RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 PSAPP07602 524 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 PTPN2P17706 415 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 NT5C2P49902 561 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 DNM2P50570 870 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 SCNN1GP51170 649 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 CDC42EP1Q00587 391 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 DRP2Q13474 957 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 PSMD5Q16401 504 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 UVSSAQ2YD98 709 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 TXNDC11Q6PKC3 985 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 GPIHBP1Q8IV16 184 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 GPR65Q8IYL9 337 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 HASPINQ8TF76 798 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 PIK3R5Q8WYR1 880 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 PIGKQ92643 395 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 PGBD1Q96JS3 809 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 ZSWIM3Q96MP5 696 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 CORO1BQ9BR76 489 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 CHMP4BQ9H444 224 aaKnown RBP8.11□□□□□ -1.11
VCAN-207ENST00000507162 DCTPP1Q9H773 170 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 C8orf33Q9H7E9 229 aaPredicted RBP8.11□□□□□ -1.11
VCAN-207ENST00000507162 SENP2Q9HC62 589 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 ADAM28Q9UKQ2 775 aa8.11□□□□□ -1.11
VCAN-207ENST00000507162 SPTAN1Q13813 2472 aaKnown RBP8.1□□□□□ -1.11
VCAN-207ENST00000507162 COL12A1Q99715 3063 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 CCDC163A0A0D9SF12 145 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 hCG_1642624A0A1W2PR95 340 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 SPECC1L-ADORA2AF8WAN1 911 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 PYCARD-AS1I3L0S3 204 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 MEIS1O00470 390 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 IFIT3O14879 490 aaKnown RBP8.1□□□□□ -1.11
VCAN-207ENST00000507162 MX1P20591 662 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 OR1D2P34982 312 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 TIE1P35590 1138 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 MLH1P40692 756 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 FAM193AP78312 1265 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 IMMTQ16891 758 aaKnown RBP8.1□□□□□ -1.11
VCAN-207ENST00000507162 ZNF423Q2M1K9 1284 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 FAM171A1Q5VUB5 890 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 PKN3Q6P5Z2 889 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 C1orf228Q6PIY5 440 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 CYP2U1Q7Z449 544 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 PLA2G4DQ86XP0 818 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 RHPN2Q8IUC4 686 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 KSR1Q8IVT5 923 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 ZNF843Q8N446 348 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 LNX1Q8TBB1 728 aaPredicted RBP8.1□□□□□ -1.11
VCAN-207ENST00000507162 DEPDC1BQ8WUY9 529 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 SMARCD2Q92925 531 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 FAM167AQ96KS9 214 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 ZFP42Q96MM3 310 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 NLRP4Q96MN2 994 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 ASB16Q96NS5 453 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 TTPALQ9BTX7 342 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 CLMPQ9H6B4 373 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 CNNM2Q9H8M5 875 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 UBN1Q9NPG3 1134 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 SUCLA2Q9P2R7 463 aaPredicted RBP8.1□□□□□ -1.11
VCAN-207ENST00000507162 PCDHB15Q9Y5E8 787 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 PCDHA10Q9Y5I2 948 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 NOTCH2Q04721 2471 aa8.1□□□□□ -1.11
VCAN-207ENST00000507162 ERICH2A1L162 156 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 WDR27A2RRH5 827 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 HEPACAM2A8MVW5 462 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 ZNF197O14709 1029 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 DHX15O43143 795 aaKnown RBP8.09□□□□□ -1.11
VCAN-207ENST00000507162 ATG13O75143 517 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 LRG1P02750 347 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 OATP04181 439 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 DHPSP49366 369 aaPredicted RBP8.09□□□□□ -1.11
VCAN-207ENST00000507162 MFAP1P55081 439 aaKnown RBP8.09□□□□□ -1.11
VCAN-207ENST00000507162 KCNC4Q03721 635 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 DSC1Q08554 894 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 MTERF2Q49AM1 385 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 CYP4A22Q5TCH4 519 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 RAB44Q7Z6P3 723 aaPredicted RBP8.09□□□□□ -1.11
VCAN-207ENST00000507162 CATIPQ7Z7H3 387 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 MFSD6LQ8IWD5 586 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 CMTR1Q8N1G2 835 aaKnown RBP8.09□□□□□ -1.11
VCAN-207ENST00000507162 SYNPOQ8N3V7 929 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 PNPLA1Q8N8W4 532 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 SMG8Q8ND04 991 aaKnown RBP8.09□□□□□ -1.11
VCAN-207ENST00000507162 MSANTD3Q96H12 275 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 HHIPQ96QV1 700 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 SH2D3AQ9BRG2 576 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 ZNF577Q9BSK1 485 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 SLITRK6Q9H5Y7 841 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 CACNG4Q9UBN1 327 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 HES2Q9Y543 173 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 STK24Q9Y6E0 443 aa8.09□□□□□ -1.11
VCAN-207ENST00000507162 CCDC194A0A1B0GVG4 234 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 MYBPHLA2RUH7 354 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 IPO5O00410 1097 aaKnown RBP8.08□□□□□ -1.12
VCAN-207ENST00000507162 ATXN7O15265 892 aaPredicted RBP8.08□□□□□ -1.12
VCAN-207ENST00000507162 ZNF862O60290 1169 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 POU2F2P09086 479 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 SRGAP2CP0DJJ0 459 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 GJA1P17302 382 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 ELF1P32519 619 aa8.08□□□□□ -1.12
VCAN-207ENST00000507162 CTHP32929 405 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms