RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 MFSD1Q9H3U5 465 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.89□□□□□ -0.19
KDM3B-206ENST00000509468 TOPORSQ9NS56 1045 aaPredicted RBP13.89□□□□□ -0.19
KDM3B-206ENST00000509468 USP20Q9Y2K6 914 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 WDFY4Q6ZS81 3184 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 TRIP11Q15643 1979 aa13.89□□□□□ -0.19
KDM3B-206ENST00000509468 TRAPPC3O43617 180 aa13.88□□□□□ -0.19
KDM3B-206ENST00000509468 ZMYND10O75800 440 aa13.88□□□□□ -0.19
KDM3B-206ENST00000509468 TCF15Q12870 199 aa13.88□□□□□ -0.19
KDM3B-206ENST00000509468 NAB2Q15742 525 aa13.88□□□□□ -0.19
KDM3B-206ENST00000509468 RTP2Q5QGT7 225 aa13.88□□□□□ -0.19
KDM3B-206ENST00000509468 ASTLQ6HA08 431 aaPredicted RBP13.88□□□□□ -0.19
KDM3B-206ENST00000509468 RINT1Q6NUQ1 792 aa13.88□□□□□ -0.19
KDM3B-206ENST00000509468 PRSS55Q6UWB4 352 aaPredicted RBP13.88□□□□□ -0.19
KDM3B-206ENST00000509468 C1orf186Q6ZWK4 172 aa13.88□□□□□ -0.19
KDM3B-206ENST00000509468 RTL10Q7L3V2 364 aa13.88□□□□□ -0.19
KDM3B-206ENST00000509468 GLYCTKQ8IVS8 523 aa13.88□□□□□ -0.19
KDM3B-206ENST00000509468 LNX1Q8TBB1 728 aaPredicted RBP13.88□□□□□ -0.19
KDM3B-206ENST00000509468 DDX27Q96GQ7 796 aaKnown RBP13.88□□□□□ -0.19
KDM3B-206ENST00000509468 TMX3Q96JJ7 454 aa13.88□□□□□ -0.19
KDM3B-206ENST00000509468 ACO2Q99798 780 aaKnown RBP13.88□□□□□ -0.19
KDM3B-206ENST00000509468 CLSTN3Q9BQT9 956 aa13.88□□□□□ -0.19
KDM3B-206ENST00000509468 TCHPQ9BT92 498 aa13.88□□□□□ -0.19
KDM3B-206ENST00000509468 KIFC3Q9BVG8 833 aa13.88□□□□□ -0.19
KDM3B-206ENST00000509468 CCDC94Q9BW85 323 aaPredicted RBP13.88□□□□□ -0.19
KDM3B-206ENST00000509468 KMT5AQ9NQR1 393 aa13.88□□□□□ -0.19
KDM3B-206ENST00000509468 SLC38A7Q9NVC3 462 aa13.88□□□□□ -0.19
KDM3B-206ENST00000509468 ZFP37Q9Y6Q3 630 aaPredicted RBP13.88□□□□□ -0.19
KDM3B-206ENST00000509468 CLUHO75153 1309 aa13.88□□□□□ -0.19
KDM3B-206ENST00000509468 MYH11P35749 1972 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 TMEM189-UBE2V1I3L0A0 370 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 HIP1RO75146 1068 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 B3GAT3O94766 335 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 KIF4AO95239 1232 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 PDGFBP01127 241 aaPredicted RBP13.87□□□□□ -0.19
KDM3B-206ENST00000509468 EDN1P05305 212 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 HNRNPA1P09651 372 aaKnown RBP eCLIP13.87□□□□□ -0.19
KDM3B-206ENST00000509468 MYBP10242 640 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 RPL17P18621 184 aaKnown RBP13.87□□□□□ -0.19
KDM3B-206ENST00000509468 GUCY2CP25092 1073 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 CDC25AP30304 524 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 GRM5P41594 1212 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 SMTNP53814 917 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 PSMD5Q16401 504 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 UVSSAQ2YD98 709 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 ARL6IP4Q66PJ3 421 aaKnown RBP13.87□□□□□ -0.19
KDM3B-206ENST00000509468 FEZF2Q8TBJ5 459 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 HASPINQ8TF76 798 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 ZNF707Q96C28 371 aaPredicted RBP13.87□□□□□ -0.19
KDM3B-206ENST00000509468 PPP1R10Q96QC0 940 aaKnown RBP13.87□□□□□ -0.19
KDM3B-206ENST00000509468 PTPRHQ9HD43 1115 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 KCND2Q9NZV8 630 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 EPS15L1Q9UBC2 864 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 CACNG4Q9UBN1 327 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 DUSP12Q9UNI6 340 aa13.87□□□□□ -0.19
KDM3B-206ENST00000509468 SMIM28A0A1B0GU29 152 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 PP2D1A8MPX8 630 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 MCF2P10911 925 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 LAMP2P13473 410 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 GJB2P29033 226 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 CLCNKBP51801 687 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 ATP2C1P98194 919 aaPredicted RBP13.86□□□□□ -0.19
KDM3B-206ENST00000509468 STRN3Q13033 797 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 RAB33AQ14088 237 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 ZRSR1Q15695 479 aaKnown RBP13.86□□□□□ -0.19
KDM3B-206ENST00000509468 UPP1Q16831 310 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 PPM1LQ5SGD2 360 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 HYIQ5T013 277 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 LIN9Q5TKA1 542 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 ALKAL1Q6UXT8 129 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.86□□□□□ -0.19
KDM3B-206ENST00000509468 SYT2Q8N9I0 419 aaPredicted RBP13.86□□□□□ -0.19
KDM3B-206ENST00000509468 ATOH1Q92858 354 aaPredicted RBP13.86□□□□□ -0.19
KDM3B-206ENST00000509468 CDK5RAP3Q96JB5 506 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 ACAP3Q96P50 834 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 MMTAG2Q9BU76 263 aaKnown RBP13.86□□□□□ -0.19
KDM3B-206ENST00000509468 CXCL16Q9H2A7 254 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 SMOC2Q9H3U7 446 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 ARHGAP28Q9P2N2 729 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 WNT16Q9UBV4 365 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 FBXL21Q9UKT6 434 aa13.86□□□□□ -0.19
KDM3B-206ENST00000509468 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.86□□□□□ -0.19
KDM3B-206ENST00000509468 SFI1A8K8P3 1242 aa13.85□□□□□ -0.19
KDM3B-206ENST00000509468 SLC26A4O43511 780 aa13.85□□□□□ -0.19
KDM3B-206ENST00000509468 GALR2O43603 387 aaPredicted RBP13.85□□□□□ -0.19
KDM3B-206ENST00000509468 N4BP1O75113 896 aaKnown RBP13.85□□□□□ -0.19
KDM3B-206ENST00000509468 FGFR3P22607 806 aa13.85□□□□□ -0.19
KDM3B-206ENST00000509468 HOXA9P31269 272 aa13.85□□□□□ -0.19
KDM3B-206ENST00000509468 ZNF568Q3ZCX4 644 aa13.85□□□□□ -0.19
KDM3B-206ENST00000509468 XKR4Q5GH76 650 aa13.85□□□□□ -0.19
KDM3B-206ENST00000509468 LARP1BQ659C4 914 aaKnown RBP13.85□□□□□ -0.19
KDM3B-206ENST00000509468 DAW1Q8N136 415 aa13.85□□□□□ -0.19
KDM3B-206ENST00000509468 SLC44A3Q8N4M1 653 aa13.85□□□□□ -0.19
KDM3B-206ENST00000509468 SPIRE2Q8WWL2 714 aa13.85□□□□□ -0.19
KDM3B-206ENST00000509468 AK8Q96MA6 479 aa13.85□□□□□ -0.19
KDM3B-206ENST00000509468 RUSC1Q9BVN2 902 aa13.85□□□□□ -0.19
KDM3B-206ENST00000509468 TARS2Q9BW92 718 aaKnown RBP13.85□□□□□ -0.19
KDM3B-206ENST00000509468 FBXW11Q9UKB1 542 aa13.85□□□□□ -0.19
KDM3B-206ENST00000509468 SMC3Q9UQE7 1217 aa13.85□□□□□ -0.19
KDM3B-206ENST00000509468 BACE2Q9Y5Z0 518 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms