RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 GLRA4Q5JXX5 417 aa14.8□□□□□ -0.04
DDX41-206ENST00000506965 SPECC1Q5M775 1068 aa14.8□□□□□ -0.04
DDX41-206ENST00000506965 NT5DC1Q5TFE4 455 aa14.8□□□□□ -0.04
DDX41-206ENST00000506965 FAM171A1Q5VUB5 890 aa14.8□□□□□ -0.04
DDX41-206ENST00000506965 CEP120Q8N960 986 aa14.8□□□□□ -0.04
DDX41-206ENST00000506965 GOLGA2P5Q9HBQ8 144 aa14.8□□□□□ -0.04
DDX41-206ENST00000506965 ARHGEF3Q9NR81 526 aa14.8□□□□□ -0.04
DDX41-206ENST00000506965 SLC2A4RGQ9NR83 387 aa14.8□□□□□ -0.04
DDX41-206ENST00000506965 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.8□□□□□ -0.04
DDX41-206ENST00000506965 I3L4J1 428 aa14.79□□□□□ -0.04
DDX41-206ENST00000506965 TADA2AO75478 443 aa14.79□□□□□ -0.04
DDX41-206ENST00000506965 SF3B1O75533 1304 aaKnown RBP eCLIP14.79□□□□□ -0.04
DDX41-206ENST00000506965 SEC24BO95487 1268 aa14.79□□□□□ -0.04
DDX41-206ENST00000506965 F5P12259 2224 aa14.79□□□□□ -0.04
DDX41-206ENST00000506965 XRCC6P12956 609 aaKnown RBP eCLIP14.79□□□□□ -0.04
DDX41-206ENST00000506965 XBP1P17861 261 aa14.79□□□□□ -0.04
DDX41-206ENST00000506965 FSHRP23945 695 aa14.79□□□□□ -0.04
DDX41-206ENST00000506965 MCM7P33993 719 aa14.79□□□□□ -0.04
DDX41-206ENST00000506965 NBR1Q14596 966 aa14.79□□□□□ -0.04
DDX41-206ENST00000506965 PSMD5Q16401 504 aa14.79□□□□□ -0.04
DDX41-206ENST00000506965 PHLDB3Q6NSJ2 640 aa14.79□□□□□ -0.04
DDX41-206ENST00000506965 STAMQ92783 540 aa14.79□□□□□ -0.04
DDX41-206ENST00000506965 FGF13Q92913 245 aa14.79□□□□□ -0.04
DDX41-206ENST00000506965 PIDD1Q9HB75 910 aa14.79□□□□□ -0.04
DDX41-206ENST00000506965 PRMT7Q9NVM4 692 aaPredicted RBP14.79□□□□□ -0.04
DDX41-206ENST00000506965 PRKCBP05771 671 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 C8AP07357 584 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 SP9P0CG40 484 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 ATP2B1P20020 1258 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 STARD6P59095 220 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 ANAPC15P60006 121 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 SLC5A9Q2M3M2 681 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 TAS1R3Q7RTX0 852 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 CEP57Q86XR8 500 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 C4orf32Q8N8J7 132 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 PJA1Q8NG27 643 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 PRIMPOLQ96LW4 560 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 PPP1R10Q96QC0 940 aaKnown RBP14.78□□□□□ -0.04
DDX41-206ENST00000506965 TTPALQ9BTX7 342 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 POLR3CQ9BUI4 534 aaPredicted RBP14.78□□□□□ -0.04
DDX41-206ENST00000506965 DDX23Q9BUQ8 820 aaKnown RBP14.78□□□□□ -0.04
DDX41-206ENST00000506965 PLA2G2FQ9BZM2 168 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 TUFT1Q9NNX1 390 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.78□□□□□ -0.04
DDX41-206ENST00000506965 DNMT3BQ9UBC3 853 aaKnown RBP14.78□□□□□ -0.04
DDX41-206ENST00000506965 CDH7Q9ULB5 785 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 GDAQ9Y2T3 454 aa14.78□□□□□ -0.04
DDX41-206ENST00000506965 NCOR2Q9Y618 2525 aa14.77□□□□□ -0.04
DDX41-206ENST00000506965 NCANO14594 1321 aa14.77□□□□□ -0.04
DDX41-206ENST00000506965 ACKR2O00590 384 aa14.77□□□□□ -0.05
DDX41-206ENST00000506965 ABLIM1O14639 778 aa14.77□□□□□ -0.05
DDX41-206ENST00000506965 CYP11B2P19099 503 aa14.77□□□□□ -0.05
DDX41-206ENST00000506965 FGFR3P22607 806 aa14.77□□□□□ -0.05
DDX41-206ENST00000506965 TKTP29401 623 aaKnown RBP14.77□□□□□ -0.05
DDX41-206ENST00000506965 BRCC3P46736 316 aa14.77□□□□□ -0.05
DDX41-206ENST00000506965 CLCNKBP51801 687 aa14.77□□□□□ -0.05
DDX41-206ENST00000506965 DCLRE1AQ6PJP8 1040 aa14.77□□□□□ -0.05
DDX41-206ENST00000506965 PADI6Q6TGC4 694 aa14.77□□□□□ -0.05
DDX41-206ENST00000506965 NPAS3Q8IXF0 933 aa14.77□□□□□ -0.05
DDX41-206ENST00000506965 DAW1Q8N136 415 aa14.77□□□□□ -0.05
DDX41-206ENST00000506965 DCLK2Q8N568 766 aa14.77□□□□□ -0.05
DDX41-206ENST00000506965 SLC7A14Q8TBB6 771 aa14.77□□□□□ -0.05
DDX41-206ENST00000506965 NXPE3Q969Y0 559 aa14.77□□□□□ -0.05
DDX41-206ENST00000506965 RMDN1Q96DB5 314 aa14.77□□□□□ -0.05
DDX41-206ENST00000506965 DDX27Q96GQ7 796 aaKnown RBP14.77□□□□□ -0.05
DDX41-206ENST00000506965 ZMAT2Q96NC0 199 aaKnown RBP14.77□□□□□ -0.05
DDX41-206ENST00000506965 KXD1Q9BQD3 176 aa14.77□□□□□ -0.05
DDX41-206ENST00000506965 MTRRQ9UBK8 725 aa14.77□□□□□ -0.05
DDX41-206ENST00000506965 KIF26AQ9ULI4 1882 aaPredicted RBP14.76□□□□□ -0.05
DDX41-206ENST00000506965 TSC2P49815 1807 aa14.76□□□□□ -0.05
DDX41-206ENST00000506965 N4BP3O15049 544 aa14.76□□□□□ -0.05
DDX41-206ENST00000506965 NR1I2O75469 434 aa14.76□□□□□ -0.05
DDX41-206ENST00000506965 THP07101 528 aa14.76□□□□□ -0.05
DDX41-206ENST00000506965 CD72P21854 359 aa14.76□□□□□ -0.05
DDX41-206ENST00000506965 RPA1P27694 616 aa14.76□□□□□ -0.05
DDX41-206ENST00000506965 OR1D2P34982 312 aa14.76□□□□□ -0.05
DDX41-206ENST00000506965 NCBP1Q09161 790 aaKnown RBP14.76□□□□□ -0.05
DDX41-206ENST00000506965 PRPF4BQ13523 1007 aaKnown RBP14.76□□□□□ -0.05
DDX41-206ENST00000506965 SNW1Q13573 536 aaKnown RBP14.76□□□□□ -0.05
DDX41-206ENST00000506965 RAB33AQ14088 237 aa14.76□□□□□ -0.05
DDX41-206ENST00000506965 ZNF174Q15697 407 aa14.76□□□□□ -0.05
DDX41-206ENST00000506965 SUMF1Q8NBK3 374 aa14.76□□□□□ -0.05
DDX41-206ENST00000506965 MCPH1Q8NEM0 835 aa14.76□□□□□ -0.05
DDX41-206ENST00000506965 ING5Q8WYH8 240 aa14.76□□□□□ -0.05
DDX41-206ENST00000506965 WASF1Q92558 559 aa14.76□□□□□ -0.05
DDX41-206ENST00000506965 SIT1Q9Y3P8 196 aa14.76□□□□□ -0.05
DDX41-206ENST00000506965 SPTBN2O15020 2390 aa14.75□□□□□ -0.05
DDX41-206ENST00000506965 MED19A0JLT2 244 aaPredicted RBP14.75□□□□□ -0.05
DDX41-206ENST00000506965 TMEM189-UBE2V1I3L0A0 370 aa14.75□□□□□ -0.05
DDX41-206ENST00000506965 STK25O00506 426 aa14.75□□□□□ -0.05
DDX41-206ENST00000506965 HNRNPA1P09651 372 aaKnown RBP eCLIP14.75□□□□□ -0.05
DDX41-206ENST00000506965 LIG1P18858 919 aa14.75□□□□□ -0.05
DDX41-206ENST00000506965 FCARP24071 287 aa14.75□□□□□ -0.05
DDX41-206ENST00000506965 HOXA9P31269 272 aa14.75□□□□□ -0.05
DDX41-206ENST00000506965 NAMPTP43490 491 aa14.75□□□□□ -0.05
DDX41-206ENST00000506965 ID4P47928 161 aa14.75□□□□□ -0.05
DDX41-206ENST00000506965 MAPK7Q13164 816 aa14.75□□□□□ -0.05
DDX41-206ENST00000506965 FZD5Q13467 585 aa14.75□□□□□ -0.05
DDX41-206ENST00000506965 IL17AQ16552 155 aa14.75□□□□□ -0.05
DDX41-206ENST00000506965 UPP1Q16831 310 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms