RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 MARCH10Q8NA82 808 aaPredicted RBP11.18□□□□□ -0.62
NEK1-206ENST00000510533 RBM15Q96T37 977 aaKnown RBP eCLIP11.18□□□□□ -0.62
NEK1-206ENST00000510533 ARHGEF9O43307 516 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 ATP9BO43861 1147 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 MYO1DO94832 1006 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 NEK2P51955 445 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 FOXO4P98177 505 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 TTLL4Q14679 1199 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 LONP2Q86WA8 852 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 PBXIP1Q96AQ6 731 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 IL17RAQ96F46 866 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 ATXN7L3BQ96GX2 97 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 SGSM3Q96HU1 749 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 XPO6Q96QU8 1125 aaKnown RBP11.17□□□□□ -0.62
NEK1-206ENST00000510533 PCDHA10Q9Y5I2 948 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 PHF20L1A8MW92 1017 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 ECE2O60344 883 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 CYFIP1Q7L576 1253 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 CATSPER3Q86XQ3 398 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 TRIM45Q9H8W5 580 aaPredicted RBP11.17□□□□□ -0.62
NEK1-206ENST00000510533 AGPAT5Q9NUQ2 364 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 AURKCQ9UQB9 309 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 SAMD9LQ8IVG5 1584 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 KIAA0391O15091 583 aaKnown RBP11.17□□□□□ -0.62
NEK1-206ENST00000510533 KCNN4O15554 427 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 C21orf2O43822 256 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 GPSM2P81274 684 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 KLHL11Q9NVR0 708 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 TUBE1Q9UJT0 475 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 COL15A1P39059 1388 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 SHROOM2Q13796 1616 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 KIF1CO43896 1103 aaKnown RBP11.17□□□□□ -0.62
NEK1-206ENST00000510533 MOCS2O96007 188 aaPredicted RBP11.17□□□□□ -0.62
NEK1-206ENST00000510533 UCHL3P15374 230 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 SESN2P58004 480 aaPredicted RBP11.17□□□□□ -0.62
NEK1-206ENST00000510533 SCARF1Q14162 830 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 INPP5AQ14642 412 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 CNGA3Q16281 694 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 FBXW10Q5XX13 1052 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 ANKRD7Q92527 254 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 PGBD4Q96DM1 585 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 WRNIP1Q96S55 665 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 TIPINQ9BVW5 301 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 NPHS2Q9NP85 383 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 RBM12Q9NTZ6 932 aaKnown RBP11.17□□□□□ -0.62
NEK1-206ENST00000510533 PSMC3IPQ9P2W1 217 aaPredicted RBP11.17□□□□□ -0.62
NEK1-206ENST00000510533 LAMC1P11047 1609 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 CDC42BPGQ6DT37 1551 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 AKR1B1P15121 316 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 YWHABP31946 246 aaKnown RBP11.17□□□□□ -0.62
NEK1-206ENST00000510533 CYTH1Q15438 398 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 TRADDQ15628 312 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 KYAT1Q16773 422 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 LMBRD2Q68DH5 695 aaPredicted RBP11.17□□□□□ -0.62
NEK1-206ENST00000510533 CNPY4Q8N129 248 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 TC2NQ8N9U0 490 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 DTX3LQ8TDB6 740 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 AFG1LQ8WV93 481 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 TRIM54Q9BYV2 358 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 SIK2Q9H0K1 926 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 CASS4Q9NQ75 786 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 HSPBP1Q9NZL4 362 aa11.17□□□□□ -0.62
NEK1-206ENST00000510533 PSMD14O00487 310 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 EFNA5P52803 228 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 PTK2BQ14289 1009 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 NAB2Q15742 525 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 CEP55Q53EZ4 464 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 MDH1BQ5I0G3 518 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 RAD9BQ6WBX8 426 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 TAS2R42Q7RTR8 314 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 C18orf8Q96DM3 657 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 SEC16BQ96JE7 1060 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 ZNF668Q96K58 619 aaPredicted RBP11.16□□□□□ -0.62
NEK1-206ENST00000510533 TRIM62Q9BVG3 475 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 PPCSQ9HAB8 311 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 TRIM10Q9UDY6 481 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 DBR1Q9UK59 544 aaKnown RBP11.16□□□□□ -0.62
NEK1-206ENST00000510533 FAM47DPA6NHR8 397 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 ANGPT2O15123 496 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 FMO5P49326 533 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 STX3Q13277 289 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 MED21Q13503 144 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 C12orf60Q5U649 245 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 KIF12Q96FN5 646 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 ZNF560Q96MR9 790 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 SENP7Q9BQF6 1050 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 UNC45AQ9H3U1 944 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 ACAD9Q9H845 621 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 NDFIP2Q9NV92 336 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 RGL1Q9NZL6 768 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 STXBP3O00186 592 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 DFFAO00273 331 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 HLA-DPA1P20036 260 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 ELMSAN1Q6PJG2 1045 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 SLC30A5Q8TAD4 765 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 SPATA17Q96L03 361 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 RUBCNLQ9H714 662 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 AIPL1Q9NZN9 384 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 NEU2Q9Y3R4 380 aa11.16□□□□□ -0.62
NEK1-206ENST00000510533 USP42Q9H9J4 1324 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms