RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 FBXO4Q9UKT5 387 aa17.72■□□□□ 0.43
CXCL1-202ENST00000509101 PTGESO14684 152 aa17.71■□□□□ 0.43
CXCL1-202ENST00000509101 SPTLC1O15269 473 aa17.71■□□□□ 0.43
CXCL1-202ENST00000509101 CDKL5O76039 1030 aa17.71■□□□□ 0.43
CXCL1-202ENST00000509101 LYPLA2O95372 231 aa17.71■□□□□ 0.43
CXCL1-202ENST00000509101 CD72P21854 359 aa17.71■□□□□ 0.43
CXCL1-202ENST00000509101 HOXA9P31269 272 aa17.71■□□□□ 0.43
CXCL1-202ENST00000509101 RARRES1P49788 294 aa17.71■□□□□ 0.43
CXCL1-202ENST00000509101 CSTF1Q05048 431 aaKnown RBP17.71■□□□□ 0.43
CXCL1-202ENST00000509101 ZNF528Q3MIS6 628 aa17.71■□□□□ 0.43
CXCL1-202ENST00000509101 PIGOQ8TEQ8 1089 aa17.71■□□□□ 0.43
CXCL1-202ENST00000509101 ING5Q8WYH8 240 aa17.71■□□□□ 0.43
CXCL1-202ENST00000509101 LTB4R2Q9NPC1 389 aa17.71■□□□□ 0.43
CXCL1-202ENST00000509101 GPRC5CQ9NQ84 441 aa17.71■□□□□ 0.43
CXCL1-202ENST00000509101 STK36Q9NRP7 1315 aa17.71■□□□□ 0.42
CXCL1-202ENST00000509101 FAM170BA6NMN3 283 aa17.7■□□□□ 0.42
CXCL1-202ENST00000509101 PFKPQ01813 784 aa17.7■□□□□ 0.42
CXCL1-202ENST00000509101 SCRN1Q12765 414 aa17.7■□□□□ 0.42
CXCL1-202ENST00000509101 VARS2Q5ST30 1063 aaKnown RBP17.7■□□□□ 0.42
CXCL1-202ENST00000509101 MAEAQ7L5Y9 396 aa17.7■□□□□ 0.42
CXCL1-202ENST00000509101 NPAS3Q8IXF0 933 aa17.7■□□□□ 0.42
CXCL1-202ENST00000509101 HSD17B14Q9BPX1 270 aa17.7■□□□□ 0.42
CXCL1-202ENST00000509101 CXCL16Q9H2A7 254 aa17.7■□□□□ 0.42
CXCL1-202ENST00000509101 PRMT7Q9NVM4 692 aaPredicted RBP17.7■□□□□ 0.42
CXCL1-202ENST00000509101 SNTG2Q9NY99 539 aa17.7■□□□□ 0.42
CXCL1-202ENST00000509101 TPRP12270 2363 aaKnown RBP17.7■□□□□ 0.42
CXCL1-202ENST00000509101 TICRRQ7Z2Z1 1910 aa17.7■□□□□ 0.42
CXCL1-202ENST00000509101 KMT2BQ9UMN6 2715 aaPredicted RBP17.7■□□□□ 0.42
CXCL1-202ENST00000509101 A0A087WWV3 80 aa17.69■□□□□ 0.42
CXCL1-202ENST00000509101 TTLL13PA6NNM8 815 aa17.69■□□□□ 0.42
CXCL1-202ENST00000509101 RECQL4O94761 1208 aa17.69■□□□□ 0.42
CXCL1-202ENST00000509101 THP07101 528 aa17.69■□□□□ 0.42
CXCL1-202ENST00000509101 TARSP26639 723 aaKnown RBP17.69■□□□□ 0.42
CXCL1-202ENST00000509101 NR5A1Q13285 461 aa17.69■□□□□ 0.42
CXCL1-202ENST00000509101 TMEM132AQ24JP5 1023 aa17.69■□□□□ 0.42
CXCL1-202ENST00000509101 PABPC1LQ4VXU2 614 aaKnown RBP17.69■□□□□ 0.42
CXCL1-202ENST00000509101 AXDND1Q5T1B0 1012 aaPredicted RBP17.69■□□□□ 0.42
CXCL1-202ENST00000509101 PPP4R3CPQ6ZMV5 832 aa17.69■□□□□ 0.42
CXCL1-202ENST00000509101 TPRG1Q6ZUI0 275 aa17.69■□□□□ 0.42
CXCL1-202ENST00000509101 PRIMPOLQ96LW4 560 aa17.69■□□□□ 0.42
CXCL1-202ENST00000509101 OSBPL6Q9BZF3 934 aa17.69■□□□□ 0.42
CXCL1-202ENST00000509101 PDZD7Q9H5P4 517 aa17.69■□□□□ 0.42
CXCL1-202ENST00000509101 PDRG1Q9NUG6 133 aa17.69■□□□□ 0.42
CXCL1-202ENST00000509101 PCDHA12Q9UN75 941 aa17.69■□□□□ 0.42
CXCL1-202ENST00000509101 SMG5Q9UPR3 1016 aaKnown RBP17.69■□□□□ 0.42
CXCL1-202ENST00000509101 PCDHGA2Q9Y5H1 932 aa17.69■□□□□ 0.42
CXCL1-202ENST00000509101 COL4A2P08572 1712 aa17.69■□□□□ 0.42
CXCL1-202ENST00000509101 N4BP3O15049 544 aa17.68■□□□□ 0.42
CXCL1-202ENST00000509101 OR1D2P34982 312 aa17.68■□□□□ 0.42
CXCL1-202ENST00000509101 MAGEA9P43362 315 aa17.68■□□□□ 0.42
CXCL1-202ENST00000509101 ELAVL2Q12926 359 aaKnown RBP17.68■□□□□ 0.42
CXCL1-202ENST00000509101 NAB2Q15742 525 aa17.68■□□□□ 0.42
CXCL1-202ENST00000509101 CALCRLQ16602 461 aa17.68■□□□□ 0.42
CXCL1-202ENST00000509101 CDCA2Q69YH5 1023 aaPredicted RBP17.68■□□□□ 0.42
CXCL1-202ENST00000509101 PDXDC1Q6P996 788 aa17.68■□□□□ 0.42
CXCL1-202ENST00000509101 RSPO2Q6UXX9 243 aaPredicted RBP17.68■□□□□ 0.42
CXCL1-202ENST00000509101 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.68■□□□□ 0.42
CXCL1-202ENST00000509101 ZBTB8OSQ8IWT0 167 aa17.68■□□□□ 0.42
CXCL1-202ENST00000509101 ATRIPQ8WXE1 791 aa17.68■□□□□ 0.42
CXCL1-202ENST00000509101 DNMT3BQ9UBC3 853 aaKnown RBP17.68■□□□□ 0.42
CXCL1-202ENST00000509101 ACACBO00763 2458 aa17.67■□□□□ 0.42
CXCL1-202ENST00000509101 POU2F2P09086 479 aa17.67■□□□□ 0.42
CXCL1-202ENST00000509101 KRT2P35908 639 aa17.67■□□□□ 0.42
CXCL1-202ENST00000509101 RAB33AQ14088 237 aa17.67■□□□□ 0.42
CXCL1-202ENST00000509101 ZBTB41Q5SVQ8 909 aa17.67■□□□□ 0.42
CXCL1-202ENST00000509101 TSSK4Q6SA08 328 aa17.67■□□□□ 0.42
CXCL1-202ENST00000509101 NOSTRINQ8IVI9 506 aa17.67■□□□□ 0.42
CXCL1-202ENST00000509101 CNTNAP3BQ96NU0 1288 aa17.67■□□□□ 0.42
CXCL1-202ENST00000509101 CNTNAP3Q9BZ76 1288 aa17.67■□□□□ 0.42
CXCL1-202ENST00000509101 TM6SF1Q9BZW5 370 aa17.67■□□□□ 0.42
CXCL1-202ENST00000509101 TTC12Q9H892 705 aaPredicted RBP17.67■□□□□ 0.42
CXCL1-202ENST00000509101 USP20Q9Y2K6 914 aa17.67■□□□□ 0.42
CXCL1-202ENST00000509101 MRPS23Q9Y3D9 190 aaKnown RBP17.67■□□□□ 0.42
CXCL1-202ENST00000509101 CDY1Q9Y6F8 540 aa17.67■□□□□ 0.42
CXCL1-202ENST00000509101 LIG1P18858 919 aa17.66■□□□□ 0.42
CXCL1-202ENST00000509101 TXKP42681 527 aa17.66■□□□□ 0.42
CXCL1-202ENST00000509101 FAM187BQ17R55 369 aa17.66■□□□□ 0.42
CXCL1-202ENST00000509101 SLC5A9Q2M3M2 681 aa17.66■□□□□ 0.42
CXCL1-202ENST00000509101 GLRA4Q5JXX5 417 aa17.66■□□□□ 0.42
CXCL1-202ENST00000509101 ZBTB44Q8NCP5 570 aa17.66■□□□□ 0.42
CXCL1-202ENST00000509101 TNFRSF25Q93038 417 aa17.66■□□□□ 0.42
CXCL1-202ENST00000509101 MCRS1Q96EZ8 462 aa17.66■□□□□ 0.42
CXCL1-202ENST00000509101 FZD8Q9H461 694 aa17.66■□□□□ 0.42
CXCL1-202ENST00000509101 HEBP1Q9NRV9 189 aa17.66■□□□□ 0.42
CXCL1-202ENST00000509101 ZSCAN32Q9NX65 697 aa17.66■□□□□ 0.42
CXCL1-202ENST00000509101 ORC3Q9UBD5 711 aaPredicted RBP17.66■□□□□ 0.42
CXCL1-202ENST00000509101 MTRRQ9UBK8 725 aa17.66■□□□□ 0.42
CXCL1-202ENST00000509101 KCNH3Q9ULD8 1083 aa17.66■□□□□ 0.42
CXCL1-202ENST00000509101 GDAQ9Y2T3 454 aa17.66■□□□□ 0.42
CXCL1-202ENST00000509101 PDCD11Q14690 1871 aaKnown RBP17.66■□□□□ 0.42
CXCL1-202ENST00000509101 WNT7AO00755 349 aa17.65■□□□□ 0.42
CXCL1-202ENST00000509101 NEMFO60524 1076 aa17.65■□□□□ 0.42
CXCL1-202ENST00000509101 EDN1P05305 212 aa17.65■□□□□ 0.42
CXCL1-202ENST00000509101 PRKCBP05771 671 aa17.65■□□□□ 0.42
CXCL1-202ENST00000509101 FGFR3P22607 806 aa17.65■□□□□ 0.42
CXCL1-202ENST00000509101 IGFBP6P24592 240 aaPredicted RBP17.65■□□□□ 0.42
CXCL1-202ENST00000509101 PRPF4BQ13523 1007 aaKnown RBP17.65■□□□□ 0.42
CXCL1-202ENST00000509101 UVSSAQ2YD98 709 aa17.65■□□□□ 0.42
CXCL1-202ENST00000509101 EEF1DP3Q658K8 133 aa17.65■□□□□ 0.42
CXCL1-202ENST00000509101 MCPH1Q8NEM0 835 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms