RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 DUSP26Q9BV47 211 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 TARS2Q9BW92 718 aaKnown RBP3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 C1QTNF7Q9BXJ2 289 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 ANO3Q9BYT9 981 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 ZSWIM4Q9H7M6 989 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 METTL14Q9HCE5 456 aaKnown RBP3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 EMC7Q9NPA0 242 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 FPGT-TNNI3KV9GXZ4 949 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 MAST3O60307 1309 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 CGB1A6NKQ9 187 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 DRGXA6NNA5 263 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 KDM1AO60341 852 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 FKBP9O95302 570 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 ELANEP08246 267 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 SPATA31D3P0C874 917 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 CRHR1P34998 444 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 FLT3LGP49771 235 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 SIM1P81133 766 aaPredicted RBP3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 OCRLQ01968 901 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 PRAMEF14Q5SWL7 426 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 BROXQ5VW32 411 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 CNNM4Q6P4Q7 775 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 SPATA31D4Q6ZUB0 917 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 FKBP9P1Q75LS8 142 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 PPM1KQ8N3J5 372 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 SLC35B2Q8TB61 432 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 TFAP2CQ92754 450 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 TMX1Q9H3N1 280 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 PIF1Q9H611 641 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 SEMA4GQ9NTN9 838 aa3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 USP15Q9Y4E8 981 aaPredicted RBP3.26□□□□□ -1.89
DEPDC1B-204ENST00000509006 ATRNL1Q5VV63 1379 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 PNPLA7Q6ZV29 1317 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 PJA2O43164 708 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 ADCY6O43306 1168 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 HLA-DOAP06340 250 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 LPLP06858 475 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 SCNN1BP51168 640 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 CHN2P52757 468 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 RESTQ13127 1097 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 ZNF169Q14929 603 aaPredicted RBP3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 PDCD1Q15116 288 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 MST1LQ2TV78 715 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 CCDC144BQ3MJ40 725 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 FAM47AQ5JRC9 791 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 CCDC181Q5TID7 509 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 B3GNTL1Q67FW5 361 aaPredicted RBP3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 ARMC6Q6NXE6 501 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 C16orf86Q6ZW13 317 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 GPR149Q86SP6 731 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 HOMER1Q86YM7 354 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 RHOT2Q8IXI1 618 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 NIM1KQ8IY84 436 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 FAM9AQ8IZU1 332 aaPredicted RBP3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 SH2D3CQ8N5H7 860 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 ZFP28Q8NHY6 868 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 ZNF480Q8WV37 535 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 SLC9A6Q92581 669 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 SLC5A5Q92911 643 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 BRIP1Q9BX63 1249 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 KCTD10Q9H3F6 313 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 KLHL11Q9NVR0 708 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 RNF181Q9P0P0 153 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 POGKQ9P215 609 aa3.25□□□□□ -1.89
DEPDC1B-204ENST00000509006 TLDC2A0PJX2 215 aa3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 CXorf49A8MYA2 514 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 CDKL5O76039 1030 aa3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 ALOX15P16050 662 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 LGALS4P56470 323 aa3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 IGBP1P78318 339 aa3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 SRSF4Q08170 494 aaKnown RBP3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 DDB1Q16531 1140 aa3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 DALRD3Q5D0E6 543 aaKnown RBP3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 CT83Q5H943 113 aa3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 RNF187Q5TA31 235 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 PDZD4Q76G19 769 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 ZNF572Q7Z3I7 529 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 RASSF3Q86WH2 238 aa3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 DHX37Q8IY37 1157 aaKnown RBP3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 TRMT2AQ8IZ69 625 aaKnown RBP3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 OR56A1Q8NGH5 318 aa3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 OR2W6PQ8NHA6 318 aa3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 PSMD1Q99460 953 aa3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 FANCLQ9NW38 375 aa3.24□□□□□ -1.89
DEPDC1B-204ENST00000509006 RPTORQ8N122 1335 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 hCG_2014768A0A024R1R8 64 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 GSG1L2A8MUP6 293 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 BPIP17213 487 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 POU3F3P20264 500 aaPredicted RBP3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 FDXRP22570 491 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 PROK1P58294 105 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 CLRN1P58418 232 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 ANAPC15P60006 121 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 IL2P60568 153 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 OCA2Q04671 838 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 SART3Q15020 963 aaKnown RBP3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 GPR162Q16538 588 aa3.23□□□□□ -1.89
DEPDC1B-204ENST00000509006 TAF7LQ5H9L4 462 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms