RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 FSCN2O14926 492 aa21.67■■□□□ 1.06
DDR1-259ENST00000507046 PRPF6O94906 941 aaKnown RBP21.67■■□□□ 1.06
DDR1-259ENST00000507046 KCNA1Q09470 495 aa21.67■■□□□ 1.06
DDR1-259ENST00000507046 XKR4Q5GH76 650 aa21.67■■□□□ 1.06
DDR1-259ENST00000507046 PLPP4Q5VZY2 271 aa21.67■■□□□ 1.06
DDR1-259ENST00000507046 TMC7Q7Z402 723 aa21.67■■□□□ 1.06
DDR1-259ENST00000507046 BCL7CQ8WUZ0 217 aaPredicted RBP21.67■■□□□ 1.06
DDR1-259ENST00000507046 POMGNT1Q8WZA1 660 aa21.67■■□□□ 1.06
DDR1-259ENST00000507046 HPS3Q969F9 1004 aa21.67■■□□□ 1.06
DDR1-259ENST00000507046 CCDC47Q96A33 483 aaKnown RBP21.67■■□□□ 1.06
DDR1-259ENST00000507046 PPP1R10Q96QC0 940 aaKnown RBP21.67■■□□□ 1.06
DDR1-259ENST00000507046 MARCH5Q9NX47 278 aa21.67■■□□□ 1.06
DDR1-259ENST00000507046 CNTN3Q9P232 1028 aa21.67■■□□□ 1.06
DDR1-259ENST00000507046 THEGQ9P2T0 379 aa21.67■■□□□ 1.06
DDR1-259ENST00000507046 STYXL1Q9Y6J8 313 aa21.67■■□□□ 1.06
DDR1-259ENST00000507046 SMIM28A0A1B0GU29 152 aa21.66■■□□□ 1.06
DDR1-259ENST00000507046 CASTOR2A6NHX0 329 aa21.66■■□□□ 1.06
DDR1-259ENST00000507046 CXCL8P10145 99 aa21.66■■□□□ 1.06
DDR1-259ENST00000507046 CA8P35219 290 aa21.66■■□□□ 1.06
DDR1-259ENST00000507046 ERVFC1P60507 584 aa21.66■■□□□ 1.06
DDR1-259ENST00000507046 PPP2R3AQ06190 1150 aa21.66■■□□□ 1.06
DDR1-259ENST00000507046 EHHADHQ08426 723 aa21.66■■□□□ 1.06
DDR1-259ENST00000507046 HSP90AA2PQ14568 343 aaPredicted RBP21.66■■□□□ 1.06
DDR1-259ENST00000507046 SMC1AQ14683 1233 aaKnown RBP21.66■■□□□ 1.06
DDR1-259ENST00000507046 KANK3Q6NY19 840 aa21.66■■□□□ 1.06
DDR1-259ENST00000507046 ALKAL1Q6UXT8 129 aa21.66■■□□□ 1.06
DDR1-259ENST00000507046 VPS52Q8N1B4 723 aa21.66■■□□□ 1.06
DDR1-259ENST00000507046 CXCL16Q9H2A7 254 aa21.66■■□□□ 1.06
DDR1-259ENST00000507046 RPF1Q9H9Y2 349 aaKnown RBP21.66■■□□□ 1.06
DDR1-259ENST00000507046 PLEKHA5Q9HAU0 1116 aa21.66■■□□□ 1.06
DDR1-259ENST00000507046 AGO2Q9UKV8 859 aaKnown RBP21.66■■□□□ 1.06
DDR1-259ENST00000507046 CITO14578 2027 aa21.66■■□□□ 1.06
DDR1-259ENST00000507046 FSD2A1L4K1 749 aa21.65■■□□□ 1.06
DDR1-259ENST00000507046 TISP43B9A030 160 aa21.65■■□□□ 1.06
DDR1-259ENST00000507046 NCK2O43639 380 aa21.65■■□□□ 1.06
DDR1-259ENST00000507046 FAM189A1O60320 539 aa21.65■■□□□ 1.06
DDR1-259ENST00000507046 KCNE1P15382 129 aa21.65■■□□□ 1.06
DDR1-259ENST00000507046 FAM160A1Q05DH4 1040 aa21.65■■□□□ 1.06
DDR1-259ENST00000507046 NAB2Q15742 525 aa21.65■■□□□ 1.06
DDR1-259ENST00000507046 UROC1Q96N76 676 aa21.65■■□□□ 1.06
DDR1-259ENST00000507046 ZBP1Q9H171 429 aa21.65■■□□□ 1.06
DDR1-259ENST00000507046 COG5Q9UP83 839 aa21.65■■□□□ 1.06
DDR1-259ENST00000507046 PCDHGC5Q9Y5F6 944 aa21.65■■□□□ 1.06
DDR1-259ENST00000507046 TNFSF9P41273 254 aa21.64■■□□□ 1.05
DDR1-259ENST00000507046 SLC10A6Q3KNW5 377 aa21.64■■□□□ 1.05
DDR1-259ENST00000507046 EPM2AIP1Q7L775 607 aaPredicted RBP21.64■■□□□ 1.05
DDR1-259ENST00000507046 ADGRD2Q7Z7M1 963 aa21.64■■□□□ 1.05
DDR1-259ENST00000507046 GLIS3Q8NEA6 775 aa21.64■■□□□ 1.05
DDR1-259ENST00000507046 HLA-CQ95604 372 aa21.64■■□□□ 1.05
DDR1-259ENST00000507046 HERC2P3Q9BVR0 1158 aa21.64■■□□□ 1.05
DDR1-259ENST00000507046 TLE6Q9H808 572 aa21.64■■□□□ 1.05
DDR1-259ENST00000507046 ADAM28Q9UKQ2 775 aa21.64■■□□□ 1.05
DDR1-259ENST00000507046 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.64■■□□□ 1.05
DDR1-259ENST00000507046 COL6A3P12111 3177 aa21.64■■□□□ 1.05
DDR1-259ENST00000507046 KLRC4O43908 158 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 TADA2AO75478 443 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 SOD2P04179 222 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 CTSAP10619 480 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 GARTP22102 1010 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 NRIP1P48552 1158 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 HYAL1Q12794 435 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 PSMD2Q13200 908 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 ENOX2Q16206 610 aaKnown RBP21.63■■□□□ 1.05
DDR1-259ENST00000507046 KMT5BQ4FZB7 885 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 ZBTB41Q5SVQ8 909 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 ARMCX5Q6P1M9 558 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.63■■□□□ 1.05
DDR1-259ENST00000507046 CD302Q8IX05 232 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 FMR1NBQ8N0W7 255 aaPredicted RBP21.63■■□□□ 1.05
DDR1-259ENST00000507046 ZNF507Q8TCN5 953 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 ZMAT2Q96NC0 199 aaKnown RBP21.63■■□□□ 1.05
DDR1-259ENST00000507046 CDCA3Q99618 268 aaPredicted RBP21.63■■□□□ 1.05
DDR1-259ENST00000507046 IKZF4Q9H2S9 585 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 SLC39A2Q9NP94 309 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 PRDM6Q9NQX0 595 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 CACNG4Q9UBN1 327 aa21.63■■□□□ 1.05
DDR1-259ENST00000507046 CPSF3Q9UKF6 684 aaKnown RBP21.63■■□□□ 1.05
DDR1-259ENST00000507046 SF3B1O75533 1304 aaKnown RBP eCLIP21.62■■□□□ 1.058e-6■■■■■ 107
DDR1-259ENST00000507046 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.62■■□□□ 1.05
DDR1-259ENST00000507046 TTC26A0AVF1 554 aa21.62■■□□□ 1.05
DDR1-259ENST00000507046 KIAA0391O15091 583 aaKnown RBP21.62■■□□□ 1.05
DDR1-259ENST00000507046 XPOTO43592 962 aaKnown RBP21.62■■□□□ 1.05
DDR1-259ENST00000507046 LDHAP00338 332 aaKnown RBP21.62■■□□□ 1.05
DDR1-259ENST00000507046 RPN1P04843 607 aaKnown RBP21.62■■□□□ 1.05
DDR1-259ENST00000507046 URODP06132 367 aa21.62■■□□□ 1.05
DDR1-259ENST00000507046 PRR29P0C7W0 189 aa21.62■■□□□ 1.05
DDR1-259ENST00000507046 ADSSP30520 456 aa21.62■■□□□ 1.05
DDR1-259ENST00000507046 ACOT2P49753 483 aa21.62■■□□□ 1.05
DDR1-259ENST00000507046 FUT10Q6P4F1 479 aa21.62■■□□□ 1.05
DDR1-259ENST00000507046 RBM23Q86U06 439 aaKnown RBP21.62■■□□□ 1.05
DDR1-259ENST00000507046 TMEM87AQ8NBN3 555 aa21.62■■□□□ 1.05
DDR1-259ENST00000507046 RABGGTAQ92696 567 aa21.62■■□□□ 1.05
DDR1-259ENST00000507046 PABPC5Q96DU9 382 aaKnown RBP21.62■■□□□ 1.05
DDR1-259ENST00000507046 DDX27Q96GQ7 796 aaKnown RBP21.62■■□□□ 1.05
DDR1-259ENST00000507046 IPO9Q96P70 1041 aaKnown RBP21.62■■□□□ 1.05
DDR1-259ENST00000507046 TSPAN18Q96SJ8 248 aa21.62■■□□□ 1.05
DDR1-259ENST00000507046 PAAF1Q9BRP4 392 aa21.62■■□□□ 1.05
DDR1-259ENST00000507046 VN1R3Q9BXE9 311 aa21.62■■□□□ 1.05
DDR1-259ENST00000507046 IGFLR1Q9H665 355 aa21.62■■□□□ 1.05
DDR1-259ENST00000507046 UBE2ZQ9H832 354 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms