RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 FIZ1Q96SL8 496 aa18.07■□□□□ 0.48
DDX41-213ENST00000512027 CCDC94Q9BW85 323 aaPredicted RBP18.07■□□□□ 0.48
DDX41-213ENST00000512027 S1PR5Q9H228 398 aa18.07■□□□□ 0.48
DDX41-213ENST00000512027 PARVGQ9HBI0 331 aa18.07■□□□□ 0.48
DDX41-213ENST00000512027 STK17AQ9UEE5 414 aa18.07■□□□□ 0.48
DDX41-213ENST00000512027 FSD2A1L4K1 749 aa18.06■□□□□ 0.48
DDX41-213ENST00000512027 MYMKA6NI61 221 aa18.06■□□□□ 0.48
DDX41-213ENST00000512027 TRAK2O60296 914 aa18.06■□□□□ 0.48
DDX41-213ENST00000512027 WEE2P0C1S8 567 aa18.06■□□□□ 0.48
DDX41-213ENST00000512027 SRGAP2BP0DMP2 458 aa18.06■□□□□ 0.48
DDX41-213ENST00000512027 MYBP10242 640 aa18.06■□□□□ 0.48
DDX41-213ENST00000512027 SOX4Q06945 474 aaPredicted RBP18.06■□□□□ 0.48
DDX41-213ENST00000512027 NOLC1Q14978 699 aaKnown RBP eCLIP18.06■□□□□ 0.48
DDX41-213ENST00000512027 APBB1IPQ7Z5R6 666 aaPredicted RBP18.06■□□□□ 0.48
DDX41-213ENST00000512027 ADHFE1Q8IWW8 467 aa18.06■□□□□ 0.48
DDX41-213ENST00000512027 TMEM130Q8N3G9 435 aa18.06■□□□□ 0.48
DDX41-213ENST00000512027 SLC22A17Q8WUG5 538 aa18.06■□□□□ 0.48
DDX41-213ENST00000512027 CASP10Q92851 521 aa18.06■□□□□ 0.48
DDX41-213ENST00000512027 CHAMP1Q96JM3 812 aa18.06■□□□□ 0.48
DDX41-213ENST00000512027 SNX27Q96L92 541 aa18.06■□□□□ 0.48
DDX41-213ENST00000512027 ZMAT2Q96NC0 199 aaKnown RBP18.06■□□□□ 0.48
DDX41-213ENST00000512027 IKZF4Q9H2S9 585 aa18.06■□□□□ 0.48
DDX41-213ENST00000512027 EPHX3Q9H6B9 360 aa18.06■□□□□ 0.48
DDX41-213ENST00000512027 MRPL17Q9NRX2 175 aaKnown RBP18.06■□□□□ 0.48
DDX41-213ENST00000512027 MORC2Q9Y6X9 1032 aaPredicted RBP18.06■□□□□ 0.48
DDX41-213ENST00000512027 C2orf16Q68DN1 1984 aa18.06■□□□□ 0.48
DDX41-213ENST00000512027 SMIM28A0A1B0GU29 152 aa18.05■□□□□ 0.48
DDX41-213ENST00000512027 TADA2AO75478 443 aa18.05■□□□□ 0.48
DDX41-213ENST00000512027 TOM1L1O75674 476 aa18.05■□□□□ 0.48
DDX41-213ENST00000512027 SP100P23497 879 aaPredicted RBP18.05■□□□□ 0.48
DDX41-213ENST00000512027 KLRC2P26717 231 aa18.05■□□□□ 0.48
DDX41-213ENST00000512027 STAT6P42226 847 aa18.05■□□□□ 0.48
DDX41-213ENST00000512027 MATR3P43243 847 aaKnown RBP eCLIP18.05■□□□□ 0.48
DDX41-213ENST00000512027 YARSP54577 528 aaKnown RBP18.05■□□□□ 0.48
DDX41-213ENST00000512027 ZC2HC1CQ53FD0 456 aaPredicted RBP18.05■□□□□ 0.48
DDX41-213ENST00000512027 RARS2Q5T160 578 aaKnown RBP18.05■□□□□ 0.48
DDX41-213ENST00000512027 KIAA0319Q5VV43 1072 aa18.05■□□□□ 0.48
DDX41-213ENST00000512027 SFR1Q86XK3 245 aa18.05■□□□□ 0.48
DDX41-213ENST00000512027 GLYCTKQ8IVS8 523 aa18.05■□□□□ 0.48
DDX41-213ENST00000512027 DDX12PQ92771 950 aa18.05■□□□□ 0.48
DDX41-213ENST00000512027 STAMQ92783 540 aa18.05■□□□□ 0.48
DDX41-213ENST00000512027 TBX20Q9UMR3 447 aa18.05■□□□□ 0.48
DDX41-213ENST00000512027 TRIOO75962 3097 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 C19orf67A6NJJ6 358 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 TISP43B9A030 160 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 TEX28O15482 410 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 BRD1O95696 1058 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 RPL17P18621 184 aaKnown RBP18.04■□□□□ 0.48
DDX41-213ENST00000512027 TNFSF9P41273 254 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 CLCN4P51793 760 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 CLCNKBP51801 687 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 DSG1Q02413 1049 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 RTP2Q5QGT7 225 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 ZBTB41Q5SVQ8 909 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 KIAA1841Q6NSI8 718 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 SLC39A4Q6P5W5 647 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 PRSS55Q6UWB4 352 aaPredicted RBP18.04■□□□□ 0.48
DDX41-213ENST00000512027 ALKAL1Q6UXT8 129 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 ZPBP2Q6X784 338 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 SV2BQ7L1I2 683 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 SUSD6Q92537 303 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 C18orf25Q96B23 403 aaPredicted RBP18.04■□□□□ 0.48
DDX41-213ENST00000512027 DNAJC19Q96DA6 116 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 EMILIN2Q9BXX0 1053 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 TOPORSQ9NS56 1045 aaPredicted RBP18.04■□□□□ 0.48
DDX41-213ENST00000512027 CHST7Q9NS84 486 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 TBC1D7Q9P0N9 293 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 PRKAG3Q9UGI9 489 aa18.04■□□□□ 0.48
DDX41-213ENST00000512027 ANK1P16157 1881 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 SF3B1O75533 1304 aaKnown RBP eCLIP18.03■□□□□ 0.48
DDX41-213ENST00000512027 H0YCG3 227 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 HNRNPDLO14979 420 aaKnown RBP18.03■□□□□ 0.48
DDX41-213ENST00000512027 CLDN3O15551 220 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 PPP6R2O75170 966 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 YEATS4O95619 227 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 CXCL8P10145 99 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 LIG4P49917 911 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 DNM1Q05193 864 aaKnown RBP18.03■□□□□ 0.48
DDX41-213ENST00000512027 SPAG1Q07617 926 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 MCL1Q07820 350 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 USP41Q3LFD5 358 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 SHC4Q6S5L8 630 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 CCDC73Q6ZRK6 1079 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 CEP57Q86XR8 500 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 C3orf58Q8NDZ4 430 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 RIN2Q8WYP3 895 aaPredicted RBP18.03■□□□□ 0.48
DDX41-213ENST00000512027 ACAP3Q96P50 834 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 STK39Q9UEW8 545 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 KCNG1Q9UIX4 513 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 DENND4AQ7Z401 1863 aa18.03■□□□□ 0.48
DDX41-213ENST00000512027 ANKRD63C9JTQ0 380 aa18.02■□□□□ 0.48
DDX41-213ENST00000512027 I3L4J1 428 aa18.02■□□□□ 0.48
DDX41-213ENST00000512027 SPATA31D3P0C874 917 aa18.02■□□□□ 0.48
DDX41-213ENST00000512027 CBX2Q14781 532 aaPredicted RBP18.02■□□□□ 0.48
DDX41-213ENST00000512027 SLC10A6Q3KNW5 377 aa18.02■□□□□ 0.48
DDX41-213ENST00000512027 XKR4Q5GH76 650 aa18.02■□□□□ 0.48
DDX41-213ENST00000512027 FAM171A1Q5VUB5 890 aa18.02■□□□□ 0.48
DDX41-213ENST00000512027 CD300LGQ6UXG3 332 aa18.02■□□□□ 0.48
DDX41-213ENST00000512027 TMC5Q6UXY8 1006 aa18.02■□□□□ 0.48
DDX41-213ENST00000512027 SPATA31D4Q6ZUB0 917 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms