RNA–Protein interactions for RNA: ENST00000507395.1

SFXN1-207, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-207ENST00000507395 TMEM189-UBE2V1I3L0A0 370 aa19.41■□□□□ 0.7
SFXN1-207ENST00000507395 M0R296 226 aa19.41■□□□□ 0.7
SFXN1-207ENST00000507395 TGM5O43548 720 aa19.41■□□□□ 0.7
SFXN1-207ENST00000507395 PLS3P13797 630 aa19.41■□□□□ 0.7
SFXN1-207ENST00000507395 RPL17P18621 184 aaKnown RBP19.41■□□□□ 0.7
SFXN1-207ENST00000507395 SOX4Q06945 474 aaPredicted RBP19.41■□□□□ 0.7
SFXN1-207ENST00000507395 PTPAQ15257 358 aa19.41■□□□□ 0.7
SFXN1-207ENST00000507395 SF3A1Q15459 793 aaKnown RBP19.41■□□□□ 0.7
SFXN1-207ENST00000507395 GLRA4Q5JXX5 417 aa19.41■□□□□ 0.7
SFXN1-207ENST00000507395 ZDHHC14Q8IZN3 488 aa19.41■□□□□ 0.7
SFXN1-207ENST00000507395 LNX1Q8TBB1 728 aaPredicted RBP19.41■□□□□ 0.7
SFXN1-207ENST00000507395 HDAC7Q8WUI4 952 aa19.41■□□□□ 0.7
SFXN1-207ENST00000507395 RIN2Q8WYP3 895 aaPredicted RBP19.41■□□□□ 0.7
SFXN1-207ENST00000507395 ZNF707Q96C28 371 aaPredicted RBP19.41■□□□□ 0.7
SFXN1-207ENST00000507395 ZBTB45Q96K62 511 aaPredicted RBP19.41■□□□□ 0.7
SFXN1-207ENST00000507395 ZMAT2Q96NC0 199 aaKnown RBP19.41■□□□□ 0.7
SFXN1-207ENST00000507395 CLSTN3Q9BQT9 956 aa19.41■□□□□ 0.7
SFXN1-207ENST00000507395 TSHZ2Q9NRE2 1034 aa19.41■□□□□ 0.7
SFXN1-207ENST00000507395 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.41■□□□□ 0.7
SFXN1-207ENST00000507395 SF3B1O75533 1304 aaKnown RBP eCLIP19.41■□□□□ 0.79e-6■■■■■ 68.9
SFXN1-207ENST00000507395 SMIM28A0A1B0GU29 152 aa19.4■□□□□ 0.7
SFXN1-207ENST00000507395 RFPL2O75678 378 aa19.4■□□□□ 0.7
SFXN1-207ENST00000507395 GLUD1P00367 558 aa19.4■□□□□ 0.7
SFXN1-207ENST00000507395 MAPTP10636 758 aaKnown RBP19.4■□□□□ 0.7
SFXN1-207ENST00000507395 CACNB1Q02641 598 aaPredicted RBP19.4■□□□□ 0.7
SFXN1-207ENST00000507395 SIGLEC14Q08ET2 396 aa19.4■□□□□ 0.7
SFXN1-207ENST00000507395 PRSS55Q6UWB4 352 aaPredicted RBP19.4■□□□□ 0.7
SFXN1-207ENST00000507395 C3orf58Q8NDZ4 430 aa19.4■□□□□ 0.7
SFXN1-207ENST00000507395 PIK3R5Q8WYR1 880 aa19.4■□□□□ 0.7
SFXN1-207ENST00000507395 HAPLN2Q9GZV7 340 aa19.4■□□□□ 0.7
SFXN1-207ENST00000507395 MYO10Q9HD67 2058 aa19.4■□□□□ 0.7
SFXN1-207ENST00000507395 CCDC195A0A1B0GUA6 201 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 BMP15O95972 392 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 SPATA31D3P0C874 917 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 MCF2P10911 925 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 SYT1P21579 422 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 LONP1P36776 959 aaKnown RBP19.39■□□□□ 0.69
SFXN1-207ENST00000507395 CLCNKBP51801 687 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 NCKAP1LP55160 1127 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 RESTQ13127 1097 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 UPP1Q16831 310 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 ZNF568Q3ZCX4 644 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 FAM171A1Q5VUB5 890 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 MPZL3Q6UWV2 235 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 SPATA31D4Q6ZUB0 917 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 PALB2Q86YC2 1186 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 SNX27Q96L92 541 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 TTPALQ9BTX7 342 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 GOLGA2P5Q9HBQ8 144 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 CLIC4Q9Y696 253 aa19.39■□□□□ 0.69
SFXN1-207ENST00000507395 N4BP1O75113 896 aaKnown RBP19.38■□□□□ 0.69
SFXN1-207ENST00000507395 MYBP10242 640 aa19.38■□□□□ 0.69
SFXN1-207ENST00000507395 KCNE1P15382 129 aa19.38■□□□□ 0.69
SFXN1-207ENST00000507395 FGFR3P22607 806 aa19.38■□□□□ 0.69
SFXN1-207ENST00000507395 ZNF131P52739 623 aa19.38■□□□□ 0.69
SFXN1-207ENST00000507395 DCLRE1AQ6PJP8 1040 aa19.38■□□□□ 0.69
SFXN1-207ENST00000507395 CYP26C1Q6V0L0 522 aa19.38■□□□□ 0.69
SFXN1-207ENST00000507395 USP49Q70CQ1 688 aa19.38■□□□□ 0.69
SFXN1-207ENST00000507395 ZBTB33Q86T24 672 aa19.38■□□□□ 0.69
SFXN1-207ENST00000507395 KREMEN2Q8NCW0 462 aa19.38■□□□□ 0.69
SFXN1-207ENST00000507395 INTS4Q96HW7 963 aaKnown RBP19.38■□□□□ 0.69
SFXN1-207ENST00000507395 CDK5RAP3Q96JB5 506 aa19.38■□□□□ 0.69
SFXN1-207ENST00000507395 FIZ1Q96SL8 496 aa19.38■□□□□ 0.69
SFXN1-207ENST00000507395 REEP2Q9BRK0 252 aa19.38■□□□□ 0.69
SFXN1-207ENST00000507395 SMOC2Q9H3U7 446 aa19.38■□□□□ 0.69
SFXN1-207ENST00000507395 PLEKHA4Q9H4M7 779 aa19.38■□□□□ 0.69
SFXN1-207ENST00000507395 CNTN3Q9P232 1028 aa19.38■□□□□ 0.69
SFXN1-207ENST00000507395 PDCD11Q14690 1871 aaKnown RBP19.37■□□□□ 0.69
SFXN1-207ENST00000507395 VPS37CA5D8V6 355 aaPredicted RBP19.37■□□□□ 0.69
SFXN1-207ENST00000507395 ADAM12O43184 909 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 TOM1L1O75674 476 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 ASGR2P07307 311 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 PLCG1P19174 1290 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 UBA7P41226 1012 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 OSTNP61366 133 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 CREMQ03060 361 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 KARSQ15046 597 aaKnown RBP19.37■□□□□ 0.69
SFXN1-207ENST00000507395 FAM173BQ6P4H8 233 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 ZPBP2Q6X784 338 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 APBB1IPQ7Z5R6 666 aaPredicted RBP19.37■□□□□ 0.69
SFXN1-207ENST00000507395 GLYCTKQ8IVS8 523 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 PLCD3Q8N3E9 789 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 TDRD5Q8NAT2 981 aaKnown RBP19.37■□□□□ 0.69
SFXN1-207ENST00000507395 MFSD14AQ96MC6 490 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 CCDC94Q9BW85 323 aaPredicted RBP19.37■□□□□ 0.69
SFXN1-207ENST00000507395 CCSER1Q9C0I3 900 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 WDR6Q9NNW5 1121 aaKnown RBP19.37■□□□□ 0.69
SFXN1-207ENST00000507395 LIMD1Q9UGP4 676 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 DPP7Q9UHL4 492 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 KCNG1Q9UIX4 513 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 ODF2LQ9ULJ1 636 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 SORCS3Q9UPU3 1222 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 KMT2EQ8IZD2 1858 aa19.37■□□□□ 0.69
SFXN1-207ENST00000507395 CITO14578 2027 aa19.36■□□□□ 0.69
SFXN1-207ENST00000507395 PDCP20941 246 aa19.36■□□□□ 0.69
SFXN1-207ENST00000507395 SMTNP53814 917 aa19.36■□□□□ 0.69
SFXN1-207ENST00000507395 MCL1Q07820 350 aa19.36■□□□□ 0.69
SFXN1-207ENST00000507395 ELAVL2Q12926 359 aaKnown RBP19.36■□□□□ 0.69
SFXN1-207ENST00000507395 MCM6Q14566 821 aa19.36■□□□□ 0.69
SFXN1-207ENST00000507395 SLC10A6Q3KNW5 377 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms