RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 TARS2Q9BW92 718 aaKnown RBP16.83■□□□□ 0.28
COL1A1-213ENST00000511732 CDT1Q9H211 546 aa16.83■□□□□ 0.28
COL1A1-213ENST00000511732 UPF2Q9HAU5 1272 aaKnown RBP16.83■□□□□ 0.28
COL1A1-213ENST00000511732 KMT5AQ9NQR1 393 aa16.83■□□□□ 0.28
COL1A1-213ENST00000511732 SMC3Q9UQE7 1217 aa16.83■□□□□ 0.28
COL1A1-213ENST00000511732 WDFY4Q6ZS81 3184 aa16.83■□□□□ 0.28
COL1A1-213ENST00000511732 ABLIM1O14639 778 aa16.82■□□□□ 0.28
COL1A1-213ENST00000511732 GUCY2CP25092 1073 aa16.82■□□□□ 0.28
COL1A1-213ENST00000511732 MCM2P49736 904 aa16.82■□□□□ 0.28
COL1A1-213ENST00000511732 SUGP1Q8IWZ8 645 aaKnown RBP16.82■□□□□ 0.28
COL1A1-213ENST00000511732 UBALD2Q8IYN6 164 aa16.82■□□□□ 0.28
COL1A1-213ENST00000511732 SYT2Q8N9I0 419 aaPredicted RBP16.82■□□□□ 0.28
COL1A1-213ENST00000511732 LRRC15Q8TF66 581 aa16.82■□□□□ 0.28
COL1A1-213ENST00000511732 HDAC7Q8WUI4 952 aa16.82■□□□□ 0.28
COL1A1-213ENST00000511732 DRC1Q96MC2 740 aa16.82■□□□□ 0.28
COL1A1-213ENST00000511732 CLSTN3Q9BQT9 956 aa16.82■□□□□ 0.28
COL1A1-213ENST00000511732 TTPALQ9BTX7 342 aa16.82■□□□□ 0.28
COL1A1-213ENST00000511732 MRPL4Q9BYD3 311 aaKnown RBP16.82■□□□□ 0.28
COL1A1-213ENST00000511732 RHOBTB2Q9BYZ6 727 aa16.82■□□□□ 0.28
COL1A1-213ENST00000511732 GOLGA2P5Q9HBQ8 144 aa16.82■□□□□ 0.28
COL1A1-213ENST00000511732 WDR6Q9NNW5 1121 aaKnown RBP16.82■□□□□ 0.28
COL1A1-213ENST00000511732 SLC16A4O15374 487 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 MEFVO15553 781 aaPredicted RBP16.81■□□□□ 0.28
COL1A1-213ENST00000511732 ADAM12O43184 909 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 C1RP00736 705 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 PROZP22891 400 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 GRM5P41594 1212 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 CLCNKBP51801 687 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 SLC12A3P55017 1021 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 OSTNP61366 133 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 SOX4Q06945 474 aaPredicted RBP16.81■□□□□ 0.28
COL1A1-213ENST00000511732 ZNF568Q3ZCX4 644 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 TMEM119Q4V9L6 283 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 XKR4Q5GH76 650 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 LARP1BQ659C4 914 aaKnown RBP16.81■□□□□ 0.28
COL1A1-213ENST00000511732 ARL6IP4Q66PJ3 421 aaKnown RBP16.81■□□□□ 0.28
COL1A1-213ENST00000511732 ALKAL1Q6UXT8 129 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 OTOP3Q7RTS5 596 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 CEP57Q86XR8 500 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 C3orf58Q8NDZ4 430 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 PIK3R5Q8WYR1 880 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 ACSF2Q96CM8 615 aaPredicted RBP16.81■□□□□ 0.28
COL1A1-213ENST00000511732 ZBTB45Q96K62 511 aaPredicted RBP16.81■□□□□ 0.28
COL1A1-213ENST00000511732 NTPCRQ9BSD7 190 aaKnown RBP16.81■□□□□ 0.28
COL1A1-213ENST00000511732 NT5C3AQ9H0P0 336 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 PLEKHA4Q9H4M7 779 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 C17orf75Q9HAS0 396 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 DPP7Q9UHL4 492 aa16.81■□□□□ 0.28
COL1A1-213ENST00000511732 NPHP3-ACAD11A0A0J9YXS1 232 aa16.8■□□□□ 0.28
COL1A1-213ENST00000511732 SMIM28A0A1B0GU29 152 aa16.8■□□□□ 0.28
COL1A1-213ENST00000511732 TMEM189-UBE2V1I3L0A0 370 aa16.8■□□□□ 0.28
COL1A1-213ENST00000511732 PLA2G4BP0C869 781 aa16.8■□□□□ 0.28
COL1A1-213ENST00000511732 AVPR2P30518 371 aa16.8■□□□□ 0.28
COL1A1-213ENST00000511732 CACNB1Q02641 598 aaPredicted RBP16.8■□□□□ 0.28
COL1A1-213ENST00000511732 GRIN1Q05586 938 aa16.8■□□□□ 0.28
COL1A1-213ENST00000511732 PSMD5Q16401 504 aa16.8■□□□□ 0.28
COL1A1-213ENST00000511732 UPP1Q16831 310 aa16.8■□□□□ 0.28
COL1A1-213ENST00000511732 ARSHQ5FYA8 562 aa16.8■□□□□ 0.28
COL1A1-213ENST00000511732 CYP26C1Q6V0L0 522 aa16.8■□□□□ 0.28
COL1A1-213ENST00000511732 ALYREFQ86V81 257 aaKnown RBP16.8■□□□□ 0.28
COL1A1-213ENST00000511732 SMG7Q92540 1137 aaKnown RBP16.8■□□□□ 0.28
COL1A1-213ENST00000511732 ZMAT2Q96NC0 199 aaKnown RBP16.8■□□□□ 0.28
COL1A1-213ENST00000511732 TIPINQ9BVW5 301 aa16.8■□□□□ 0.28
COL1A1-213ENST00000511732 KCNK12Q9HB15 430 aa16.8■□□□□ 0.28
COL1A1-213ENST00000511732 RBM19Q9Y4C8 960 aaKnown RBP16.8■□□□□ 0.28
COL1A1-213ENST00000511732 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.8■□□□□ 0.28
COL1A1-213ENST00000511732 MUC6Q6W4X9 2439 aa16.8■□□□□ 0.28
COL1A1-213ENST00000511732 DOCK6Q96HP0 2047 aa16.79■□□□□ 0.28
COL1A1-213ENST00000511732 CLUHO75153 1309 aa16.79■□□□□ 0.28
COL1A1-213ENST00000511732 B3GAT3O94766 335 aa16.79■□□□□ 0.28
COL1A1-213ENST00000511732 PLS3P13797 630 aa16.79■□□□□ 0.28
COL1A1-213ENST00000511732 BRCC3P46736 316 aa16.79■□□□□ 0.28
COL1A1-213ENST00000511732 CREMQ03060 361 aa16.79■□□□□ 0.28
COL1A1-213ENST00000511732 TCF15Q12870 199 aa16.79■□□□□ 0.28
COL1A1-213ENST00000511732 TMEM161BQ8NDZ6 487 aa16.79■□□□□ 0.28
COL1A1-213ENST00000511732 SPIRE2Q8WWL2 714 aa16.79■□□□□ 0.28
COL1A1-213ENST00000511732 MYADMQ96S97 322 aa16.79■□□□□ 0.28
COL1A1-213ENST00000511732 PRKD2Q9BZL6 878 aa16.79■□□□□ 0.28
COL1A1-213ENST00000511732 DAXXQ9UER7 740 aaPredicted RBP16.79■□□□□ 0.28
COL1A1-213ENST00000511732 FBXW11Q9UKB1 542 aa16.79■□□□□ 0.28
COL1A1-213ENST00000511732 PDCD11Q14690 1871 aaKnown RBP16.79■□□□□ 0.28
COL1A1-213ENST00000511732 DOCK8Q8NF50 2099 aa16.79■□□□□ 0.28
COL1A1-213ENST00000511732 CITO14578 2027 aa16.79■□□□□ 0.28
COL1A1-213ENST00000511732 I3L4J1 428 aa16.78■□□□□ 0.28
COL1A1-213ENST00000511732 ZMYND10O75800 440 aa16.78■□□□□ 0.28
COL1A1-213ENST00000511732 MCF2P10911 925 aa16.78■□□□□ 0.28
COL1A1-213ENST00000511732 FGFR3P22607 806 aa16.78■□□□□ 0.28
COL1A1-213ENST00000511732 CUL4AQ13619 759 aa16.78■□□□□ 0.28
COL1A1-213ENST00000511732 SEZ6Q53EL9 994 aa16.78■□□□□ 0.28
COL1A1-213ENST00000511732 ELMSAN1Q6PJG2 1045 aa16.78■□□□□ 0.28
COL1A1-213ENST00000511732 DCLRE1AQ6PJP8 1040 aa16.78■□□□□ 0.28
COL1A1-213ENST00000511732 MPZL3Q6UWV2 235 aa16.78■□□□□ 0.28
COL1A1-213ENST00000511732 RSPO2Q6UXX9 243 aaPredicted RBP16.78■□□□□ 0.28
COL1A1-213ENST00000511732 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.78■□□□□ 0.28
COL1A1-213ENST00000511732 APBB1IPQ7Z5R6 666 aaPredicted RBP16.78■□□□□ 0.28
COL1A1-213ENST00000511732 KCTD17Q8N5Z5 321 aa16.78■□□□□ 0.28
COL1A1-213ENST00000511732 SNX27Q96L92 541 aa16.78■□□□□ 0.28
COL1A1-213ENST00000511732 PHOX2BQ99453 314 aa16.78■□□□□ 0.28
COL1A1-213ENST00000511732 CCDC94Q9BW85 323 aaPredicted RBP16.78■□□□□ 0.28
COL1A1-213ENST00000511732 PIDD1Q9HB75 910 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms