RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 RXRBP28702 533 aa19.21■□□□□ 0.67
CCHCR1-228ENST00000509552 ABCD1P33897 745 aa19.21■□□□□ 0.67
CCHCR1-228ENST00000509552 SOX10P56693 466 aa19.21■□□□□ 0.67
CCHCR1-228ENST00000509552 PPARDQ03181 441 aa19.21■□□□□ 0.67
CCHCR1-228ENST00000509552 JDP2Q8WYK2 163 aa19.21■□□□□ 0.67
CCHCR1-228ENST00000509552 RNF25Q96BH1 459 aaPredicted RBP19.21■□□□□ 0.67
CCHCR1-228ENST00000509552 FAM213AQ9BRX8 229 aa19.21■□□□□ 0.67
CCHCR1-228ENST00000509552 C1orf112Q9NSG2 853 aa19.21■□□□□ 0.67
CCHCR1-228ENST00000509552 PTPN22Q9Y2R2 807 aa19.21■□□□□ 0.67
CCHCR1-228ENST00000509552 TCRBV7S2A1N4TA0A589 114 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 ZNF862O60290 1169 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 ECEL1O95672 775 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 MAPK4P31152 587 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 RTP1P59025 263 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 EN1Q05925 392 aaPredicted RBP19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 SLC29A2Q14542 456 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 RNF187Q5TA31 235 aaPredicted RBP19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 SWSAP1Q6NVH7 229 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 C12orf50Q8NA57 414 aaPredicted RBP19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 RAPGEF5Q92565 580 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 TLDC2A0PJX2 215 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 ADCY2Q08462 1091 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 CALCOCO2Q13137 446 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 PPP1R7Q15435 360 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 C6orf118Q5T5N4 469 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 CPNE8Q86YQ8 564 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 NSUN6Q8TEA1 469 aaKnown RBP19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 KIAA1586Q9HCI6 787 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 LRRC4CQ9HCJ2 640 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 SEPT9Q9UHD8 586 aaPredicted RBP19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 ANAPC7Q9UJX3 599 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 RIPK3Q9Y572 518 aa19.2■□□□□ 0.66
CCHCR1-228ENST00000509552 RGS16O15492 202 aaPredicted RBP19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 GRIN3BO60391 1043 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 SIX1Q15475 284 aaPredicted RBP19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 ZNF677Q86XU0 584 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 ART4Q93070 314 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 CENPTQ96BT3 561 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 TRIM11Q96F44 468 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 CDHR1Q96JP9 859 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 CAMKK2Q96RR4 588 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 CEP89Q96ST8 783 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 LRRC19Q9H756 370 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 ATP6V0A4Q9HBG4 840 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 KCNG1Q9UIX4 513 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 RARGP13631 454 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 KCNA2P16389 499 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 IFT88Q13099 833 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 WDR44Q5JSH3 913 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 SNRNP48Q6IEG0 339 aaKnown RBP19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 MAIP1Q8WWC4 291 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 PI4K2AQ9BTU6 479 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 STMN4Q9H169 189 aaPredicted RBP19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 SEMA4AQ9H3S1 761 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 EFCC1Q9HA90 598 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 JPH1Q9HDC5 661 aaPredicted RBP19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 ADGRA3Q8IWK6 1321 aa19.19■□□□□ 0.66
CCHCR1-228ENST00000509552 FSCN2O14926 492 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 CLDN3O15551 220 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 MYBL1P10243 752 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 SCP2P22307 547 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 KCNJ1P48048 391 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 BPIFB4P59827 614 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 SGO2Q562F6 1265 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 PSPC1Q8WXF1 523 aaKnown RBP19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 WNK4Q96J92 1243 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 FNBP1Q96RU3 617 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 AVENQ9NQS1 362 aaPredicted RBP19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 PDLIM7Q9NR12 457 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 CYP26B1Q9NR63 512 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 SLC9A2Q9UBY0 812 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 DDX20Q9UHI6 824 aaKnown RBP19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 PCDHB2Q9Y5E7 798 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 H0YHG0 523 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 EXTL3O43909 919 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 FSBPO95073 299 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 STBD1O95210 358 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 LIG4P49917 911 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 BACE1P56817 501 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 ELMO3Q96BJ8 720 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 AS3MTQ9HBK9 375 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 CAPN7Q9Y6W3 813 aa19.18■□□□□ 0.66
CCHCR1-228ENST00000509552 FER1L6Q2WGJ9 1857 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 AGTP01019 485 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 UNGP13051 313 aaPredicted RBP19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 SLC1A1P43005 524 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 ZNF280AP59817 542 aaPredicted RBP19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 PRKCEQ02156 737 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 SP4Q02446 784 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 CPLX4Q7Z7G2 160 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 MCOLN2Q8IZK6 566 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 TMEM109Q9BVC6 243 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 POLR3FQ9H1D9 316 aaPredicted RBP19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 AZI2Q9H6S1 392 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 XPNPEP1Q9NQW7 623 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 ARHGAP28Q9P2N2 729 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 NFASCO94856 1347 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 SMIM23A6NLE4 172 aa19.17■□□□□ 0.66
CCHCR1-228ENST00000509552 RIPK2O43353 540 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms