RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 NID2Q14112 1375 aa13.57□□□□□ -0.24
DDR1-267ENST00000512336 DKC1O60832 514 aaKnown RBP eCLIP13.56□□□□□ -0.24
DDR1-267ENST00000512336 P4HBP07237 508 aaKnown RBP13.56□□□□□ -0.24
DDR1-267ENST00000512336 CEBPBP17676 345 aa13.56□□□□□ -0.24
DDR1-267ENST00000512336 NLRP5P59047 1200 aa13.56□□□□□ -0.24
DDR1-267ENST00000512336 MBTD1Q05BQ5 628 aa13.56□□□□□ -0.24
DDR1-267ENST00000512336 DMWDQ09019 674 aa13.56□□□□□ -0.24
DDR1-267ENST00000512336 TUSC3Q13454 348 aa13.56□□□□□ -0.24
DDR1-267ENST00000512336 SIM2Q14190 667 aaPredicted RBP13.56□□□□□ -0.24
DDR1-267ENST00000512336 GRM2Q14416 872 aa13.56□□□□□ -0.24
DDR1-267ENST00000512336 PPP2R5DQ14738 602 aa13.56□□□□□ -0.24
DDR1-267ENST00000512336 CSRP2Q16527 193 aa13.56□□□□□ -0.24
DDR1-267ENST00000512336 SLC5A9Q2M3M2 681 aa13.56□□□□□ -0.24
DDR1-267ENST00000512336 DNASE1L2Q92874 299 aa13.56□□□□□ -0.24
DDR1-267ENST00000512336 MTRQ99707 1265 aa13.56□□□□□ -0.24
DDR1-267ENST00000512336 RNF26Q9BY78 433 aaPredicted RBP13.56□□□□□ -0.24
DDR1-267ENST00000512336 DDX25Q9UHL0 483 aaKnown RBP13.56□□□□□ -0.24
DDR1-267ENST00000512336 FAM208BQ5VWN6 2430 aa13.56□□□□□ -0.24
DDR1-267ENST00000512336 NOTCH4Q99466 2003 aa13.56□□□□□ -0.24
DDR1-267ENST00000512336 MAN2B1O00754 1011 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 ZBTB39O15060 712 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 B4GALT5O43286 388 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 SLC37A4O43826 429 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 RHOP08100 348 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 PMLP29590 882 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 YWHABP31946 246 aaKnown RBP13.55□□□□□ -0.24
DDR1-267ENST00000512336 OR1D2P34982 312 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 CCR3P51677 355 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 SATB1Q01826 763 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 SRSF5Q13243 272 aaKnown RBP13.55□□□□□ -0.24
DDR1-267ENST00000512336 PPP2R5CQ13362 524 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 COL9A2Q14055 689 aaPredicted RBP13.55□□□□□ -0.24
DDR1-267ENST00000512336 RAB33AQ14088 237 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 NTRK3Q16288 839 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 XKR9Q5GH70 373 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 N4BP2L1Q5TBK1 243 aaPredicted RBP13.55□□□□□ -0.24
DDR1-267ENST00000512336 MAMSTRQ6ZN01 415 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 Q6ZUG5 572 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 IFNLR1Q8IU57 520 aaPredicted RBP13.55□□□□□ -0.24
DDR1-267ENST00000512336 BRF1Q92994 677 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 ELSPBP1Q96BH3 223 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 LXNQ9BS40 222 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 C22orf23Q9BZE7 217 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 SLKQ9H2G2 1235 aaPredicted RBP13.55□□□□□ -0.24
DDR1-267ENST00000512336 BRD9Q9H8M2 597 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 LMAN1LQ9HAT1 526 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 XPNPEP1Q9NQW7 623 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 GDE1Q9NZC3 331 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 ZMYM2Q9UBW7 1377 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 LAMA1P25391 3075 aa13.55□□□□□ -0.24
DDR1-267ENST00000512336 ANKRD11Q6UB99 2663 aaPredicted RBP13.55□□□□□ -0.24
DDR1-267ENST00000512336 CHURC1-FNTBB4DL54 471 aa13.54□□□□□ -0.24
DDR1-267ENST00000512336 HRO43593 1189 aa13.54□□□□□ -0.24
DDR1-267ENST00000512336 FCARP24071 287 aa13.54□□□□□ -0.24
DDR1-267ENST00000512336 FNTBP49356 437 aa13.54□□□□□ -0.24
DDR1-267ENST00000512336 CAPSQ13938 189 aa13.54□□□□□ -0.24
DDR1-267ENST00000512336 MXD4Q14582 209 aaPredicted RBP13.54□□□□□ -0.24
DDR1-267ENST00000512336 UVSSAQ2YD98 709 aa13.54□□□□□ -0.24
DDR1-267ENST00000512336 TSGA10IPQ3SY00 556 aa13.54□□□□□ -0.24
DDR1-267ENST00000512336 SLC27A1Q6PCB7 646 aa13.54□□□□□ -0.24
DDR1-267ENST00000512336 MOXD1Q6UVY6 613 aa13.54□□□□□ -0.24
DDR1-267ENST00000512336 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.54□□□□□ -0.24
DDR1-267ENST00000512336 C4orf19Q8IY42 314 aa13.54□□□□□ -0.24
DDR1-267ENST00000512336 ASAP3Q8TDY4 903 aa13.54□□□□□ -0.24
DDR1-267ENST00000512336 DDX1Q92499 740 aaKnown RBP13.54□□□□□ -0.24
DDR1-267ENST00000512336 IER2Q9BTL4 223 aa13.54□□□□□ -0.24
DDR1-267ENST00000512336 RGL1Q9NZL6 768 aa13.54□□□□□ -0.24
DDR1-267ENST00000512336 PCDHA4Q9UN74 947 aa13.54□□□□□ -0.24
DDR1-267ENST00000512336 M0R2N6 131 aa13.53□□□□□ -0.24
DDR1-267ENST00000512336 NRG2O14511 850 aaPredicted RBP13.53□□□□□ -0.24
DDR1-267ENST00000512336 PTGESO14684 152 aa13.53□□□□□ -0.24
DDR1-267ENST00000512336 CXCL12P48061 93 aa13.53□□□□□ -0.24
DDR1-267ENST00000512336 ELAVL2Q12926 359 aaKnown RBP13.53□□□□□ -0.24
DDR1-267ENST00000512336 TFDP1Q14186 410 aa13.53□□□□□ -0.24
DDR1-267ENST00000512336 GAS6Q14393 721 aa13.53□□□□□ -0.24
DDR1-267ENST00000512336 KRT32Q14532 448 aa13.53□□□□□ -0.24
DDR1-267ENST00000512336 IL31Q6EBC2 164 aa13.53□□□□□ -0.24
DDR1-267ENST00000512336 PDXDC1Q6P996 788 aa13.53□□□□□ -0.24
DDR1-267ENST00000512336 OTUD6AQ7L8S5 288 aa13.53□□□□□ -0.24
DDR1-267ENST00000512336 FAM3CQ92520 227 aa13.53□□□□□ -0.24
DDR1-267ENST00000512336 DYDC2Q96IM9 177 aa13.53□□□□□ -0.24
DDR1-267ENST00000512336 CXCL16Q9H2A7 254 aa13.53□□□□□ -0.24
DDR1-267ENST00000512336 UPF2Q9HAU5 1272 aaKnown RBP13.53□□□□□ -0.24
DDR1-267ENST00000512336 SH3GLB2Q9NR46 395 aa13.53□□□□□ -0.24
DDR1-267ENST00000512336 CDY1Q9Y6F8 540 aa13.53□□□□□ -0.24
DDR1-267ENST00000512336 CNOT1A5YKK6 2376 aaKnown RBP13.53□□□□□ -0.24
DDR1-267ENST00000512336 ZFYVE26Q68DK2 2539 aa13.53□□□□□ -0.24
DDR1-267ENST00000512336 A0A1B0GUA9 196 aa13.52□□□□□ -0.25
DDR1-267ENST00000512336 HMGB1P09429 215 aaKnown RBP13.52□□□□□ -0.25
DDR1-267ENST00000512336 IFNAR1P17181 557 aa13.52□□□□□ -0.25
DDR1-267ENST00000512336 IGFBP6P24592 240 aaPredicted RBP13.52□□□□□ -0.25
DDR1-267ENST00000512336 SHC2P98077 582 aa13.52□□□□□ -0.25
DDR1-267ENST00000512336 CYP4A11Q02928 519 aa13.52□□□□□ -0.25
DDR1-267ENST00000512336 POU5F1BQ06416 359 aa13.52□□□□□ -0.25
DDR1-267ENST00000512336 CTTNQ14247 550 aaKnown RBP13.52□□□□□ -0.25
DDR1-267ENST00000512336 EPHA7Q15375 998 aa13.52□□□□□ -0.25
DDR1-267ENST00000512336 INF2Q27J81 1249 aa13.52□□□□□ -0.25
DDR1-267ENST00000512336 C8orf34Q49A92 452 aa13.52□□□□□ -0.25
DDR1-267ENST00000512336 AASDHQ4L235 1098 aaPredicted RBP13.52□□□□□ -0.25
DDR1-267ENST00000512336 FAM78AQ5JUQ0 283 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms