RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 PPM1AP35813 382 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 AFMP43652 599 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 WNT7BP56706 349 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 KRT85P78386 507 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 MRPS5P82675 430 aaKnown RBP14.85□□□□□ -0.03
SNF8-206ENST00000509989 MCL1Q07820 350 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 GRIK3Q13003 919 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 COASYQ13057 564 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 CUL4BQ13620 913 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 KCNC3Q14003 757 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 DUSP6Q16828 381 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 CSPP1Q1MSJ5 1256 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 LLGL2Q6P1M3 1020 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 ZPBP2Q6X784 338 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 MAP4K3Q8IVH8 894 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 RNF168Q8IYW5 571 aaPredicted RBP14.85□□□□□ -0.03
SNF8-206ENST00000509989 KCNN1Q92952 543 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 BICD1Q96G01 975 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 FAM84AQ96KN4 292 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 SNX27Q96L92 541 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 RPS6KC1Q96S38 1066 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 APOL5Q9BWW9 433 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 TRIM9Q9C026 710 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 TLE6Q9H808 572 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 PANK4Q9NVE7 773 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 HPSEQ9Y251 543 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 MTCL1Q9Y4B5 1905 aaKnown RBP14.85□□□□□ -0.03
SNF8-206ENST00000509989 SCN1AP35498 2009 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 TTC28Q96AY4 2481 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 C2CD2LO14523 706 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 LILRB3O75022 631 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 PRPF6O94906 941 aaKnown RBP14.84□□□□□ -0.03
SNF8-206ENST00000509989 PIGRP01833 764 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 PRR29P0C7W0 189 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 CXCL8P10145 99 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 ADSSP30520 456 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 CA8P35219 290 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 LIG4P49917 911 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 GUCY2FP51841 1108 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 KRT17Q04695 432 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 TUSC3Q13454 348 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 NOLC1Q14978 699 aaKnown RBP eCLIP14.84□□□□□ -0.03
SNF8-206ENST00000509989 PTPN14Q15678 1187 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 XKR4Q5GH76 650 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 HERC4Q5GLZ8 1057 aaPredicted RBP14.84□□□□□ -0.03
SNF8-206ENST00000509989 SCARA3Q6AZY7 606 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 MRPL43Q8N983 215 aaKnown RBP14.84□□□□□ -0.03
SNF8-206ENST00000509989 ATXN2LQ8WWM7 1075 aaKnown RBP14.84□□□□□ -0.03
SNF8-206ENST00000509989 ST6GALNAC4Q9H4F1 302 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 MRPL44Q9H9J2 332 aaKnown RBP14.84□□□□□ -0.03
SNF8-206ENST00000509989 KCNH3Q9ULD8 1083 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 COG5Q9UP83 839 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 CUL9Q8IWT3 2517 aa14.84□□□□□ -0.03
SNF8-206ENST00000509989 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.83□□□□□ -0.04
SNF8-206ENST00000509989 GRXCR2A6NFK2 248 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 I3L4J1 428 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 HNRNPDLO14979 420 aaKnown RBP14.83□□□□□ -0.04
SNF8-206ENST00000509989 CLASP2O75122 1294 aaKnown RBP14.83□□□□□ -0.04
SNF8-206ENST00000509989 THP07101 528 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 CTSAP10619 480 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 MATR3P43243 847 aaKnown RBP eCLIP14.83□□□□□ -0.04
SNF8-206ENST00000509989 CLCNKBP51801 687 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 NDUFA8P51970 172 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 TJAP1Q5JTD0 557 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 ADALQ6DHV7 355 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 HACE1Q8IYU2 909 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 EFHBQ8N7U6 833 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 IQUBQ8NA54 791 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 MSLNLQ96KJ4 702 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 ACAP3Q96P50 834 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 CCDC94Q9BW85 323 aaPredicted RBP14.83□□□□□ -0.04
SNF8-206ENST00000509989 TNMDQ9H2S6 317 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 CD320Q9NPF0 282 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 TUBGCP4Q9UGJ1 667 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 PUF60Q9UHX1 559 aaKnown RBP14.83□□□□□ -0.04
SNF8-206ENST00000509989 ZMYM2Q9UBW7 1377 aa14.83□□□□□ -0.04
SNF8-206ENST00000509989 A0A0B4J269 797 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 LACTBL1A8MY62 500 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 CLDN3O15551 220 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 KLRC4O43908 158 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 GCNT3O95395 438 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 EPCAMP16422 314 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 GAP43P17677 238 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 RPL17P18621 184 aaKnown RBP14.82□□□□□ -0.04
SNF8-206ENST00000509989 CMA1P23946 247 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 BRCC3P46736 316 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 ACOT2P49753 483 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 ASIC1P78348 528 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 EHHADHQ08426 723 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 HSP90AA2PQ14568 343 aaPredicted RBP14.82□□□□□ -0.04
SNF8-206ENST00000509989 SMC1AQ14683 1233 aaKnown RBP14.82□□□□□ -0.04
SNF8-206ENST00000509989 ENOX2Q16206 610 aaKnown RBP14.82□□□□□ -0.04
SNF8-206ENST00000509989 LEXMQ3ZCV2 418 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 RTP2Q5QGT7 225 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 KIAA0319Q5VV43 1072 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 FUT10Q6P4F1 479 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 PRSS55Q6UWB4 352 aaPredicted RBP14.82□□□□□ -0.04
SNF8-206ENST00000509989 CRELD2Q6UXH1 353 aaPredicted RBP14.82□□□□□ -0.04
SNF8-206ENST00000509989 PAGE5Q96GU1 130 aa14.82□□□□□ -0.04
SNF8-206ENST00000509989 C7orf25Q9BPX7 421 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms