RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 ZIM2Q9NZV7 527 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 TRAF3IP3Q9Y228 551 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 TTLL3Q9Y4R7 772 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 PCDHGB3Q9Y5G1 929 aa5.04□□□□□ -1.6
NIPBL-206ENST00000509429 EPN1Q9Y6I3 576 aaPredicted RBP5.04□□□□□ -1.6
NIPBL-206ENST00000509429 ALG1L2C9J202 215 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 J3KRW8 73 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 EIF3FO00303 357 aaPredicted RBP5.03□□□□□ -1.6
NIPBL-206ENST00000509429 RTCAO00442 366 aaKnown RBP5.03□□□□□ -1.6
NIPBL-206ENST00000509429 CASQ2O14958 399 aaPredicted RBP5.03□□□□□ -1.6
NIPBL-206ENST00000509429 ZSCAN9O15535 394 aaPredicted RBP5.03□□□□□ -1.6
NIPBL-206ENST00000509429 ERLIN1O75477 346 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 TADA3O75528 432 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 RASGRP1O95267 797 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 SLC4A1P02730 911 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 CYP1A2P05177 515 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 MTHFD1P11586 935 aaKnown RBP5.03□□□□□ -1.6
NIPBL-206ENST00000509429 TNNT1P13805 278 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 TRIM27P14373 513 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 FERP16591 822 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 DESP17661 470 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 RAD52P43351 418 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 RAB27AP51159 221 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 RAC3P60763 192 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 AP2B1P63010 937 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 TBX2Q13207 712 aaPredicted RBP5.03□□□□□ -1.6
NIPBL-206ENST00000509429 PRKG2Q13237 762 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 TNNI3KQ59H18 835 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 DALRD3Q5D0E6 543 aaKnown RBP5.03□□□□□ -1.6
NIPBL-206ENST00000509429 METTL24Q5JXM2 366 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 CCDC30Q5VVM6 783 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 MTHFD1LQ6UB35 978 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 NLRC3Q7RTR2 1065 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 SDCCAG8Q86SQ7 713 aaPredicted RBP5.03□□□□□ -1.6
NIPBL-206ENST00000509429 TMEM110Q86TL2 294 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 HOMER1Q86YM7 354 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 VPS52Q8N1B4 723 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 RABGGTAQ92696 567 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 AJUBAQ96IF1 538 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 CLMNQ96JQ2 1002 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 ZMAT2Q96NC0 199 aaKnown RBP5.03□□□□□ -1.6
NIPBL-206ENST00000509429 DEPDC7Q96QD5 511 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 STRBPQ96SI9 672 aaKnown RBP5.03□□□□□ -1.6
NIPBL-206ENST00000509429 SH3GL3Q99963 347 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 NOC4LQ9BVI4 516 aaKnown RBP5.03□□□□□ -1.6
NIPBL-206ENST00000509429 SLC13A1Q9BZW2 595 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 KCNQ5Q9NR82 932 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 AIPL1Q9NZN9 384 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 SIRPGQ9P1W8 387 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 ARHGAP28Q9P2N2 729 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 SF3B6Q9Y3B4 125 aaKnown RBP5.03□□□□□ -1.6
NIPBL-206ENST00000509429 MRPL11Q9Y3B7 192 aaKnown RBP5.03□□□□□ -1.6
NIPBL-206ENST00000509429 PCDHGB7Q9Y5F8 929 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 V9GYY5 206 aaPredicted RBP5.03□□□□□ -1.6
NIPBL-206ENST00000509429 TIAM1Q13009 1591 aa5.03□□□□□ -1.6
NIPBL-206ENST00000509429 KIF2AO00139 706 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-206ENST00000509429 PLOD2O00469 737 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 ELL2O00472 640 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-206ENST00000509429 P4HA2O15460 535 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 AKAP10O43572 662 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 ZBED4O75132 1171 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 CYP17A1P05093 508 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 GNAT2P19087 354 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 CYP11B2P19099 503 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 TRIM21P19474 475 aaKnown RBP5.02□□□□□ -1.61
NIPBL-206ENST00000509429 GALNSP34059 522 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 ITGAEP38570 1179 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 CD86P42081 329 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 SKIV2L2P42285 1042 aaKnown RBP5.02□□□□□ -1.61
NIPBL-206ENST00000509429 MATR3P43243 847 aaKnown RBP eCLIP5.02□□□□□ -1.61
NIPBL-206ENST00000509429 NASPP49321 788 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-206ENST00000509429 RENBPP51606 427 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 RPS6KA3P51812 740 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 LIMK1P53667 647 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 ZNF445P59923 1031 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 RACK1P63244 317 aaKnown RBP5.02□□□□□ -1.61
NIPBL-206ENST00000509429 GABPB1Q06547 395 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-206ENST00000509429 SP140Q13342 867 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 SYCP1Q15431 976 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 GNPTABQ3T906 1256 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 CAVIN4Q5BKX8 364 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 NXNQ6DKJ4 435 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 BTNL9Q6UXG8 535 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 CEP68Q76N32 757 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 EEPD1Q7L9B9 569 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 TMC4Q7Z404 712 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 GALNT5Q7Z7M9 940 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 VPS37DQ86XT2 251 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 TCEAL8Q8IYN2 117 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 ZNF654Q8IZM8 581 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 LRRC43Q8N309 656 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 AFAP1Q8N556 730 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 IL17REQ8NFR9 667 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 TNIP2Q8NFZ5 429 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 PLEKHO2Q8TD55 490 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 ZNF606Q8WXB4 792 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 FRAT1Q92837 279 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-206ENST00000509429 BRF1Q92994 677 aa5.02□□□□□ -1.61
NIPBL-206ENST00000509429 RBM18Q96H35 190 aaKnown RBP5.02□□□□□ -1.61
NIPBL-206ENST00000509429 C8orf76Q96K31 380 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms