RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 TMEM189-UBE2V1I3L0A0 370 aa21.74■■□□□ 1.07
SFXN1-209ENST00000508290 CLASP2O75122 1294 aaKnown RBP21.74■■□□□ 1.07
SFXN1-209ENST00000508290 IL9P15248 144 aa21.74■■□□□ 1.07
SFXN1-209ENST00000508290 KCNE1P15382 129 aa21.74■■□□□ 1.07
SFXN1-209ENST00000508290 AMPD3Q01432 767 aa21.74■■□□□ 1.07
SFXN1-209ENST00000508290 DSG1Q02413 1049 aa21.74■■□□□ 1.07
SFXN1-209ENST00000508290 NAB2Q15742 525 aa21.74■■□□□ 1.07
SFXN1-209ENST00000508290 USP41Q3LFD5 358 aa21.74■■□□□ 1.07
SFXN1-209ENST00000508290 ANKRD54Q6NXT1 300 aa21.74■■□□□ 1.07
SFXN1-209ENST00000508290 FUT10Q6P4F1 479 aa21.74■■□□□ 1.07
SFXN1-209ENST00000508290 PDXDC1Q6P996 788 aa21.74■■□□□ 1.07
SFXN1-209ENST00000508290 MAP4K3Q8IVH8 894 aa21.74■■□□□ 1.07
SFXN1-209ENST00000508290 IQUBQ8NA54 791 aa21.74■■□□□ 1.07
SFXN1-209ENST00000508290 DDX27Q96GQ7 796 aaKnown RBP21.74■■□□□ 1.07
SFXN1-209ENST00000508290 PPP1R10Q96QC0 940 aaKnown RBP21.74■■□□□ 1.07
SFXN1-209ENST00000508290 TSPAN18Q96SJ8 248 aa21.74■■□□□ 1.07
SFXN1-209ENST00000508290 PLEKHA5Q9HAU0 1116 aa21.74■■□□□ 1.07
SFXN1-209ENST00000508290 OLFML3Q9NRN5 406 aa21.74■■□□□ 1.07
SFXN1-209ENST00000508290 CHST7Q9NS84 486 aa21.74■■□□□ 1.07
SFXN1-209ENST00000508290 BARX2Q9UMQ3 279 aaPredicted RBP21.74■■□□□ 1.07
SFXN1-209ENST00000508290 LILRB3O75022 631 aa21.73■■□□□ 1.07
SFXN1-209ENST00000508290 CLTAP09496 248 aa21.73■■□□□ 1.07
SFXN1-209ENST00000508290 ME1P48163 572 aa21.73■■□□□ 1.07
SFXN1-209ENST00000508290 FOXD4L5Q5VV16 416 aaPredicted RBP21.73■■□□□ 1.07
SFXN1-209ENST00000508290 ALKAL1Q6UXT8 129 aa21.73■■□□□ 1.07
SFXN1-209ENST00000508290 ZBTB33Q86T24 672 aa21.73■■□□□ 1.07
SFXN1-209ENST00000508290 ADHFE1Q8IWW8 467 aa21.73■■□□□ 1.07
SFXN1-209ENST00000508290 SPRYD3Q8NCJ5 442 aa21.73■■□□□ 1.07
SFXN1-209ENST00000508290 VN1R2Q8NFZ6 395 aa21.73■■□□□ 1.07
SFXN1-209ENST00000508290 FOXD4L4Q8WXT5 416 aaPredicted RBP21.73■■□□□ 1.07
SFXN1-209ENST00000508290 SNX27Q96L92 541 aa21.73■■□□□ 1.07
SFXN1-209ENST00000508290 FIZ1Q96SL8 496 aa21.73■■□□□ 1.07
SFXN1-209ENST00000508290 FAM13BQ9NYF5 915 aa21.73■■□□□ 1.07
SFXN1-209ENST00000508290 CNTN3Q9P232 1028 aa21.73■■□□□ 1.07
SFXN1-209ENST00000508290 MYH15Q9Y2K3 1946 aa21.72■■□□□ 1.07
SFXN1-209ENST00000508290 SMIM28A0A1B0GU29 152 aa21.72■■□□□ 1.07
SFXN1-209ENST00000508290 TRAPPC3O43617 180 aa21.72■■□□□ 1.07
SFXN1-209ENST00000508290 ADH1AP07327 375 aa21.72■■□□□ 1.07
SFXN1-209ENST00000508290 MATR3P43243 847 aaKnown RBP eCLIP21.72■■□□□ 1.07
SFXN1-209ENST00000508290 ITIH3Q06033 890 aa21.72■■□□□ 1.07
SFXN1-209ENST00000508290 PKP1Q13835 747 aa21.72■■□□□ 1.07
SFXN1-209ENST00000508290 SLFN12LQ6IEE8 588 aa21.72■■□□□ 1.07
SFXN1-209ENST00000508290 DCLRE1AQ6PJP8 1040 aa21.72■■□□□ 1.07
SFXN1-209ENST00000508290 DYMQ7RTS9 669 aa21.72■■□□□ 1.07
SFXN1-209ENST00000508290 CEP120Q8N960 986 aa21.72■■□□□ 1.07
SFXN1-209ENST00000508290 DNAJC19Q96DA6 116 aa21.72■■□□□ 1.07
SFXN1-209ENST00000508290 RXFP1Q9HBX9 757 aa21.72■■□□□ 1.07
SFXN1-209ENST00000508290 RCOR1Q9UKL0 485 aa21.72■■□□□ 1.07
SFXN1-209ENST00000508290 EXOC7Q9UPT5 735 aa21.72■■□□□ 1.07
SFXN1-209ENST00000508290 TDRD15B5MCY1 1934 aaKnown RBP21.71■■□□□ 1.07
SFXN1-209ENST00000508290 CASTOR2A6NHX0 329 aa21.71■■□□□ 1.07
SFXN1-209ENST00000508290 MYMKA6NI61 221 aa21.71■■□□□ 1.07
SFXN1-209ENST00000508290 RPL9P32969 192 aaKnown RBP21.71■■□□□ 1.07
SFXN1-209ENST00000508290 KRT85P78386 507 aa21.71■■□□□ 1.07
SFXN1-209ENST00000508290 POU5F1Q01860 360 aaKnown RBP21.71■■□□□ 1.07
SFXN1-209ENST00000508290 AXDND1Q5T1B0 1012 aaPredicted RBP21.71■■□□□ 1.07
SFXN1-209ENST00000508290 KIAA0319Q5VV43 1072 aa21.71■■□□□ 1.07
SFXN1-209ENST00000508290 CES5AQ6NT32 575 aa21.71■■□□□ 1.07
SFXN1-209ENST00000508290 ZNF720Q7Z2F6 126 aa21.71■■□□□ 1.07
SFXN1-209ENST00000508290 CCDC65Q8IXS2 484 aa21.71■■□□□ 1.07
SFXN1-209ENST00000508290 GJD3Q8N144 294 aa21.71■■□□□ 1.07
SFXN1-209ENST00000508290 PDILTQ8N807 584 aa21.71■■□□□ 1.07
SFXN1-209ENST00000508290 AUTS2Q8WXX7 1259 aa21.71■■□□□ 1.07
SFXN1-209ENST00000508290 NECTIN4Q96NY8 510 aa21.71■■□□□ 1.07
SFXN1-209ENST00000508290 KLHL5Q96PQ7 755 aa21.71■■□□□ 1.07
SFXN1-209ENST00000508290 MRPL44Q9H9J2 332 aaKnown RBP21.71■■□□□ 1.07
SFXN1-209ENST00000508290 KBTBD4Q9NVX7 518 aa21.71■■□□□ 1.07
SFXN1-209ENST00000508290 FNIP2Q9P278 1114 aa21.71■■□□□ 1.07
SFXN1-209ENST00000508290 PCDHB13Q9Y5F0 798 aa21.71■■□□□ 1.07
SFXN1-209ENST00000508290 FRMD3A2A2Y4 597 aa21.7■■□□□ 1.06
SFXN1-209ENST00000508290 OGTO15294 1046 aa21.7■■□□□ 1.06
SFXN1-209ENST00000508290 CNPP09543 421 aaKnown RBP21.7■■□□□ 1.06
SFXN1-209ENST00000508290 HARSP12081 509 aaKnown RBP21.7■■□□□ 1.06
SFXN1-209ENST00000508290 KLRC2P26717 231 aa21.7■■□□□ 1.06
SFXN1-209ENST00000508290 OSTNP61366 133 aa21.7■■□□□ 1.06
SFXN1-209ENST00000508290 DNM1Q05193 864 aaKnown RBP21.7■■□□□ 1.06
SFXN1-209ENST00000508290 CLUL1Q15846 466 aa21.7■■□□□ 1.06
SFXN1-209ENST00000508290 E2F4Q16254 413 aa21.7■■□□□ 1.06
SFXN1-209ENST00000508290 LLGL2Q6P1M3 1020 aa21.7■■□□□ 1.06
SFXN1-209ENST00000508290 CNNM4Q6P4Q7 775 aa21.7■■□□□ 1.06
SFXN1-209ENST00000508290 SHC4Q6S5L8 630 aa21.7■■□□□ 1.06
SFXN1-209ENST00000508290 STXBP4Q6ZWJ1 553 aa21.7■■□□□ 1.06
SFXN1-209ENST00000508290 SFR1Q86XK3 245 aa21.7■■□□□ 1.06
SFXN1-209ENST00000508290 CD302Q8IX05 232 aa21.7■■□□□ 1.06
SFXN1-209ENST00000508290 SLC22A17Q8WUG5 538 aa21.7■■□□□ 1.06
SFXN1-209ENST00000508290 ZBTB45Q96K62 511 aaPredicted RBP21.7■■□□□ 1.06
SFXN1-209ENST00000508290 NECAB3Q96P71 396 aaPredicted RBP21.7■■□□□ 1.06
SFXN1-209ENST00000508290 USP15Q9Y4E8 981 aaPredicted RBP21.7■■□□□ 1.06
SFXN1-209ENST00000508290 MYH11P35749 1972 aa21.7■■□□□ 1.06
SFXN1-209ENST00000508290 A0A087X0B3 334 aa21.69■■□□□ 1.06
SFXN1-209ENST00000508290 A0A0B4J269 797 aa21.69■■□□□ 1.06
SFXN1-209ENST00000508290 XPOTO43592 962 aaKnown RBP21.69■■□□□ 1.06
SFXN1-209ENST00000508290 B3GAT3O94766 335 aa21.69■■□□□ 1.06
SFXN1-209ENST00000508290 KIF4AO95239 1232 aa21.69■■□□□ 1.06
SFXN1-209ENST00000508290 IDEP14735 1019 aa21.69■■□□□ 1.06
SFXN1-209ENST00000508290 NMT1P30419 496 aaKnown RBP21.69■■□□□ 1.06
SFXN1-209ENST00000508290 ZP2Q05996 745 aa21.69■■□□□ 1.06
SFXN1-209ENST00000508290 POSTNQ15063 836 aa21.69■■□□□ 1.06
SFXN1-209ENST00000508290 UPP1Q16831 310 aa21.69■■□□□ 1.06
SFXN1-209ENST00000508290 HERC4Q5GLZ8 1057 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms