RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CAP1Q01518 475 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 DRAP1Q14919 205 aaPredicted RBP16.43■□□□□ 0.22
SCLT1-209ENST00000511426 ARHGAP29Q52LW3 1261 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 PHLDB3Q6NSJ2 640 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 IRF2BP2Q7Z5L9 587 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 DESI2Q9BSY9 194 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 SEZ6LQ9BYH1 1024 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 PDZD7Q9H5P4 517 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 RPF1Q9H9Y2 349 aaKnown RBP16.43■□□□□ 0.22
SCLT1-209ENST00000511426 PDE11AQ9HCR9 933 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 KAT6AQ92794 2004 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 TTLL13PA6NNM8 815 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 M0QZ92 97 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 TREHO43280 583 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 B4GALT5O43286 388 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 KRT86O43790 486 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 EIF4A3P38919 411 aaKnown RBP16.43■□□□□ 0.22
SCLT1-209ENST00000511426 VAV2P52735 878 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 TRIM32Q13049 653 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 BMS1Q14692 1282 aaKnown RBP16.43■□□□□ 0.22
SCLT1-209ENST00000511426 SLC18A3Q16572 532 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 DUOXA2Q1HG44 320 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 WDR44Q5JSH3 913 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 NOTUMQ6P988 496 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 ZNF296Q8WUU4 475 aaPredicted RBP16.43■□□□□ 0.22
SCLT1-209ENST00000511426 TSPAN18Q96SJ8 248 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 IMPG2Q9BZV3 1241 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 FAM49AQ9H0Q0 323 aaPredicted RBP16.43■□□□□ 0.22
SCLT1-209ENST00000511426 C1orf112Q9NSG2 853 aa16.43■□□□□ 0.22
SCLT1-209ENST00000511426 KIF5CO60282 957 aa16.42■□□□□ 0.22
SCLT1-209ENST00000511426 ASGR1P07306 291 aa16.42■□□□□ 0.22
SCLT1-209ENST00000511426 IRX5P78411 483 aaPredicted RBP16.42■□□□□ 0.22
SCLT1-209ENST00000511426 KIZQ2M2Z5 673 aa16.42■□□□□ 0.22
SCLT1-209ENST00000511426 CXCL17Q6UXB2 119 aa16.42■□□□□ 0.22
SCLT1-209ENST00000511426 ZBTB33Q86T24 672 aa16.42■□□□□ 0.22
SCLT1-209ENST00000511426 KIF18AQ8NI77 898 aa16.42■□□□□ 0.22
SCLT1-209ENST00000511426 TAS1R2Q8TE23 839 aa16.42■□□□□ 0.22
SCLT1-209ENST00000511426 DNAJB3Q8WWF6 145 aa16.42■□□□□ 0.22
SCLT1-209ENST00000511426 DHX38Q92620 1227 aaKnown RBP16.42■□□□□ 0.22
SCLT1-209ENST00000511426 BEGAINQ9BUH8 593 aa16.42■□□□□ 0.22
SCLT1-209ENST00000511426 HMX1Q9NP08 348 aaPredicted RBP16.42■□□□□ 0.22
SCLT1-209ENST00000511426 UBE2TQ9NPD8 197 aaPredicted RBP16.42■□□□□ 0.22
SCLT1-209ENST00000511426 CAND2O75155 1236 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 HARSP12081 509 aaKnown RBP16.41■□□□□ 0.22
SCLT1-209ENST00000511426 TBXAS1P24557 533 aaPredicted RBP16.41■□□□□ 0.22
SCLT1-209ENST00000511426 GRK4P32298 578 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 GRM5P41594 1212 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 PIK3CAP42336 1068 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 SNX17Q15036 470 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 KCNA10Q16322 511 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 NBPF20Q3BBV1 942 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 TDRD10Q5VZ19 366 aaKnown RBP16.41■□□□□ 0.22
SCLT1-209ENST00000511426 EEF1DP3Q658K8 133 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 SLC27A1Q6PCB7 646 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 RUFY4Q6ZNE9 571 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 CATSPER4Q7RTX7 472 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 SERINC5Q86VE9 423 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 ACRBPQ8NEB7 543 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 ZNF516Q92618 1163 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 ANKRD36BP1Q96IX9 119 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 POP1Q99575 1024 aaKnown RBP16.41■□□□□ 0.22
SCLT1-209ENST00000511426 PLEKHA5Q9HAU0 1116 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 EVPLQ92817 2033 aa16.41■□□□□ 0.22
SCLT1-209ENST00000511426 EVI5O60447 810 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 TNNC2P02585 160 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 CHMP4BP1P59074 171 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 APBA1Q02410 837 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 KIF5AQ12840 1032 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 BIRC3Q13489 604 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 ENOX2Q16206 610 aaKnown RBP16.4■□□□□ 0.22
SCLT1-209ENST00000511426 ZBTB41Q5SVQ8 909 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 KIAA1328Q86T90 577 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 HELQQ8TDG4 1101 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 SHC3Q92529 594 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 TAF4BQ92750 862 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 CCDC94Q9BW85 323 aaPredicted RBP16.4■□□□□ 0.22
SCLT1-209ENST00000511426 IFIH1Q9BYX4 1025 aaKnown RBP16.4■□□□□ 0.22
SCLT1-209ENST00000511426 GPR88Q9GZN0 384 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 FAM124BQ9H5Z6 455 aaPredicted RBP16.4■□□□□ 0.22
SCLT1-209ENST00000511426 TOPORSQ9NS56 1045 aaPredicted RBP16.4■□□□□ 0.22
SCLT1-209ENST00000511426 DERAQ9Y315 318 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 REXO2Q9Y3B8 237 aaKnown RBP16.4■□□□□ 0.22
SCLT1-209ENST00000511426 C2CD2Q9Y426 696 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 PJA2O43164 708 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 HLA-DRAP01903 254 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 INHAP05111 366 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 TMEM191BP0C7N4 346 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 STAG3L1P0CL83 205 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 TNFSF9P41273 254 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 TERF1P54274 439 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 HIC1Q14526 733 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 FAM43BQ6ZT52 329 aaPredicted RBP16.4■□□□□ 0.22
SCLT1-209ENST00000511426 THNSL1Q8IYQ7 743 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 FAM71AQ8IYT1 594 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 PPM1KQ8N3J5 372 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 SEMA4DQ92854 862 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 ZNF668Q96K58 619 aaPredicted RBP16.4■□□□□ 0.22
SCLT1-209ENST00000511426 OSMRQ99650 979 aa16.4■□□□□ 0.22
SCLT1-209ENST00000511426 CELF4Q9BZC1 486 aaKnown RBP16.4■□□□□ 0.22
SCLT1-209ENST00000511426 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms