RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 SENP1Q9P0U3 644 aa9.72□□□□□ -0.85
SNF8-210ENST00000511214 CTNNAL1Q9UBT7 734 aa9.72□□□□□ -0.85
SNF8-210ENST00000511214 EXOC7Q9UPT5 735 aa9.72□□□□□ -0.85
SNF8-210ENST00000511214 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.72□□□□□ -0.85
SNF8-210ENST00000511214 MRPL11Q9Y3B7 192 aaKnown RBP9.72□□□□□ -0.85
SNF8-210ENST00000511214 STARD13Q9Y3M8 1113 aa9.72□□□□□ -0.85
SNF8-210ENST00000511214 FARP1Q9Y4F1 1045 aaPredicted RBP9.72□□□□□ -0.85
SNF8-210ENST00000511214 RBBP6Q7Z6E9 1792 aaKnown RBP9.72□□□□□ -0.85
SNF8-210ENST00000511214 ATRNL1Q5VV63 1379 aa9.72□□□□□ -0.85
SNF8-210ENST00000511214 TMEM110-MUSTN1A8MSY1 372 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 ABLIM1O14639 778 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 TP73O15350 636 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 ENTPD3O75355 529 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 UNC5CO95185 931 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 SGPL1O95470 568 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 PLS3P13797 630 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 GYS1P13807 737 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 BRAFP15056 766 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 CALRP27797 417 aaKnown RBP9.71□□□□□ -0.86
SNF8-210ENST00000511214 POLD1P28340 1107 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 STX2P32856 288 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 MSH2P43246 934 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 SLCO1A2P46721 670 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 IFNAR2P48551 515 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 GPC3P51654 580 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 PPP3CAQ08209 521 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 MYO1EQ12965 1108 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 IKQ13123 557 aaPredicted RBP9.71□□□□□ -0.86
SNF8-210ENST00000511214 TNIP1Q15025 636 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 ZKSCAN8Q15776 578 aaPredicted RBP9.71□□□□□ -0.86
SNF8-210ENST00000511214 USH1GQ495M9 461 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 C1orf220Q5T0J3 134 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 NUGGCQ68CJ6 796 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 AADACL2Q6P093 401 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 PADI6Q6TGC4 694 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 FAM196AQ6ZSG2 479 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 DAW1Q8N136 415 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 TEX9Q8N6V9 391 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 CCDC89Q8N998 374 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 AGAP11Q8TF27 550 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 INPP5DQ92835 1189 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 FAM212AQ96EL1 285 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 STAMBPL1Q96FJ0 436 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 TTC25Q96NG3 672 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 UIMC1Q96RL1 719 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 DCLK3Q9C098 648 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 TMEM117Q9H0C3 514 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 CCDC113Q9H0I3 377 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 TMEM8AQ9HCN3 771 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 EURLQ9NYK6 297 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 HSPBP1Q9NZL4 362 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 ASIC3Q9UHC3 531 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 ANAPC5Q9UJX4 755 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 PRR12Q9ULL5 1215 aa9.71□□□□□ -0.86
SNF8-210ENST00000511214 KIF3CO14782 793 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 CLGNO14967 610 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 PRPF4O43172 522 aaKnown RBP eCLIP9.7□□□□□ -0.86
SNF8-210ENST00000511214 THAP12O43422 761 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 PSTPIP1O43586 416 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 P4HBP07237 508 aaKnown RBP9.7□□□□□ -0.86
SNF8-210ENST00000511214 CYP11B1P15538 503 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 HOXA13P31271 388 aaPredicted RBP9.7□□□□□ -0.86
SNF8-210ENST00000511214 RASSF2P50749 326 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 STAT2P52630 851 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 YARSP54577 528 aaKnown RBP9.7□□□□□ -0.86
SNF8-210ENST00000511214 KCNJ2P63252 427 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 IRX1P78414 480 aaPredicted RBP9.7□□□□□ -0.86
SNF8-210ENST00000511214 NFIAQ12857 509 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 SETDB1Q15047 1291 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 CCNG2Q16589 344 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 LONRF1Q17RB8 773 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 CLEC16AQ2KHT3 1053 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 RBM26Q5T8P6 1007 aaKnown RBP9.7□□□□□ -0.86
SNF8-210ENST00000511214 KRT39Q6A163 491 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 PODNQ7Z5L7 613 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 CCDC25Q86WR0 208 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 SAMD3Q8N6K7 520 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 CYP2W1Q8TAV3 490 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 ZNF398Q8TD17 642 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 KREMEN1Q96MU8 473 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 NT5C1BQ96P26 610 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 TGS1Q96RS0 853 aaKnown RBP9.7□□□□□ -0.86
SNF8-210ENST00000511214 LXNQ9BS40 222 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 ZNF577Q9BSK1 485 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 TRIM6Q9C030 488 aaPredicted RBP9.7□□□□□ -0.86
SNF8-210ENST00000511214 MTFR1LQ9H019 292 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 LRMDAQ9H2I8 198 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 RANBP17Q9H2T7 1088 aaKnown RBP9.7□□□□□ -0.86
SNF8-210ENST00000511214 UNC45AQ9H3U1 944 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 BCAS3Q9H6U6 928 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 SSU72Q9NP77 194 aaKnown RBP9.7□□□□□ -0.86
SNF8-210ENST00000511214 NINJ2Q9NZG7 142 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 FAM198AQ9UFP1 575 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 SMG5Q9UPR3 1016 aaKnown RBP9.7□□□□□ -0.86
SNF8-210ENST00000511214 NEU2Q9Y3R4 380 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 USH1CQ9Y6N9 552 aa9.7□□□□□ -0.86
SNF8-210ENST00000511214 TCRBV7S2A1N4TA0A589 114 aa9.69□□□□□ -0.86
SNF8-210ENST00000511214 DDTLA6NHG4 134 aaPredicted RBP9.69□□□□□ -0.86
SNF8-210ENST00000511214 FAM47DPA6NHR8 397 aa9.69□□□□□ -0.86
SNF8-210ENST00000511214 CLDN3O15551 220 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms