RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 PLXNB2O15031 1838 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 RBM47A0AV96 593 aaKnown RBP18.99■□□□□ 0.63
SFXN1-208ENST00000507823 CCDC188H7C350 402 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 NOP56O00567 594 aaKnown RBP18.99■□□□□ 0.63
SFXN1-208ENST00000507823 CEP104O60308 925 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 USP8P40818 1118 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 DNA2P51530 1060 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 LAMTOR4Q0VGL1 99 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 NNTQ13423 1086 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 TTLL4Q14679 1199 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 EMBQ6PCB8 327 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 ABRAQ8N0Z2 381 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 GLG1Q92896 1179 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 MS4A4AQ96JQ5 239 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 SPATA33Q96N06 139 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 RPS6KC1Q96S38 1066 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 MRPL4Q9BYD3 311 aaKnown RBP18.99■□□□□ 0.63
SFXN1-208ENST00000507823 C2orf40Q9H1Z8 148 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 GTF3C4Q9UKN8 822 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 NOC2LQ9Y3T9 749 aaKnown RBP18.99■□□□□ 0.63
SFXN1-208ENST00000507823 TOM1L1O75674 476 aa18.98■□□□□ 0.63
SFXN1-208ENST00000507823 AP3M2P53677 418 aa18.98■□□□□ 0.63
SFXN1-208ENST00000507823 ZBTB41Q5SVQ8 909 aa18.98■□□□□ 0.63
SFXN1-208ENST00000507823 HBP1O60381 514 aa18.98■□□□□ 0.63
SFXN1-208ENST00000507823 ACO1P21399 889 aaKnown RBP18.98■□□□□ 0.63
SFXN1-208ENST00000507823 EPHB4P54760 987 aa18.98■□□□□ 0.63
SFXN1-208ENST00000507823 SLC7A5Q01650 507 aa18.98■□□□□ 0.63
SFXN1-208ENST00000507823 ZNF467Q7Z7K2 595 aaPredicted RBP18.98■□□□□ 0.63
SFXN1-208ENST00000507823 TRIM50Q86XT4 487 aa18.98■□□□□ 0.63
SFXN1-208ENST00000507823 IFT20Q8IY31 132 aa18.98■□□□□ 0.63
SFXN1-208ENST00000507823 GPRC5AQ8NFJ5 357 aa18.98■□□□□ 0.63
SFXN1-208ENST00000507823 ACO2Q99798 780 aaKnown RBP18.98■□□□□ 0.63
SFXN1-208ENST00000507823 PI4K2AQ9BTU6 479 aa18.98■□□□□ 0.63
SFXN1-208ENST00000507823 EFCC1Q9HA90 598 aa18.98■□□□□ 0.63
SFXN1-208ENST00000507823 ACP6Q9NPH0 428 aa18.98■□□□□ 0.63
SFXN1-208ENST00000507823 MORF4L1Q9UBU8 362 aa18.98■□□□□ 0.63
SFXN1-208ENST00000507823 ZSWIM8A7E2V4 1837 aa18.98■□□□□ 0.63
SFXN1-208ENST00000507823 MIF4GDA9UHW6 222 aaKnown RBP18.97■□□□□ 0.63
SFXN1-208ENST00000507823 GLI1P08151 1106 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 TXNP10599 105 aaKnown RBP18.97■□□□□ 0.63
SFXN1-208ENST00000507823 TNNI1P19237 187 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 PROZP22891 400 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 MCL1Q07820 350 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 CLEC16AQ2KHT3 1053 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 WDR44Q5JSH3 913 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 DCAF12L1Q5VU92 463 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 ACAD10Q6JQN1 1059 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 KRT12Q99456 494 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 MED4Q9NPJ6 270 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 BPIFB4P59827 614 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 CCNA1P78396 465 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 ARHGAP1Q07960 439 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 CLUL1Q15846 466 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 EAPPQ56P03 285 aaPredicted RBP18.97■□□□□ 0.63
SFXN1-208ENST00000507823 TAF3Q5VWG9 929 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 ARMCX2Q7L311 632 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.97■□□□□ 0.63
SFXN1-208ENST00000507823 EMID1Q96A84 441 aaPredicted RBP18.97■□□□□ 0.63
SFXN1-208ENST00000507823 UVRAGQ9P2Y5 699 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 PCDHB2Q9Y5E7 798 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 ALG6Q9Y672 507 aa18.97■□□□□ 0.63
SFXN1-208ENST00000507823 TTLL13PA6NNM8 815 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 CLDN3O15551 220 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 CYP2C8P10632 490 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 CETPP11597 493 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 UNGP13051 313 aaPredicted RBP18.96■□□□□ 0.63
SFXN1-208ENST00000507823 TAPT1Q6NXT6 567 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 GSPT2Q8IYD1 628 aaKnown RBP18.96■□□□□ 0.63
SFXN1-208ENST00000507823 NFKBIZQ9BYH8 718 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 FZD8Q9H461 694 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 PTPRHQ9HD43 1115 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 VTA1Q9NP79 307 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.96■□□□□ 0.634e-6■■■■■ 72.1
SFXN1-208ENST00000507823 CTTNBP2NLQ9P2B4 639 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 ANKFY1Q9P2R3 1169 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 HEXIM1O94992 359 aaKnown RBP18.96■□□□□ 0.63
SFXN1-208ENST00000507823 PIK3CAP42336 1068 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 DMTNQ08495 405 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 MAMDC4Q6UXC1 1216 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 WDR49Q8IV35 697 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 ZBTB8OSQ8IWT0 167 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 COPS5Q92905 334 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 CD101Q93033 1021 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 SLITRK6Q9H5Y7 841 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 APOBEC3GQ9HC16 384 aaKnown RBP18.96■□□□□ 0.63
SFXN1-208ENST00000507823 PDGFCQ9NRA1 345 aa18.96■□□□□ 0.63
SFXN1-208ENST00000507823 ASAP2O43150 1006 aa18.95■□□□□ 0.62
SFXN1-208ENST00000507823 RAD51CO43502 376 aa18.95■□□□□ 0.62
SFXN1-208ENST00000507823 MARK3P27448 753 aa18.95■□□□□ 0.62
SFXN1-208ENST00000507823 FKBP1BP68106 108 aa18.95■□□□□ 0.62
SFXN1-208ENST00000507823 POU5F1BQ06416 359 aa18.95■□□□□ 0.62
SFXN1-208ENST00000507823 LMBRD2Q68DH5 695 aaPredicted RBP18.95■□□□□ 0.62
SFXN1-208ENST00000507823 TSHZ1Q6ZSZ6 1077 aa18.95■□□□□ 0.62
SFXN1-208ENST00000507823 ANKRD23Q86SG2 305 aa18.95■□□□□ 0.62
SFXN1-208ENST00000507823 UBR7Q8N806 425 aa18.95■□□□□ 0.62
SFXN1-208ENST00000507823 FAM84AQ96KN4 292 aa18.95■□□□□ 0.62
SFXN1-208ENST00000507823 KATNBL1Q9H079 304 aa18.95■□□□□ 0.62
SFXN1-208ENST00000507823 OGTO15294 1046 aa18.95■□□□□ 0.62
SFXN1-208ENST00000507823 PRKCBP05771 671 aa18.95■□□□□ 0.62
SFXN1-208ENST00000507823 GCLCP48506 637 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms