RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 SPDYE2Q495Y8 402 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 TTI2Q6NXR4 508 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 SLC30A10Q6XR72 485 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 CYFIP1Q7L576 1253 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 EXOC8Q8IYI6 725 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 ANKRD7Q92527 254 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 NLRP4Q96MN2 994 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 MSTO1Q9BUK6 570 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 INTS2Q9H0H0 1204 aaKnown RBP11.48□□□□□ -0.57
CPNE4-209ENST00000512055 GID8Q9NWU2 228 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 NDE1Q9NXR1 346 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 ZNF148Q9UQR1 794 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 AKT3Q9Y243 479 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 GOLGA8SH3BPF8 625 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 WNT7AO00755 349 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 MED24O75448 989 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 SEC24DO94855 1032 aaPredicted RBP11.48□□□□□ -0.57
CPNE4-209ENST00000512055 RPA1P27694 616 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 DEFA1P59665 94 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 DEFA3P59666 94 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 CDKAL1Q5VV42 579 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 HAUS6Q7Z4H7 955 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 FRMD5Q7Z6J6 570 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 LUZP2Q86TE4 346 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 TRIM42Q8IWZ5 723 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 TRIM63Q969Q1 353 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 COG4Q9H9E3 785 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 SEL1LQ9UBV2 794 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 MCM8Q9UJA3 840 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 EMSYQ7Z589 1322 aa11.48□□□□□ -0.57
CPNE4-209ENST00000512055 NFIBO00712 420 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 TOM1L1O75674 476 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 SLC8A3P57103 927 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 DHX9Q08211 1270 aaKnown RBP11.47□□□□□ -0.57
CPNE4-209ENST00000512055 ITGB3BPQ13352 177 aaPredicted RBP11.47□□□□□ -0.57
CPNE4-209ENST00000512055 ZNF394Q53GI3 561 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 SCARA5Q6ZMJ2 495 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 RUNDC3BQ96NL0 473 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 APOL6Q9BWW8 343 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 CNOT10Q9H9A5 744 aaKnown RBP11.47□□□□□ -0.57
CPNE4-209ENST00000512055 SMARCAL1Q9NZC9 954 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 TOPAZ1Q8N9V7 1692 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 MSH4O15457 936 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 STAM2O75886 525 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 ATXN8OSP0DMR3 200 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 S100A5P33763 92 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 ZNF211Q13398 564 aaPredicted RBP11.47□□□□□ -0.57
CPNE4-209ENST00000512055 TSTA3Q13630 321 aaPredicted RBP11.47□□□□□ -0.57
CPNE4-209ENST00000512055 BAATQ14032 418 aaPredicted RBP11.47□□□□□ -0.57
CPNE4-209ENST00000512055 FAM180AQ6UWF9 173 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 UNC45BQ8IWX7 931 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 NKX2-3Q8TAU0 364 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 GIPC2Q8TF65 315 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 TUFT1Q9NNX1 390 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 RSPH10B2B2RC85 870 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 TBX3O15119 743 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 RSPH10BP0C881 870 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 PSMC5P62195 406 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 YWHAEP62258 255 aaKnown RBP11.47□□□□□ -0.57
CPNE4-209ENST00000512055 MDM2Q00987 491 aaPredicted RBP11.47□□□□□ -0.57
CPNE4-209ENST00000512055 AP1B1Q10567 949 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 SLC15A2Q16348 729 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 ADPGKQ9BRR6 497 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 SEMA6BQ9H3T3 888 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 CNOT7Q9UIV1 285 aaKnown RBP11.47□□□□□ -0.57
CPNE4-209ENST00000512055 P4HA1P13674 534 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 EPHB1P54762 984 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 TRIP13Q15645 432 aaPredicted RBP11.47□□□□□ -0.57
CPNE4-209ENST00000512055 STXBP2Q15833 593 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 ATAD3BQ5T9A4 648 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 RAPH1Q70E73 1250 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 SAMD7Q7Z3H4 446 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 DPP9Q86TI2 863 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 MS4A14Q96JA4 679 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 HOXC10Q9NYD6 342 aa11.47□□□□□ -0.57
CPNE4-209ENST00000512055 CAND2O75155 1236 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 HSPA8P11142 646 aaKnown RBP11.46□□□□□ -0.57
CPNE4-209ENST00000512055 CYP11B2P19099 503 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 YWHABP31946 246 aaKnown RBP11.46□□□□□ -0.57
CPNE4-209ENST00000512055 SERPINB4P48594 390 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 SGO2Q562F6 1265 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 THNSL1Q8IYQ7 743 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 NEK9Q8TD19 979 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 NSMCE1Q8WV22 266 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 PASKQ96RG2 1323 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 A0A0G2JND7 137 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 UCHL3P15374 230 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 GARSP41250 739 aaKnown RBP11.46□□□□□ -0.57
CPNE4-209ENST00000512055 INAQ16352 499 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 NT5DC1Q5TFE4 455 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 TMEM154Q6P9G4 183 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 NUDCD1Q96RS6 583 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 ZMYND8Q9ULU4 1186 aaPredicted RBP11.46□□□□□ -0.57
CPNE4-209ENST00000512055 SOX13Q9UN79 622 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 FHOD1Q9Y613 1164 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 DUSP10Q9Y6W6 482 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 VCPP55072 806 aaKnown RBP11.46□□□□□ -0.57
CPNE4-209ENST00000512055 RHBDL3P58872 404 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 AP2B1P63010 937 aa11.46□□□□□ -0.57
CPNE4-209ENST00000512055 CYP4F22Q6NT55 531 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms