -1.11
NR1I3-231ENST00000512340 RPL9P32969 192 aaKnown RBP8.13□□□□□ -1.11
NR1I3-231ENST00000512340 GATMP50440 423 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 SCNN1GP51170 649 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 OSTNP61366 133 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 SMC1AQ14683 1233 aaKnown RBP8.13□□□□□ -1.11
NR1I3-231ENST00000512340 ZC2HC1CQ53FD0 456 aaPredicted RBP8.13□□□□□ -1.11
NR1I3-231ENST00000512340 EEF1DP3Q658K8 133 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 DDX53Q86TM3 631 aaKnown RBP8.13□□□□□ -1.11
NR1I3-231ENST00000512340 PPFIBP1Q86W92 1011 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 NT5DC4Q86YG4 428 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 BEST2Q8NFU1 509 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 NOC3LQ8WTT2 800 aaKnown RBP8.13□□□□□ -1.11
NR1I3-231ENST00000512340 POF1BQ8WVV4 589 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 FAM212AQ96EL1 285 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 ASB2Q96Q27 587 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 CDCA3Q99618 268 aaPredicted RBP8.13□□□□□ -1.11
NR1I3-231ENST00000512340 TSG101Q99816 390 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 EMILIN2Q9BXX0 1053 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 BLZF1Q9H2G9 400 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 ASB7Q9H672 318 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 CWH43Q9H720 699 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 NRDE2Q9H7Z3 1164 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 PTPRHQ9HD43 1115 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 KLK14Q9P0G3 267 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 COG5Q9UP83 839 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 FAM50BQ9Y247 325 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 DERAQ9Y315 318 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 NUB1Q9Y5A7 615 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 GBF1Q92538 1859 aa8.13□□□□□ -1.11
NR1I3-231ENST00000512340 SF3B1O75533 1304 aaKnown RBP eCLIP8.12□□□□□ -1.11
NR1I3-231ENST00000512340 ZNF233A6NK53 670 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 SPDYE4A6NLX3 237 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 CALUO43852 315 aaPredicted RBP8.12□□□□□ -1.11
NR1I3-231ENST00000512340 PRPF40AO75400 957 aaKnown RBP8.12□□□□□ -1.11
NR1I3-231ENST00000512340 RHOBTB3O94955 611 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 ITGB1P05556 798 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 URODP06132 367 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 GALTP07902 379 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 MYBP10242 640 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 KCNE1P15382 129 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 PTMSP20962 102 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 CUL4BQ13620 913 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 KCNB1Q14721 858 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 KNOP1Q1ED39 458 aaKnown RBP8.12□□□□□ -1.11
NR1I3-231ENST00000512340 DCLRE1AQ6PJP8 1040 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 TAS1R3Q7RTX0 852 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 FMR1NBQ8N0W7 255 aaPredicted RBP8.12□□□□□ -1.11
NR1I3-231ENST00000512340 SLC39A11Q8N1S5 342 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 ZNF507Q8TCN5 953 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 SPPL3Q8TCT6 385 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 KIF12Q96FN5 646 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 IGSF21Q96ID5 467 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 SNX27Q96L92 541 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 ZFP42Q96MM3 310 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 RNF39Q9H2S5 420 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 SLC39A2Q9NP94 309 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.12□□□□□ -1.11
NR1I3-231ENST00000512340 MRPL17Q9NRX2 175 aaKnown RBP8.12□□□□□ -1.11
NR1I3-231ENST00000512340 RNF19AQ9NV58 838 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 CNTN3Q9P232 1028 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 UBQLN1Q9UMX0 589 aaKnown RBP8.12□□□□□ -1.11
NR1I3-231ENST00000512340 FRMD4BQ9Y2L6 1034 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 MTCH2Q9Y6C9 303 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 STYXL1Q9Y6J8 313 aa8.12□□□□□ -1.11
NR1I3-231ENST00000512340 PRRC2BQ5JSZ5 2229 aaKnown RBP8.12□□□□□ -1.11
NR1I3-231ENST00000512340 FNDC1Q4ZHG4 1894 aaPredicted RBP8.11□□□□□ -1.11
NR1I3-231ENST00000512340 SMIM28A0A1B0GU29 152 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 NRP1O14786 923 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 GRM6O15303 877 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 EXTL3O43909 919 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 PPP1R37O75864 691 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 B3GAT3O94766 335 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 PRPF6O94906 941 aaKnown RBP8.11□□□□□ -1.11
NR1I3-231ENST00000512340 CXCL14O95715 111 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 TNNC2P02585 160 aa8.11□□□□□ -1.11
NR1I3-231ENST00000512340 CYP3A5P20815 502 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms