RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 MAN2A2P49641 1150 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 SCNN1GP51170 649 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 PER3P56645 1201 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 RRP1BQ14684 758 aaKnown RBP3.82□□□□□ -1.8
GYPB-207ENST00000506679 VPS72Q15906 364 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 SPDYAQ5MJ70 313 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 ATAT1Q5SQI0 421 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 DACT2Q5SW24 774 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 NXNQ6DKJ4 435 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 B3GNT9Q6UX72 402 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 USP45Q70EL2 814 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 CATIPQ7Z7H3 387 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 PLXDC1Q8IUK5 500 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 RHOT1Q8IXI2 618 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 DCBLD1Q8N8Z6 715 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 FBXO18Q8NFZ0 1043 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 KAT5Q92993 513 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 MNTQ99583 582 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 CPPED1Q9BRF8 314 aaPredicted RBP3.82□□□□□ -1.8
GYPB-207ENST00000506679 GTPBP4Q9BZE4 634 aaKnown RBP3.82□□□□□ -1.8
GYPB-207ENST00000506679 SENP6Q9GZR1 1112 aaPredicted RBP3.82□□□□□ -1.8
GYPB-207ENST00000506679 ZNF703Q9H7S9 590 aaPredicted RBP3.82□□□□□ -1.8
GYPB-207ENST00000506679 TDP1Q9NUW8 608 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 TMEM140Q9NV12 185 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 AURKAIP1Q9NWT8 199 aaPredicted RBP3.82□□□□□ -1.8
GYPB-207ENST00000506679 CALCOCO1Q9P1Z2 691 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 CLCA2Q9UQC9 943 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 PCDHA13Q9Y5I0 950 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 ACTL7AQ9Y615 435 aa3.82□□□□□ -1.8
GYPB-207ENST00000506679 XDHP47989 1333 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 TEX33O43247 280 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 HSP90B1P14625 803 aaKnown RBP3.81□□□□□ -1.8
GYPB-207ENST00000506679 LPOP22079 712 aaPredicted RBP3.81□□□□□ -1.8
GYPB-207ENST00000506679 CYP2C19P33261 490 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 BUD31P41223 144 aaPredicted RBP3.81□□□□□ -1.8
GYPB-207ENST00000506679 CLRN1P58418 232 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 CTXN1P60606 82 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 PTH1RQ03431 593 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 TLE1Q04724 770 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 RAB39AQ14964 217 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 PPP2R5AQ15172 486 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 LRRC41Q15345 812 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 FAM102BQ5T8I3 360 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 METRNLQ641Q3 311 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 PPP4R3AQ6IN85 833 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 EPM2AIP1Q7L775 607 aaPredicted RBP3.81□□□□□ -1.8
GYPB-207ENST00000506679 TMPRSS6Q8IU80 811 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 SYT12Q8IV01 421 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 PALM2Q8IXS6 379 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 TCEAL8Q8IYN2 117 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 MB21D1Q8N884 522 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 IL17DQ8TAD2 202 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 CCHCR1Q8TD31 782 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 ATXN2LQ8WWM7 1075 aaKnown RBP3.81□□□□□ -1.8
GYPB-207ENST00000506679 HPS3Q969F9 1004 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 MRI1Q9BV20 369 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 GPR87Q9BY21 358 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 EPC1Q9H2F5 836 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 CEP72Q9P209 647 aa3.81□□□□□ -1.8
GYPB-207ENST00000506679 GOLGA6L6A8MZA4 724 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 PRR5-ARHGAP8B1AHC4 643 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 SLC16A6O15403 523 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 TSPAN6O43657 245 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 DTNBO60941 627 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 HK1P19367 917 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 GTF2H3Q13889 308 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 TOB2Q14106 344 aaPredicted RBP3.8□□□□□ -1.8
GYPB-207ENST00000506679 CXorf57Q6NSI4 855 aaKnown RBP3.8□□□□□ -1.8
GYPB-207ENST00000506679 RNF207Q6ZRF8 634 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 TTC7BQ86TV6 843 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 TPH2Q8IWU9 490 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 DRC7Q8IY82 874 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 GSPT2Q8IYD1 628 aaKnown RBP3.8□□□□□ -1.8
GYPB-207ENST00000506679 STON2Q8WXE9 905 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 RAB24Q969Q5 203 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 MVB12AQ96EY5 273 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 TMX3Q96JJ7 454 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 MYOCQ99972 504 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 NDC1Q9BTX1 674 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 KRTAP9-3Q9BYQ3 159 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 G3BP2Q9UN86 482 aaKnown RBP3.8□□□□□ -1.8
GYPB-207ENST00000506679 HDAC5Q9UQL6 1122 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 CHST2Q9Y4C5 530 aa3.8□□□□□ -1.8
GYPB-207ENST00000506679 NT5C1B-RDH14C9J2C7 533 aa3.79□□□□□ -1.8
GYPB-207ENST00000506679 LEFTY2O00292 366 aa3.79□□□□□ -1.8
GYPB-207ENST00000506679 TRIM24O15164 1050 aa3.79□□□□□ -1.8
GYPB-207ENST00000506679 PRPF3O43395 683 aaKnown RBP3.79□□□□□ -1.8
GYPB-207ENST00000506679 RPLP2P05387 115 aaKnown RBP3.79□□□□□ -1.8
GYPB-207ENST00000506679 RAP2AP10114 183 aa3.79□□□□□ -1.8
GYPB-207ENST00000506679 ATP5JP18859 108 aa3.79□□□□□ -1.8
GYPB-207ENST00000506679 MGAT1P26572 445 aa3.79□□□□□ -1.8
GYPB-207ENST00000506679 ZNF280AP59817 542 aaPredicted RBP3.79□□□□□ -1.8
GYPB-207ENST00000506679 PGS1Q32NB8 556 aa3.79□□□□□ -1.8
GYPB-207ENST00000506679 USP39Q53GS9 565 aaKnown RBP3.79□□□□□ -1.8
GYPB-207ENST00000506679 ATXN7L2Q5T6C5 722 aaPredicted RBP3.79□□□□□ -1.8
GYPB-207ENST00000506679 FAM102AQ5T9C2 384 aaPredicted RBP3.79□□□□□ -1.8
GYPB-207ENST00000506679 EFCAB12Q6NXP0 572 aa3.79□□□□□ -1.8
GYPB-207ENST00000506679 CHPFQ8IZ52 775 aa3.79□□□□□ -1.8
GYPB-207ENST00000506679 MAGEB6Q8N7X4 407 aa3.79□□□□□ -1.8
GYPB-207ENST00000506679 RNF169Q8NCN4 708 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms