RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 DDX23Q9BUQ8 820 aaKnown RBP11.07□□□□□ -0.64
SH3D21-206ENST00000508854 MRPS17Q9Y2R5 130 aaKnown RBP11.07□□□□□ -0.64
SH3D21-206ENST00000508854 PCDHGA2Q9Y5H1 932 aa11.07□□□□□ -0.64
SH3D21-206ENST00000508854 FAM170BA6NMN3 283 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 NEMFO60524 1076 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 PFKFB2O60825 505 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 RBM25P49756 843 aaKnown RBP11.06□□□□□ -0.64
SH3D21-206ENST00000508854 PRPF4BQ13523 1007 aaKnown RBP11.06□□□□□ -0.64
SH3D21-206ENST00000508854 RAB33AQ14088 237 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 TRIM29Q14134 588 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 UBXN2BQ14CS0 331 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 PPP2R5AQ15172 486 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 VARS2Q5ST30 1063 aaKnown RBP11.06□□□□□ -0.64
SH3D21-206ENST00000508854 ZBTB41Q5SVQ8 909 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 AXDND1Q5T1B0 1012 aaPredicted RBP11.06□□□□□ -0.64
SH3D21-206ENST00000508854 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.06□□□□□ -0.64
SH3D21-206ENST00000508854 UROC1Q96N76 676 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 NACC1Q96RE7 527 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 LARP6Q9BRS8 491 aaKnown RBP11.06□□□□□ -0.64
SH3D21-206ENST00000508854 FOXQ1Q9C009 403 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 FZD8Q9H461 694 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 TUFT1Q9NNX1 390 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 RTN4Q9NQC3 1192 aaKnown RBP11.06□□□□□ -0.64
SH3D21-206ENST00000508854 DLL3Q9NYJ7 618 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 GDE1Q9NZC3 331 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 NCDNQ9UBB6 729 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 ORC3Q9UBD5 711 aaPredicted RBP11.06□□□□□ -0.64
SH3D21-206ENST00000508854 FANCMQ8IYD8 2048 aa11.06□□□□□ -0.64
SH3D21-206ENST00000508854 MIA3Q5JRA6 1907 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 CASTOR2A6NHX0 329 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 PRR5-ARHGAP8B1AHC4 643 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 TMEM189-UBE2V1I3L0A0 370 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 CCL16O15467 120 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 USO1O60763 962 aaKnown RBP11.05□□□□□ -0.64
SH3D21-206ENST00000508854 ECI2O75521 394 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 KIF4AO95239 1232 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 ATP2B1P20020 1258 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 TXKP42681 527 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 ARHGAP8P85298 464 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 PPP2R5DQ14738 602 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 DCAF4L1Q3SXM0 396 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 PABPC1LQ4VXU2 614 aaKnown RBP11.05□□□□□ -0.64
SH3D21-206ENST00000508854 CDCA2Q69YH5 1023 aaPredicted RBP11.05□□□□□ -0.64
SH3D21-206ENST00000508854 ZNF852Q6ZMS4 543 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 ANKS3Q6ZW76 656 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 CDR2LQ86X02 465 aaPredicted RBP11.05□□□□□ -0.64
SH3D21-206ENST00000508854 SUMF1Q8NBK3 374 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 DEPTORQ8TB45 409 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 SLC7A14Q8TBB6 771 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 OXER1Q8TDS5 423 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 PIGOQ8TEQ8 1089 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 RABGGTAQ92696 567 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 FAM126AQ9BYI3 521 aaPredicted RBP11.05□□□□□ -0.64
SH3D21-206ENST00000508854 ZSCAN32Q9NX65 697 aa11.05□□□□□ -0.64
SH3D21-206ENST00000508854 MRPS23Q9Y3D9 190 aaKnown RBP11.05□□□□□ -0.64
SH3D21-206ENST00000508854 MYH15Q9Y2K3 1946 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 ACKR2O00590 384 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 TBC1D4O60343 1298 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 RECQL4O94761 1208 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 B3GAT3O94766 335 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 GLULP15104 373 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 FGFR3P22607 806 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 ELF1P32519 619 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 OR1D2P34982 312 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 NAMPTP43490 491 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 RPS9P46781 194 aaKnown RBP11.04□□□□□ -0.64
SH3D21-206ENST00000508854 EFNA5P52803 228 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 NRLP54845 237 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 CSTF1Q05048 431 aaKnown RBP11.04□□□□□ -0.64
SH3D21-206ENST00000508854 NR5A1Q13285 461 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 POTEGQ6S5H5 508 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 MAEAQ7L5Y9 396 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 MAML2Q8IZL2 1156 aaPredicted RBP11.04□□□□□ -0.64
SH3D21-206ENST00000508854 ERMNQ8TAM6 284 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 ITFG1Q8TB96 612 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 HASPINQ8TF76 798 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 IFT74Q96LB3 600 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 PAAF1Q9BRP4 392 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 IER2Q9BTL4 223 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 RPP25Q9BUL9 199 aaKnown RBP11.04□□□□□ -0.64
SH3D21-206ENST00000508854 PDZD7Q9H5P4 517 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 LTB4R2Q9NPC1 389 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 AVENQ9NQS1 362 aaPredicted RBP11.04□□□□□ -0.64
SH3D21-206ENST00000508854 SNTG2Q9NY99 539 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 MTRRQ9UBK8 725 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 BACE2Q9Y5Z0 518 aa11.04□□□□□ -0.64
SH3D21-206ENST00000508854 CACNA1IQ9P0X4 2223 aa11.03□□□□□ -0.64
SH3D21-206ENST00000508854 MED19A0JLT2 244 aaPredicted RBP11.03□□□□□ -0.64
SH3D21-206ENST00000508854 ARHGEF35A5YM69 484 aa11.03□□□□□ -0.64
SH3D21-206ENST00000508854 POTEMA6NI47 508 aa11.03□□□□□ -0.64
SH3D21-206ENST00000508854 MAN2B1O00754 1011 aa11.03□□□□□ -0.64
SH3D21-206ENST00000508854 PTGESO14684 152 aa11.03□□□□□ -0.64
SH3D21-206ENST00000508854 ZNF197O14709 1029 aa11.03□□□□□ -0.64
SH3D21-206ENST00000508854 LRG1P02750 347 aa11.03□□□□□ -0.64
SH3D21-206ENST00000508854 PRKCBP05771 671 aa11.03□□□□□ -0.64
SH3D21-206ENST00000508854 PTPN2P17706 415 aa11.03□□□□□ -0.64
SH3D21-206ENST00000508854 MUTP22033 750 aa11.03□□□□□ -0.64
SH3D21-206ENST00000508854 NTHL1P78549 312 aa11.03□□□□□ -0.64
SH3D21-206ENST00000508854 LMNB2Q03252 620 aa11.03□□□□□ -0.64
SH3D21-206ENST00000508854 RSPO4Q2I0M5 234 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms