RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 FAM13CQ8NE31 585 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 DENND1AQ8TEH3 1009 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 AMNQ9BXJ7 453 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 SENP1Q9P0U3 644 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 RBBP6Q7Z6E9 1792 aaKnown RBP18.94■□□□□ 0.62
NUP54-205ENST00000507257 LRRD1A4D1F6 860 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 SFI1A8K8P3 1242 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 EML1O00423 815 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 EXOC3O60645 756 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 ATF2P15336 505 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 WDR4P57081 412 aaKnown RBP18.94■□□□□ 0.62
NUP54-205ENST00000507257 INHBEP58166 350 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 TSNAXIP1Q2TAA8 658 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 TMEM63BQ5T3F8 832 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.94■□□□□ 0.62
NUP54-205ENST00000507257 ZNF398Q8TD17 642 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 SLC7A6OSQ96CW6 309 aaPredicted RBP18.94■□□□□ 0.62
NUP54-205ENST00000507257 ERP27Q96DN0 273 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 MLXIPLQ9NP71 852 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 ANAPC5Q9UJX4 755 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 NEU2Q9Y3R4 380 aa18.94■□□□□ 0.62
NUP54-205ENST00000507257 MYH11P35749 1972 aa18.93■□□□□ 0.62
NUP54-205ENST00000507257 ECE2O60344 883 aa18.93■□□□□ 0.62
NUP54-205ENST00000507257 PEX19P40855 299 aa18.93■□□□□ 0.62
NUP54-205ENST00000507257 RAD23BP54727 409 aa18.93■□□□□ 0.62
NUP54-205ENST00000507257 ALCAMQ13740 583 aa18.93■□□□□ 0.62
NUP54-205ENST00000507257 ARHGEF19Q8IW93 802 aa18.93■□□□□ 0.62
NUP54-205ENST00000507257 MFN1Q8IWA4 741 aa18.93■□□□□ 0.62
NUP54-205ENST00000507257 SRRM1Q8IYB3 904 aaKnown RBP18.93■□□□□ 0.62
NUP54-205ENST00000507257 ATL2Q8NHH9 583 aa18.93■□□□□ 0.62
NUP54-205ENST00000507257 ZFAND2BQ8WV99 257 aa18.93■□□□□ 0.62
NUP54-205ENST00000507257 IKZF4Q9H2S9 585 aa18.93■□□□□ 0.62
NUP54-205ENST00000507257 SAR1AQ9NR31 198 aa18.93■□□□□ 0.62
NUP54-205ENST00000507257 LNPEPQ9UIQ6 1025 aa18.93■□□□□ 0.62
NUP54-205ENST00000507257 SMG5Q9UPR3 1016 aaKnown RBP18.93■□□□□ 0.62
NUP54-205ENST00000507257 ASB3Q9Y575 518 aa18.93■□□□□ 0.62
NUP54-205ENST00000507257 EME2A4GXA9 379 aaPredicted RBP18.92■□□□□ 0.62
NUP54-205ENST00000507257 CLDN3O15551 220 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 SLITRK3O94933 977 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 SNUPNO95149 360 aaKnown RBP18.92■□□□□ 0.62
NUP54-205ENST00000507257 DLATP10515 647 aaKnown RBP18.92■□□□□ 0.62
NUP54-205ENST00000507257 PECAM1P16284 738 aaPredicted RBP18.92■□□□□ 0.62
NUP54-205ENST00000507257 CNGA1P29973 690 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 CDC25CP30307 473 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 CTCFP49711 727 aaPredicted RBP18.92■□□□□ 0.62
NUP54-205ENST00000507257 PTP4A2Q12974 167 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 PPP2R5CQ13362 524 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 RASA2Q15283 850 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 SPDYE1Q8NFV5 336 aaPredicted RBP18.92■□□□□ 0.62
NUP54-205ENST00000507257 POP1Q99575 1024 aaKnown RBP18.92■□□□□ 0.62
NUP54-205ENST00000507257 TBC1D10AQ9BXI6 508 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 DCLK3Q9C098 648 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 DCLRE1BQ9H816 532 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 PPCSQ9HAB8 311 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 RGL1Q9NZL6 768 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 PHTF1Q9UMS5 762 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 EDF1O60869 148 aaKnown RBP18.92■□□□□ 0.62
NUP54-205ENST00000507257 MAPTP10636 758 aaKnown RBP18.92■□□□□ 0.62
NUP54-205ENST00000507257 CETPP11597 493 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 GPSM2P81274 684 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 SPARCL1Q14515 664 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 PDK4Q16654 411 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 SYDE2Q5VT97 1194 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 SLC30A9Q6PML9 568 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 STRCQ7RTU9 1775 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 EMSYQ7Z589 1322 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 NOP9Q86U38 636 aaKnown RBP18.92■□□□□ 0.62
NUP54-205ENST00000507257 TRABD2AQ86V40 505 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 FAM167BQ9BTA0 163 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 YIPF3Q9GZM5 350 aa18.92■□□□□ 0.62
NUP54-205ENST00000507257 DPPA5A6NC42 116 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 RASA4BC9J798 803 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 RASA4O43374 803 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 T-ENOLP0DO92 83 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 VAMP7P51809 220 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 FMO1Q01740 532 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 KLC1Q07866 573 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 SLC45A4Q5BKX6 768 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 OTOP1Q7RTM1 612 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 CCDC89Q8N998 374 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 RBBP8NLQ8NC74 664 aaPredicted RBP18.91■□□□□ 0.62
NUP54-205ENST00000507257 KCNV2Q8TDN2 545 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 C1orf54Q8WWF1 131 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 SHC3Q92529 594 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 ZNF653Q96CK0 615 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 NACC1Q96RE7 527 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 NUDCD1Q96RS6 583 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 NYAP2Q9P242 653 aa18.91■□□□□ 0.62
NUP54-205ENST00000507257 SRP68Q9UHB9 627 aaKnown RBP18.91■□□□□ 0.62
NUP54-205ENST00000507257 IGLV3-22A0A075B6J6 115 aa18.9■□□□□ 0.62
NUP54-205ENST00000507257 PIK3CDO00329 1044 aa18.9■□□□□ 0.62
NUP54-205ENST00000507257 SGPL1O95470 568 aa18.9■□□□□ 0.62
NUP54-205ENST00000507257 GM2AP17900 193 aa18.9■□□□□ 0.62
NUP54-205ENST00000507257 PTPN4P29074 926 aa18.9■□□□□ 0.62
NUP54-205ENST00000507257 PCK1P35558 622 aa18.9■□□□□ 0.62
NUP54-205ENST00000507257 SLC1A1P43005 524 aa18.9■□□□□ 0.62
NUP54-205ENST00000507257 SNRPFP62306 86 aaKnown RBP18.9■□□□□ 0.62
NUP54-205ENST00000507257 RASA3Q14644 834 aa18.9■□□□□ 0.62
NUP54-205ENST00000507257 C10orf82Q8WW14 230 aa18.9■□□□□ 0.62
NUP54-205ENST00000507257 FAM81BQ96LP2 452 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms