RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 FAM43BQ6ZT52 329 aaPredicted RBP15.41■□□□□ 0.06
RNF4-208ENST00000507247 INTS8Q75QN2 995 aaKnown RBP15.41■□□□□ 0.06
RNF4-208ENST00000507247 RPUSD2Q8IZ73 545 aaKnown RBP15.41■□□□□ 0.06
RNF4-208ENST00000507247 PARD3BQ8TEW8 1205 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 FAM84AQ96KN4 292 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 SNX27Q96L92 541 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 METTL14Q9HCE5 456 aaKnown RBP15.41■□□□□ 0.06
RNF4-208ENST00000507247 TOPORSQ9NS56 1045 aaPredicted RBP15.41■□□□□ 0.06
RNF4-208ENST00000507247 TAB2Q9NYJ8 693 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 KLK14Q9P0G3 267 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 PARP2Q9UGN5 583 aa15.41■□□□□ 0.06
RNF4-208ENST00000507247 LIMA1Q9UHB6 759 aaKnown RBP15.41■□□□□ 0.06
RNF4-208ENST00000507247 FNDC1Q4ZHG4 1894 aaPredicted RBP15.41■□□□□ 0.06
RNF4-208ENST00000507247 LRRIQ3A6PVS8 624 aaPredicted RBP15.4■□□□□ 0.06
RNF4-208ENST00000507247 AP5Z1O43299 807 aa15.4■□□□□ 0.06
RNF4-208ENST00000507247 SKIP12755 728 aa15.4■□□□□ 0.06
RNF4-208ENST00000507247 KRT13P13646 458 aa15.4■□□□□ 0.06
RNF4-208ENST00000507247 COPB1P53618 953 aaKnown RBP15.4■□□□□ 0.06
RNF4-208ENST00000507247 POU5F1Q01860 360 aaKnown RBP15.4■□□□□ 0.06
RNF4-208ENST00000507247 SPAG1Q07617 926 aa15.4■□□□□ 0.06
RNF4-208ENST00000507247 IKBKEQ14164 716 aa15.4■□□□□ 0.06
RNF4-208ENST00000507247 HSP90AA2PQ14568 343 aaPredicted RBP15.4■□□□□ 0.06
RNF4-208ENST00000507247 MIIPQ5JXC2 388 aa15.4■□□□□ 0.06
RNF4-208ENST00000507247 LMBRD2Q68DH5 695 aaPredicted RBP15.4■□□□□ 0.06
RNF4-208ENST00000507247 ALKAL1Q6UXT8 129 aa15.4■□□□□ 0.06
RNF4-208ENST00000507247 RNF169Q8NCN4 708 aa15.4■□□□□ 0.06
RNF4-208ENST00000507247 TMC2Q8TDI7 906 aa15.4■□□□□ 0.06
RNF4-208ENST00000507247 SLC35C1Q96A29 364 aa15.4■□□□□ 0.06
RNF4-208ENST00000507247 CCDC127Q96BQ5 260 aa15.4■□□□□ 0.06
RNF4-208ENST00000507247 FAM212AQ96EL1 285 aa15.4■□□□□ 0.06
RNF4-208ENST00000507247 POP1Q99575 1024 aaKnown RBP15.4■□□□□ 0.06
RNF4-208ENST00000507247 TUBGCP2Q9BSJ2 902 aa15.4■□□□□ 0.06
RNF4-208ENST00000507247 RNF19AQ9NV58 838 aa15.4■□□□□ 0.06
RNF4-208ENST00000507247 PTPRJQ12913 1337 aa15.4■□□□□ 0.06
RNF4-208ENST00000507247 COL4A6Q14031 1691 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 ABHD14A-ACY1A0A1B0GW23 586 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 GOLGA6L3A6NEY3 463 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 TULP1O00294 542 aaPredicted RBP15.39■□□□□ 0.05
RNF4-208ENST00000507247 IL18RAPO95256 599 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 NFICP08651 508 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 DLATP10515 647 aaKnown RBP15.39■□□□□ 0.05
RNF4-208ENST00000507247 YARSP54577 528 aaKnown RBP15.39■□□□□ 0.05
RNF4-208ENST00000507247 FANCCQ00597 558 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 PPP2R3AQ06190 1150 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 ENPEPQ07075 957 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 GSE1Q14687 1217 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 MAN2A1Q16706 1144 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 UVSSAQ2YD98 709 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 XKR4Q5GH76 650 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 DCAF17Q5H9S7 520 aaPredicted RBP15.39■□□□□ 0.05
RNF4-208ENST00000507247 TMEM240Q5SV17 173 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 TCERG1LQ5VWI1 586 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 ZNF365Q70YC5 407 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 EFCAB13Q8IY85 973 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 CRIPAKQ8N1N5 446 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 TMEM130Q8N3G9 435 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 ZNF516Q92618 1163 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 ZFP42Q96MM3 310 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 ZMAT2Q96NC0 199 aaKnown RBP15.39■□□□□ 0.05
RNF4-208ENST00000507247 CGRRF1Q99675 332 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 VPS16Q9H269 839 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 ELAC1Q9H777 363 aaKnown RBP15.39■□□□□ 0.05
RNF4-208ENST00000507247 RSAD1Q9HA92 442 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 TMEM161AQ9NX61 479 aa15.39■□□□□ 0.05
RNF4-208ENST00000507247 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.39■□□□□ 0.05
RNF4-208ENST00000507247 LRRC10BA6NIK2 292 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 PTGESO14684 152 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 EOMESO95936 686 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 PRKCSHP14314 528 aaPredicted RBP15.38■□□□□ 0.05
RNF4-208ENST00000507247 MLH1P40692 756 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 AFF1P51825 1210 aaKnown RBP15.38■□□□□ 0.05
RNF4-208ENST00000507247 WDR5P61964 334 aaKnown RBP15.38■□□□□ 0.05
RNF4-208ENST00000507247 CLDN10P78369 228 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 DEFB103AP81534 67 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 PPP3CAQ08209 521 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 KCNH2Q12809 1159 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 GLRA4Q5JXX5 417 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 CLLU1OSQ5K130 101 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 JADE1Q6IE81 842 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 CHRDL2Q6WN34 429 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 OTOP2Q7RTS6 562 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 HACE1Q8IYU2 909 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 GSTCDQ8NEC7 633 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 PGBD4Q96DM1 585 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 NAP1L5Q96NT1 182 aaPredicted RBP15.38■□□□□ 0.05
RNF4-208ENST00000507247 FNBP1Q96RU3 617 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 GAD1Q99259 594 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 LBHD1Q9BQE6 289 aaPredicted RBP15.38■□□□□ 0.05
RNF4-208ENST00000507247 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.38■□□□□ 0.057e-7■■■□□ 16.9
RNF4-208ENST00000507247 ASB7Q9H672 318 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 PLEKHA5Q9HAU0 1116 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 GRPEL1Q9HAV7 217 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 MIOSQ9NXC5 875 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 CNTN3Q9P232 1028 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 GIT1Q9Y2X7 761 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 NR2E3Q9Y5X4 410 aa15.38■□□□□ 0.05
RNF4-208ENST00000507247 ARL5CA6NH57 179 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 BAIAP3O94812 1187 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 SERPINC1P01008 464 aa15.37■□□□□ 0.05
RNF4-208ENST00000507247 FGBP02675 491 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms