RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 LIMD1Q9UGP4 676 aa17.84■□□□□ 0.45
LMNA-222ENST00000508500 USTQ9Y2C2 406 aa17.84■□□□□ 0.45
LMNA-222ENST00000508500 PHLPP2Q6ZVD8 1323 aa17.83■□□□□ 0.44
LMNA-222ENST00000508500 CCDC195A0A1B0GUA6 201 aa17.83■□□□□ 0.44
LMNA-222ENST00000508500 TGM5O43548 720 aa17.83■□□□□ 0.44
LMNA-222ENST00000508500 GLUD1P00367 558 aa17.83■□□□□ 0.44
LMNA-222ENST00000508500 PTPN5P54829 565 aa17.83■□□□□ 0.44
LMNA-222ENST00000508500 SLC12A3P55017 1021 aa17.83■□□□□ 0.44
LMNA-222ENST00000508500 ZRSR1Q15695 479 aaKnown RBP17.83■□□□□ 0.44
LMNA-222ENST00000508500 DCAF4L1Q3SXM0 396 aa17.83■□□□□ 0.44
LMNA-222ENST00000508500 SYT2Q8N9I0 419 aaPredicted RBP17.83■□□□□ 0.44
LMNA-222ENST00000508500 TDRD5Q8NAT2 981 aaKnown RBP17.83■□□□□ 0.44
LMNA-222ENST00000508500 LNX1Q8TBB1 728 aaPredicted RBP17.83■□□□□ 0.44
LMNA-222ENST00000508500 ZNF707Q96C28 371 aaPredicted RBP17.83■□□□□ 0.44
LMNA-222ENST00000508500 TARS2Q9BW92 718 aaKnown RBP17.83■□□□□ 0.44
LMNA-222ENST00000508500 CDT1Q9H211 546 aa17.83■□□□□ 0.44
LMNA-222ENST00000508500 SORCS3Q9UPU3 1222 aa17.83■□□□□ 0.44
LMNA-222ENST00000508500 SMC3Q9UQE7 1217 aa17.83■□□□□ 0.44
LMNA-222ENST00000508500 H3BQV1 296 aa17.82■□□□□ 0.44
LMNA-222ENST00000508500 PROZP22891 400 aa17.82■□□□□ 0.44
LMNA-222ENST00000508500 GUCY2CP25092 1073 aa17.82■□□□□ 0.44
LMNA-222ENST00000508500 MCM2P49736 904 aa17.82■□□□□ 0.44
LMNA-222ENST00000508500 GRIN1Q05586 938 aa17.82■□□□□ 0.44
LMNA-222ENST00000508500 SOX4Q06945 474 aaPredicted RBP17.82■□□□□ 0.44
LMNA-222ENST00000508500 RAD51AP2Q09MP3 1159 aa17.82■□□□□ 0.44
LMNA-222ENST00000508500 TMEM119Q4V9L6 283 aa17.82■□□□□ 0.44
LMNA-222ENST00000508500 XKR4Q5GH76 650 aa17.82■□□□□ 0.44
LMNA-222ENST00000508500 LARP1BQ659C4 914 aaKnown RBP17.82■□□□□ 0.44
LMNA-222ENST00000508500 ALKAL1Q6UXT8 129 aa17.82■□□□□ 0.44
LMNA-222ENST00000508500 ZBTB33Q86T24 672 aa17.82■□□□□ 0.44
LMNA-222ENST00000508500 ZBTB45Q96K62 511 aaPredicted RBP17.82■□□□□ 0.44
LMNA-222ENST00000508500 CLSTN3Q9BQT9 956 aa17.82■□□□□ 0.44
LMNA-222ENST00000508500 NTPCRQ9BSD7 190 aaKnown RBP17.82■□□□□ 0.44
LMNA-222ENST00000508500 GOLGA2P5Q9HBQ8 144 aa17.82■□□□□ 0.44
LMNA-222ENST00000508500 KMT5AQ9NQR1 393 aa17.82■□□□□ 0.44
LMNA-222ENST00000508500 MYH15Q9Y2K3 1946 aa17.82■□□□□ 0.44
LMNA-222ENST00000508500 SF3B1O75533 1304 aaKnown RBP eCLIP17.81■□□□□ 0.44
LMNA-222ENST00000508500 NPHP3-ACAD11A0A0J9YXS1 232 aa17.81■□□□□ 0.44
LMNA-222ENST00000508500 SPDYE4A6NLX3 237 aa17.81■□□□□ 0.44
LMNA-222ENST00000508500 SLC16A4O15374 487 aa17.81■□□□□ 0.44
LMNA-222ENST00000508500 ADAM12O43184 909 aa17.81■□□□□ 0.44
LMNA-222ENST00000508500 AVPR2P30518 371 aa17.81■□□□□ 0.44
LMNA-222ENST00000508500 GRM5P41594 1212 aa17.81■□□□□ 0.44
LMNA-222ENST00000508500 DMP1Q13316 513 aaPredicted RBP17.81■□□□□ 0.44
LMNA-222ENST00000508500 ARSHQ5FYA8 562 aa17.81■□□□□ 0.44
LMNA-222ENST00000508500 FAM171A1Q5VUB5 890 aa17.81■□□□□ 0.44
LMNA-222ENST00000508500 ARL6IP4Q66PJ3 421 aaKnown RBP17.81■□□□□ 0.44
LMNA-222ENST00000508500 CCDC149Q6ZUS6 474 aa17.81■□□□□ 0.44
LMNA-222ENST00000508500 SUGP1Q8IWZ8 645 aaKnown RBP17.81■□□□□ 0.44
LMNA-222ENST00000508500 PLCD3Q8N3E9 789 aa17.81■□□□□ 0.44
LMNA-222ENST00000508500 C3orf58Q8NDZ4 430 aa17.81■□□□□ 0.44
LMNA-222ENST00000508500 HDAC7Q8WUI4 952 aa17.81■□□□□ 0.44
LMNA-222ENST00000508500 PIK3R5Q8WYR1 880 aa17.81■□□□□ 0.44
LMNA-222ENST00000508500 DRC1Q96MC2 740 aa17.81■□□□□ 0.44
LMNA-222ENST00000508500 ZMAT2Q96NC0 199 aaKnown RBP17.81■□□□□ 0.44
LMNA-222ENST00000508500 RHOBTB2Q9BYZ6 727 aa17.81■□□□□ 0.44
LMNA-222ENST00000508500 UPF2Q9HAU5 1272 aaKnown RBP17.81■□□□□ 0.44
LMNA-222ENST00000508500 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.81■□□□□ 0.444e-6■□□□□ 8.2
LMNA-222ENST00000508500 MYO15AQ9UKN7 3530 aa17.81■□□□□ 0.44
LMNA-222ENST00000508500 VPS13AQ96RL7 3174 aa17.8■□□□□ 0.44
LMNA-222ENST00000508500 SMIM28A0A1B0GU29 152 aa17.8■□□□□ 0.44
LMNA-222ENST00000508500 C1RP00736 705 aa17.8■□□□□ 0.44
LMNA-222ENST00000508500 CLCNKBP51801 687 aa17.8■□□□□ 0.44
LMNA-222ENST00000508500 OSTNP61366 133 aa17.8■□□□□ 0.44
LMNA-222ENST00000508500 CACNB1Q02641 598 aaPredicted RBP17.8■□□□□ 0.44
LMNA-222ENST00000508500 CUL4AQ13619 759 aa17.8■□□□□ 0.44
LMNA-222ENST00000508500 ZNF568Q3ZCX4 644 aa17.8■□□□□ 0.44
LMNA-222ENST00000508500 TTPALQ9BTX7 342 aa17.8■□□□□ 0.44
LMNA-222ENST00000508500 MRPL4Q9BYD3 311 aaKnown RBP17.8■□□□□ 0.44
LMNA-222ENST00000508500 NT5C3AQ9H0P0 336 aa17.8■□□□□ 0.44
LMNA-222ENST00000508500 C17orf75Q9HAS0 396 aa17.8■□□□□ 0.44
LMNA-222ENST00000508500 WDR6Q9NNW5 1121 aaKnown RBP17.8■□□□□ 0.44
LMNA-222ENST00000508500 RBM19Q9Y4C8 960 aaKnown RBP17.8■□□□□ 0.44
LMNA-222ENST00000508500 TMEM189-UBE2V1I3L0A0 370 aa17.79■□□□□ 0.44
LMNA-222ENST00000508500 PLA2G4BP0C869 781 aa17.79■□□□□ 0.44
LMNA-222ENST00000508500 MTMR3Q13615 1198 aa17.79■□□□□ 0.44
LMNA-222ENST00000508500 UPP1Q16831 310 aa17.79■□□□□ 0.44
LMNA-222ENST00000508500 RSPO2Q6UXX9 243 aaPredicted RBP17.79■□□□□ 0.44
LMNA-222ENST00000508500 CEP57Q86XR8 500 aa17.79■□□□□ 0.44
LMNA-222ENST00000508500 UBALD2Q8IYN6 164 aa17.79■□□□□ 0.44
LMNA-222ENST00000508500 TMEM161BQ8NDZ6 487 aa17.79■□□□□ 0.44
LMNA-222ENST00000508500 SPIRE2Q8WWL2 714 aa17.79■□□□□ 0.44
LMNA-222ENST00000508500 SMG7Q92540 1137 aaKnown RBP17.79■□□□□ 0.44
LMNA-222ENST00000508500 HAPLN2Q9GZV7 340 aa17.79■□□□□ 0.44
LMNA-222ENST00000508500 PLEKHA4Q9H4M7 779 aa17.79■□□□□ 0.44
LMNA-222ENST00000508500 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.79■□□□□ 0.44
LMNA-222ENST00000508500 ZMYND10O75800 440 aa17.78■□□□□ 0.44
LMNA-222ENST00000508500 MAPTP10636 758 aaKnown RBP17.78■□□□□ 0.44
LMNA-222ENST00000508500 PLS3P13797 630 aa17.78■□□□□ 0.44
LMNA-222ENST00000508500 FGFR3P22607 806 aa17.78■□□□□ 0.44
LMNA-222ENST00000508500 BRCC3P46736 316 aa17.78■□□□□ 0.44
LMNA-222ENST00000508500 PSMD5Q16401 504 aa17.78■□□□□ 0.44
LMNA-222ENST00000508500 SEZ6Q53EL9 994 aa17.78■□□□□ 0.44
LMNA-222ENST00000508500 DCLRE1AQ6PJP8 1040 aa17.78■□□□□ 0.44
LMNA-222ENST00000508500 CYP26C1Q6V0L0 522 aa17.78■□□□□ 0.44
LMNA-222ENST00000508500 OTOP3Q7RTS5 596 aa17.78■□□□□ 0.44
LMNA-222ENST00000508500 TMEM130Q8N3G9 435 aa17.78■□□□□ 0.44
LMNA-222ENST00000508500 KCTD17Q8N5Z5 321 aa17.78■□□□□ 0.44
LMNA-222ENST00000508500 SNX27Q96L92 541 aa17.78■□□□□ 0.44
LMNA-222ENST00000508500 MYADMQ96S97 322 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms