RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 MRPL44Q9H9J2 332 aaKnown RBP12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 CHST7Q9NS84 486 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 CNTN3Q9P232 1028 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 PRG3Q9Y2Y8 225 aaPredicted RBP12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 BRWD1Q9NSI6 2320 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 VCANP13611 3396 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 NLRC5Q86WI3 1866 aa12.85□□□□□ -0.35
HMGXB3-203ENST00000510472 A0A1B0GVL5 298 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 TTC26A0AVF1 554 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 HNRNPDLO14979 420 aaKnown RBP12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 PER2O15055 1255 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 LINC01565O15544 149 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 CSPG5O95196 566 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 CXCL14O95715 111 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 GLP2RO95838 553 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 SOD2P04179 222 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 CLTAP09496 248 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 IDEP14735 1019 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 PFKFB1P16118 471 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 IGFBP6P24592 240 aaPredicted RBP12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 LIG4P49917 911 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 OSTNP61366 133 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 SOX4Q06945 474 aaPredicted RBP12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 COASYQ13057 564 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 SMC1AQ14683 1233 aaKnown RBP12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 ZBTB6Q15916 424 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 AAK1Q2M2I8 961 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 SEZ6Q53EL9 994 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 TJAP1Q5JTD0 557 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 ZBTB41Q5SVQ8 909 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 L1TD1Q5T7N2 865 aaKnown RBP12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 KIAA0319Q5VV43 1072 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 PLPP4Q5VZY2 271 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 RBM23Q86U06 439 aaKnown RBP12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 CCDC65Q8IXS2 484 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 GPR65Q8IYL9 337 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 VN1R2Q8NFZ6 395 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 PPP2R3CQ969Q6 453 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 MSLNLQ96KJ4 702 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 GPR62Q9BZJ7 368 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 PLEKHA5Q9HAU0 1116 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 TOPORSQ9NS56 1045 aaPredicted RBP12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 TBC1D7Q9P0N9 293 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 CLEC1BQ9P126 229 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 ANKFY1Q9P2R3 1169 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 CACNG4Q9UBN1 327 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 SERTAD1Q9UHV2 236 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 PCDHB13Q9Y5F0 798 aa12.84□□□□□ -0.35
HMGXB3-203ENST00000510472 KIAA1671Q9BY89 1806 aa12.83□□□□□ -0.35
HMGXB3-203ENST00000510472 PVALEFA0A1B0GWK0 134 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 TISP43B9A030 160 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 TMEM189-UBE2V1I3L0A0 370 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 OGTO15294 1046 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 TBX10O75333 385 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 NR1I2O75469 434 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 MYBP10242 640 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 KCNA5P22460 613 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 CASP1P29466 404 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 HOXD13P35453 343 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 TNFSF9P41273 254 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 KCNQ1P51787 676 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 NDUFA8P51970 172 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 YARSP54577 528 aaKnown RBP12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 POU5F1Q01860 360 aaKnown RBP12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 ALCAMQ13740 583 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 HSP90AA2PQ14568 343 aaPredicted RBP12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 PTPN14Q15678 1187 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 KYAT1Q16773 422 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 GLRA4Q5JXX5 417 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 SLFN12LQ6IEE8 588 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 UNC13DQ70J99 1090 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 EPM2AIP1Q7L775 607 aaPredicted RBP12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 GLIS3Q8NEA6 775 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 RABGGTAQ92696 567 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 HPS3Q969F9 1004 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 BICD1Q96G01 975 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 PAGE5Q96GU1 130 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 IGFLR1Q9H665 355 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 GDPD2Q9HCC8 539 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 ENTPD7Q9NQZ7 604 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 CLDND1Q9NY35 253 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 USP25Q9UHP3 1055 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 CPSF3Q9UKF6 684 aaKnown RBP12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 ADAM28Q9UKQ2 775 aa12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 CIZ1Q9ULV3 898 aaPredicted RBP12.83□□□□□ -0.36
HMGXB3-203ENST00000510472 CASTOR2A6NHX0 329 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 H3BQ06 376 aaPredicted RBP12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 KLRC4O43908 158 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 CLASP2O75122 1294 aaKnown RBP12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 KIF4AO95239 1232 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 HARSP12081 509 aaKnown RBP12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 RBM10P98175 930 aaKnown RBP12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 DSG1Q02413 1049 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 CUL4BQ13620 913 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 ENOX2Q16206 610 aaKnown RBP12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 UPP1Q16831 310 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 FUT10Q6P4F1 479 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 DCLRE1AQ6PJP8 1040 aa12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 CRELD2Q6UXH1 353 aaPredicted RBP12.82□□□□□ -0.36
HMGXB3-203ENST00000510472 GRAMD1CQ8IYS0 662 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms