RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 TRIOO75962 3097 aa14.56□□□□□ -0.08
RNF4-215ENST00000511843 FSD2A1L4K1 749 aa14.56□□□□□ -0.08
RNF4-215ENST00000511843 C19orf67A6NJJ6 358 aa14.56□□□□□ -0.08
RNF4-215ENST00000511843 TBCAO75347 108 aaKnown RBP14.56□□□□□ -0.08
RNF4-215ENST00000511843 TADA2AO75478 443 aa14.56□□□□□ -0.08
RNF4-215ENST00000511843 ZSCAN22P10073 491 aaPredicted RBP14.56□□□□□ -0.08
RNF4-215ENST00000511843 RPL17P18621 184 aaKnown RBP14.56□□□□□ -0.08
RNF4-215ENST00000511843 KLRC2P26717 231 aa14.56□□□□□ -0.08
RNF4-215ENST00000511843 NMT1P30419 496 aaKnown RBP14.56□□□□□ -0.08
RNF4-215ENST00000511843 DDIT3P35638 169 aa14.56□□□□□ -0.08
RNF4-215ENST00000511843 MATR3P43243 847 aaKnown RBP eCLIP14.56□□□□□ -0.08
RNF4-215ENST00000511843 SOX4Q06945 474 aaPredicted RBP14.56□□□□□ -0.08
RNF4-215ENST00000511843 RARS2Q5T160 578 aaKnown RBP14.56□□□□□ -0.08
RNF4-215ENST00000511843 RRAGBQ5VZM2 374 aa14.56□□□□□ -0.08
RNF4-215ENST00000511843 PDILTQ8N807 584 aa14.56□□□□□ -0.08
RNF4-215ENST00000511843 LINC00301Q8NCQ3 95 aa14.56□□□□□ -0.08
RNF4-215ENST00000511843 SUSD6Q92537 303 aa14.56□□□□□ -0.08
RNF4-215ENST00000511843 BICD1Q96G01 975 aa14.56□□□□□ -0.08
RNF4-215ENST00000511843 ZMAT2Q96NC0 199 aaKnown RBP14.56□□□□□ -0.08
RNF4-215ENST00000511843 PPP1R10Q96QC0 940 aaKnown RBP14.56□□□□□ -0.08
RNF4-215ENST00000511843 CCDC94Q9BW85 323 aaPredicted RBP14.56□□□□□ -0.08
RNF4-215ENST00000511843 DAXXQ9UER7 740 aaPredicted RBP14.56□□□□□ -0.08
RNF4-215ENST00000511843 CCDC39Q9UFE4 941 aa14.56□□□□□ -0.08
RNF4-215ENST00000511843 PRKAG3Q9UGI9 489 aa14.56□□□□□ -0.08
RNF4-215ENST00000511843 DOCK6Q96HP0 2047 aa14.56□□□□□ -0.08
RNF4-215ENST00000511843 SMIM28A0A1B0GU29 152 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 FAM86C2PA6NEL3 165 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 MYMKA6NI61 221 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 TEX28O15482 410 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 F13A1P00488 732 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 SPATA31D3P0C874 917 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 MCF2P10911 925 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 TXLNAP40222 546 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 CLCN4P51793 760 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 ZNF131P52739 623 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 YARSP54577 528 aaKnown RBP14.55□□□□□ -0.08
RNF4-215ENST00000511843 CBX2Q14781 532 aaPredicted RBP14.55□□□□□ -0.08
RNF4-215ENST00000511843 NOLC1Q14978 699 aaKnown RBP eCLIP14.55□□□□□ -0.08
RNF4-215ENST00000511843 ZC2HC1CQ53FD0 456 aaPredicted RBP14.55□□□□□ -0.08
RNF4-215ENST00000511843 KIAA0319Q5VV43 1072 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 KIAA1841Q6NSI8 718 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 PRSS55Q6UWB4 352 aaPredicted RBP14.55□□□□□ -0.08
RNF4-215ENST00000511843 SPATA31D4Q6ZUB0 917 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 APBB1IPQ7Z5R6 666 aaPredicted RBP14.55□□□□□ -0.08
RNF4-215ENST00000511843 RIN2Q8WYP3 895 aaPredicted RBP14.55□□□□□ -0.08
RNF4-215ENST00000511843 CHAMP1Q96JM3 812 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 RPGRIP1Q96KN7 1286 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 SNX27Q96L92 541 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 EMILIN2Q9BXX0 1053 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 IKZF4Q9H2S9 585 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 PARVGQ9HBI0 331 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 STK17AQ9UEE5 414 aa14.55□□□□□ -0.08
RNF4-215ENST00000511843 MYO10Q9HD67 2058 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 TISP43B9A030 160 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 SPTLC2O15270 562 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 TRAK2O60296 914 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 TOM1L1O75674 476 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 BRD1O95696 1058 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 TNFSF9P41273 254 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 STAT6P42226 847 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 CLCNKBP51801 687 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 DSG1Q02413 1049 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 SPAG1Q07617 926 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 TPRNQ4KMQ1 711 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 RTP2Q5QGT7 225 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 ZBTB41Q5SVQ8 909 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 ALKAL1Q6UXT8 129 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 TMC5Q6UXY8 1006 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 SFR1Q86XK3 245 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 CEP57Q86XR8 500 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 C3orf58Q8NDZ4 430 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 STAMQ92783 540 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 C18orf25Q96B23 403 aaPredicted RBP14.54□□□□□ -0.08
RNF4-215ENST00000511843 FBXL18Q96ME1 805 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 ZNF396Q96N95 335 aaPredicted RBP14.54□□□□□ -0.08
RNF4-215ENST00000511843 ACAP3Q96P50 834 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 FIZ1Q96SL8 496 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 CHST7Q9NS84 486 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 TBC1D7Q9P0N9 293 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 TBX20Q9UMR3 447 aa14.54□□□□□ -0.08
RNF4-215ENST00000511843 SF3B1O75533 1304 aaKnown RBP eCLIP14.53□□□□□ -0.081e-6■■■■■ 109.1
RNF4-215ENST00000511843 SPDYE4A6NLX3 237 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 I3L4J1 428 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 HNRNPDLO14979 420 aaKnown RBP14.53□□□□□ -0.08
RNF4-215ENST00000511843 CLDN3O15551 220 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 CXCL8P10145 99 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 HOXB8P17481 243 aaPredicted RBP14.53□□□□□ -0.08
RNF4-215ENST00000511843 LIG4P49917 911 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 USP41Q3LFD5 358 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 FAM171A1Q5VUB5 890 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 SLC39A4Q6P5W5 647 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 CD300LGQ6UXG3 332 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 ZPBP2Q6X784 338 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 PALB2Q86YC2 1186 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 DDX12PQ92771 950 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 DNAJC19Q96DA6 116 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 POP1Q99575 1024 aaKnown RBP14.53□□□□□ -0.08
RNF4-215ENST00000511843 PHF7Q9BWX1 381 aaPredicted RBP14.53□□□□□ -0.08
RNF4-215ENST00000511843 ADAM7Q9H2U9 754 aa14.53□□□□□ -0.08
RNF4-215ENST00000511843 POMKQ9H5K3 350 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms