RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 C1orf54Q8WWF1 131 aa11.71□□□□□ -0.54
LIN54-207ENST00000508171 SPIRE2Q8WWL2 714 aa11.71□□□□□ -0.54
LIN54-207ENST00000508171 TLCD1Q96CP7 247 aa11.71□□□□□ -0.54
LIN54-207ENST00000508171 CYFIP2Q96F07 1278 aa11.71□□□□□ -0.54
LIN54-207ENST00000508171 SEPT9Q9UHD8 586 aaPredicted RBP11.71□□□□□ -0.54
LIN54-207ENST00000508171 FGFR4P22455 802 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 EIF3BP55884 814 aaKnown RBP11.7□□□□□ -0.54
LIN54-207ENST00000508171 IFI35P80217 286 aaPredicted RBP11.7□□□□□ -0.54
LIN54-207ENST00000508171 IFT88Q13099 833 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 SNX1Q13596 522 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 CYP1B1Q16678 543 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 DENND2CQ68D51 928 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 OTUD6BQ8N6M0 293 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 MORC4Q8TE76 937 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 PSPC1Q8WXF1 523 aaKnown RBP11.7□□□□□ -0.54
LIN54-207ENST00000508171 JDP2Q8WYK2 163 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 UVRAGQ9P2Y5 699 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 ANAPC7Q9UJX3 599 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 RLFQ13129 1914 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 NUDT17P0C025 328 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 SCP2P22307 547 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 SSTR3P32745 418 aaPredicted RBP11.7□□□□□ -0.54
LIN54-207ENST00000508171 ACOT2P49753 483 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 HMGCS2P54868 508 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 BACE1P56817 501 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 RWDD2BP57060 319 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 PDE4CQ08493 712 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 TNFAIP1Q13829 316 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 CLEC16AQ2KHT3 1053 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 BRDTQ58F21 947 aaPredicted RBP11.7□□□□□ -0.54
LIN54-207ENST00000508171 SPOPLQ6IQ16 392 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 SAMD3Q8N6K7 520 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 GPRASP2Q96D09 838 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 SENP7Q9BQF6 1050 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 VPS33BQ9H267 617 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 CYP26B1Q9NR63 512 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 DDX20Q9UHI6 824 aaKnown RBP11.7□□□□□ -0.54
LIN54-207ENST00000508171 HACL1Q9UJ83 578 aa11.7□□□□□ -0.54
LIN54-207ENST00000508171 GGPS1O95749 300 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 CPP00450 1065 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 CFHP08603 1231 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 UNGP13051 313 aaPredicted RBP11.69□□□□□ -0.54
LIN54-207ENST00000508171 SLCO1A2P46721 670 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 SP2Q02086 613 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 PRKCEQ02156 737 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 MTERF2Q49AM1 385 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 SPDYCQ5MJ68 293 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 FBXW10Q5XX13 1052 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 REPS2Q8NFH8 660 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 ATP6V0A1Q93050 837 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 HVCN1Q96D96 273 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 HERPUD2Q9BSE4 406 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 PAGR1Q9BTK6 254 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 MTUS1Q9ULD2 1270 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 VGLL3A8MV65 326 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 TP73O15350 636 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 DGAT1O75907 488 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 KIAA0754O94854 1291 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 RRM1P23921 792 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 MAPK4P31152 587 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 ACTR2P61160 394 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 TMEM132BQ14DG7 1078 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 RNF187Q5TA31 235 aaPredicted RBP11.69□□□□□ -0.54
LIN54-207ENST00000508171 CCDC25Q86WR0 208 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 MCOLN2Q8IZK6 566 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 RDM1Q8NG50 284 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 NSUN6Q8TEA1 469 aaKnown RBP11.69□□□□□ -0.54
LIN54-207ENST00000508171 ZNF526Q8TF50 670 aaPredicted RBP11.69□□□□□ -0.54
LIN54-207ENST00000508171 ATG4AQ8WYN0 398 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 TMEM143Q96AN5 459 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 ZBTB45Q96K62 511 aaPredicted RBP11.69□□□□□ -0.54
LIN54-207ENST00000508171 HAPLN2Q9GZV7 340 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 POLR3FQ9H1D9 316 aaPredicted RBP11.69□□□□□ -0.54
LIN54-207ENST00000508171 AZI2Q9H6S1 392 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 C17orf75Q9HAS0 396 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 JPH1Q9HDC5 661 aaPredicted RBP11.69□□□□□ -0.54
LIN54-207ENST00000508171 SLC9A2Q9UBY0 812 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 ZNF214Q9UL59 606 aaPredicted RBP11.69□□□□□ -0.54
LIN54-207ENST00000508171 PTPRJQ12913 1337 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 MROH7Q68CQ1 1323 aa11.69□□□□□ -0.54
LIN54-207ENST00000508171 PCNTO95613 3336 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 SRRM3A6NNA2 597 aaPredicted RBP11.68□□□□□ -0.54
LIN54-207ENST00000508171 MAFGO15525 162 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 PSAPP07602 524 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 TNNI1P19237 187 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 GTF2H1P32780 548 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 NLRP11P59045 1033 aaKnown RBP11.68□□□□□ -0.54
LIN54-207ENST00000508171 ZNF280AP59817 542 aaPredicted RBP11.68□□□□□ -0.54
LIN54-207ENST00000508171 GCNT1Q02742 428 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 FSTL1Q12841 308 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 BYSLQ13895 437 aaKnown RBP11.68□□□□□ -0.54
LIN54-207ENST00000508171 SCARA3Q6AZY7 606 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 C6orf89Q6UWU4 347 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 C15orf39Q6ZRI6 1047 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 EPS8L3Q8TE67 593 aaKnown RBP11.68□□□□□ -0.54
LIN54-207ENST00000508171 ART4Q93070 314 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 ADAM7Q9H2U9 754 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 CHST7Q9NS84 486 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 ARHGAP28Q9P2N2 729 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 CAPN7Q9Y6W3 813 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms