RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 ZNF287Q9HBT7 754 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 PNPLA8Q9NP80 782 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 SARS2Q9NP81 518 aaKnown RBP6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 PIH1D1Q9NWS0 290 aaKnown RBP6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 STAP2Q9UGK3 403 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 CDC42EP3Q9UKI2 254 aa6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 MORC2Q9Y6X9 1032 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P47-201ENST00000511281 A0A1W2PPC4 97 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 C2orf78A6NCI8 922 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 TEX33O43247 280 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 NCK2O43639 380 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 EIF5BO60841 1220 aaKnown RBP6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 ITGA10O75578 1167 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 IL2RBP14784 551 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 SLC7A1P30825 629 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 GRK6P43250 576 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 KCNQ1P51787 676 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 PER3P56645 1201 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 PDCD2Q16342 344 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 FLYWCH1Q4VC44 716 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 TLDC1Q6P9B6 456 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 ZNF572Q7Z3I7 529 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 SESTD1Q86VW0 696 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 SKAP1Q86WV1 359 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 CPXCR1Q8N123 301 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 CCHCR1Q8TD31 782 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 ARL8AQ96BM9 186 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 TMEM41AQ96HV5 264 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 ISCA1Q9BUE6 129 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 EPB41L4BQ9H329 900 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 AGO4Q9HCK5 861 aaKnown RBP6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 GCM1Q9NP62 436 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 CNNM1Q9NRU3 951 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 TMEM140Q9NV12 185 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 ZNF69Q9UC07 566 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 PGAP2Q9UHJ9 254 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 OGDHLQ9ULD0 1010 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 MED16Q9Y2X0 877 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 SNX13Q9Y5W8 968 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 ATRNL1Q5VV63 1379 aa6.64□□□□□ -1.35
HMGB1P47-201ENST00000511281 A0A087WV62 115 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 POM121BA6NF01 834 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 F2RL2O00254 374 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 ADAMTS3O15072 1205 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 SH3BP5O60239 455 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 ADAM23O75077 832 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 ABCB4P21439 1286 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 RPL13P26373 211 aaKnown RBP6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 SMARCA1P28370 1054 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 PCSK1P29120 753 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 IL13P35225 146 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 HTRA4P83105 476 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 GAGE13Q4V321 117 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 TRMT10BQ6PF06 316 aaKnown RBP6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 Q6ZUG5 572 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 LARP4Q71RC2 724 aaKnown RBP eCLIP6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 PPP1R3BQ86XI6 285 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 PLXDC1Q8IUK5 500 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 DCBLD1Q8N8Z6 715 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 RAB24Q969Q5 203 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 ZBTB8AQ96BR9 441 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 SLC7A6OSQ96CW6 309 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 YTHDC1Q96MU7 727 aaKnown RBP6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 UHRF1Q96T88 793 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 ENKD1Q9H0I2 346 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 ADAM7Q9H2U9 754 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 PRDM16Q9HAZ2 1276 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 JADE2Q9NQC1 790 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 FAM53CQ9NYF3 392 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 AJAP1Q9UKB5 411 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 ZDHHC8Q9ULC8 765 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 PAXBP1Q9Y5B6 917 aa6.63□□□□□ -1.35
HMGB1P47-201ENST00000511281 F8W8V4 182 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 NRP1O14786 923 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 TLR5O60602 858 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 PLA2G1BP04054 148 aaKnown RBP6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 THP07101 528 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 KITP10721 976 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 ALOX15P16050 662 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 SARSP49591 514 aaKnown RBP6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 EPHB3P54753 998 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 ADAM8P78325 824 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 ADAM15Q13444 863 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 PCOLCEQ15113 449 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 OTUD7BQ6GQQ9 843 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 HIBCHQ6NVY1 386 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 TMED8Q6PL24 325 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 RTKN2Q8IZC4 609 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 SPATA5Q8NB90 893 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 NUDT10Q8NFP7 164 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 NUDT11Q96G61 164 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 LIN37Q96GY3 246 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 TTLL2Q9BWV7 592 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 BRIP1Q9BX63 1249 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 SENP6Q9GZR1 1112 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 SPATA6Q9NWH7 488 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 ING3Q9NXR8 418 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 STK32BQ9NY57 414 aa6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 COL20A1Q9P218 1284 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms