RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 UBQLN1Q9UMX0 589 aaKnown RBP9.21□□□□□ -0.94
PDGFC-205ENST00000506880 FRMD4BQ9Y2L6 1034 aa9.21□□□□□ -0.94
PDGFC-205ENST00000506880 SSUH2Q9Y2M2 353 aa9.21□□□□□ -0.94
PDGFC-205ENST00000506880 CETN3O15182 167 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 PMM2O15305 246 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 RECQL4O94761 1208 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 ALDH2P05091 517 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 MYBP10242 640 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 CCNE1P24864 410 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 ADSSP30520 456 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 LRPAP1P30533 357 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 BMPR1AP36894 532 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 MATR3P43243 847 aaKnown RBP eCLIP9.2□□□□□ -0.94
PDGFC-205ENST00000506880 CLDN10P78369 228 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 RNASELQ05823 741 aaKnown RBP9.2□□□□□ -0.94
PDGFC-205ENST00000506880 PNOCQ13519 176 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 ZCWPW2Q504Y3 356 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 CLLU1OSQ5K130 101 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 PPP2R2DQ66LE6 453 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 ADSSL1Q8N142 457 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 STAMQ92783 540 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 CPB2Q96IY4 423 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 PPP1R10Q96QC0 940 aaKnown RBP9.2□□□□□ -0.94
PDGFC-205ENST00000506880 PPP1R16BQ96T49 567 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 COLEC11Q9BWP8 271 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 EIF2AQ9BY44 585 aaKnown RBP9.2□□□□□ -0.94
PDGFC-205ENST00000506880 NAT10Q9H0A0 1025 aaKnown RBP9.2□□□□□ -0.94
PDGFC-205ENST00000506880 SLC39A2Q9NP94 309 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 RNF19AQ9NV58 838 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 ANO10Q9NW15 660 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 ANKFY1Q9P2R3 1169 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 MAFFQ9ULX9 164 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 IRAK3Q9Y616 596 aa9.2□□□□□ -0.94
PDGFC-205ENST00000506880 KIAA1671Q9BY89 1806 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 LINC01553A4QN01 128 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 TBKBP1A7MCY6 615 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 H3BNC9 293 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 TGFB1I1O43294 461 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 CSDE1O75534 798 aaKnown RBP9.19□□□□□ -0.94
PDGFC-205ENST00000506880 PRPF6O94906 941 aaKnown RBP9.19□□□□□ -0.94
PDGFC-205ENST00000506880 STAU1O95793 577 aaKnown RBP9.19□□□□□ -0.94
PDGFC-205ENST00000506880 FGFR4P22455 802 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 PSMC2P35998 433 aaKnown RBP9.19□□□□□ -0.94
PDGFC-205ENST00000506880 CASP5P51878 434 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 MARSP56192 900 aaKnown RBP9.19□□□□□ -0.94
PDGFC-205ENST00000506880 TAP1Q03518 808 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 PSMD6Q15008 389 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 ZBTB6Q15916 424 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 TCTN1Q2MV58 587 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 ZC2HC1CQ53FD0 456 aaPredicted RBP9.19□□□□□ -0.94
PDGFC-205ENST00000506880 EEF1DP3Q658K8 133 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 SLC39A4Q6P5W5 647 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 DCLRE1AQ6PJP8 1040 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 WDR49Q8IV35 697 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 FAM114A1Q8IWE2 563 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 TMEM192Q8IY95 271 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 LRRC52Q8N7C0 313 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 FBXO22Q8NEZ5 403 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 BEST2Q8NFU1 509 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 CHAMP1Q96JM3 812 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 MFSD14AQ96MC6 490 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 CDCA3Q99618 268 aaPredicted RBP9.19□□□□□ -0.94
PDGFC-205ENST00000506880 OSBPL7Q9BZF2 842 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 DNAI2Q9GZS0 605 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 NXF3Q9H4D5 531 aaKnown RBP9.19□□□□□ -0.94
PDGFC-205ENST00000506880 ZNF576Q9H609 170 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 NGRNQ9NPE2 291 aaKnown RBP9.19□□□□□ -0.94
PDGFC-205ENST00000506880 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.19□□□□□ -0.94
PDGFC-205ENST00000506880 TBC1D13Q9NVG8 400 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 SPG21Q9NZD8 308 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 HSPBP1Q9NZL4 362 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 PARP2Q9UGN5 583 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 DPP7Q9UHL4 492 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 RWDD2AQ9UIY3 292 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 MAN1B1Q9UKM7 699 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 ITGA11Q9UKX5 1188 aa9.19□□□□□ -0.94
PDGFC-205ENST00000506880 SMIM28A0A1B0GU29 152 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 SYN3O14994 580 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 P4HA2O15460 535 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 EXOC3O60645 756 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 N4BP1O75113 896 aaKnown RBP9.18□□□□□ -0.94
PDGFC-205ENST00000506880 SF3B1O75533 1304 aaKnown RBP eCLIP9.18□□□□□ -0.94
PDGFC-205ENST00000506880 NR3C1P04150 777 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 EPB41P11171 864 aaKnown RBP9.18□□□□□ -0.94
PDGFC-205ENST00000506880 ATICP31939 592 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 HOXD13P35453 343 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 PRCPP42785 496 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 NLRP12P59046 1061 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 PAK1Q13153 545 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 SNRNP35Q16560 246 aaKnown RBP9.18□□□□□ -0.94
PDGFC-205ENST00000506880 DUOXA2Q1HG44 320 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 SLC10A6Q3KNW5 377 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 TIGD5Q53EQ6 642 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 SPATA1Q5VX52 437 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 ELMSAN1Q6PJG2 1045 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 SASS6Q6UVJ0 657 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 KCNT2Q6UVM3 1135 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 DPH6Q7L8W6 267 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 FRMD5Q7Z6J6 570 aa9.18□□□□□ -0.94
PDGFC-205ENST00000506880 FILIP1Q7Z7B0 1213 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms